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 Learning Graphical Models


Unbounded Bayesian Optimization via Regularization

arXiv.org Machine Learning

Bayesian optimization has recently emerged as a popular and efficient tool for global optimization and hyperparameter tuning. Currently, the established Bayesian optimization practice requires a user-defined bounding box which is assumed to contain the optimizer. However, when little is known about the probed objective function, it can be difficult to prescribe such bounds. In this work we modify the standard Bayesian optimization framework in a principled way to allow automatic resizing of the search space. We introduce two alternative methods and compare them on two common synthetic benchmarking test functions as well as the tasks of tuning the stochastic gradient descent optimizer of a multi-layered perceptron and a convolutional neural network on MNIST.


Neyman-Pearson Classification under High-Dimensional Settings

arXiv.org Machine Learning

Most existing binary classification methods target on the optimization of the overall classification risk and may fail to serve some real-world applications such as cancer diagnosis, where users are more concerned with the risk of misclassifying one specific class than the other. Neyman-Pearson (NP) paradigm was introduced in this context as a novel statistical framework for handling asymmetric type I/II error priorities. It seeks classifiers with a minimal type II error and a constrained type I error under a user specified level. This article is the first attempt to construct classifiers with guaranteed theoretical performance under the NP paradigm in high-dimensional settings. Based on the fundamental Neyman-Pearson Lemma, we used a plug-in approach to construct NP-type classifiers for Naive Bayes models. The proposed classifiers satisfy the NP oracle inequalities, which are natural NP paradigm counterparts of the oracle inequalities in classical binary classification. Besides their desirable theoretical properties, we also demonstrated their numerical advantages in prioritized error control via both simulation and real data studies.


A model selection approach for clustering a multinomial sequence with non-negative factorization

arXiv.org Machine Learning

We consider a problem of clustering a sequence of multinomial observations by way of a model selection criterion. We propose a form of a penalty term for the model selection procedure. Our approach subsumes both the conventional AIC and BIC criteria but also extends the conventional criteria in a way that it can be applicable also to a sequence of sparse multinomial observations, where even within a same cluster, the number of multinomial trials may be different for different observations. In addition, as a preliminary estimation step to maximum likelihood estimation, and more generally, to maximum $L_{q}$ estimation, we propose to use reduced rank projection in combination with non-negative factorization. We motivate our approach by showing that our model selection criterion and preliminary estimation step yield consistent estimates under simplifying assumptions. We also illustrate our approach through numerical experiments using real and simulated data.


RCR: Robust Compound Regression for Robust Estimation of Errors-in-Variables Model

arXiv.org Machine Learning

The errors-in-variables (EIV) regression model, being more realistic by accounting for measurement errors in both the dependent and the independent variables, is widely adopted in applied sciences. The traditional EIV model estimators, however, can be highly biased by outliers and other departures from the underlying assumptions. In this paper, we develop a novel nonparametric regression approach - the robust compound regression (RCR) analysis method for the robust estimation of EIV models. We first introduce a robust and efficient estimator called least sine squares (LSS). Taking full advantage of both the new LSS method and the compound regression analysis method developed in our own group, we subsequently propose the RCR approach as a generalization of those two, which provides a robust counterpart of the entire class of the maximum likelihood estimation (MLE) solutions of the EIV model, in a 1-1 mapping. Technically, our approach gives users the flexibility to select from a class of RCR estimates the optimal one with a predefined regression efficiency criterion satisfied. Simulation studies and real-life examples are provided to illustrate the effectiveness of the RCR approach.


Bayesian Dropout

arXiv.org Machine Learning

Dropout has recently emerged as a powerful and simple method for training neural networks preventing co-adaptation by stochastically omitting neurons. Dropout is currently not grounded in explicit modelling assumptions which so far has precluded its adoption in Bayesian modelling. Using Bayesian entropic reasoning we show that dropout can be interpreted as optimal inference under constraints. We demonstrate this on an analytically tractable regression model providing a Bayesian interpretation of its mechanism for regularizing and preventing co-adaptation as well as its connection to other Bayesian techniques. We also discuss two general approximate techniques for applying Bayesian dropout for general models, one based on an analytical approximation and the other on stochastic variational techniques. These techniques are then applied to a Baysian logistic regression problem and are shown to improve performance as the model become more misspecified. Our framework roots dropout as a theoretically justified and practical tool for statistical modelling allowing Bayesians to tap into the benefits of dropout training.


Alternating Minimization Algorithm with Automatic Relevance Determination for Transmission Tomography under Poisson Noise

arXiv.org Machine Learning

We propose a globally convergent alternating minimization (AM) algorithm for image reconstruction in transmission tomography, which extends automatic relevance determination (ARD) to Poisson noise models with Beer's law. The algorithm promotes solutions that are sparse in the pixel/voxel-differences domain by introducing additional latent variables, one for each pixel/voxel, and then learning these variables from the data using a hierarchical Bayesian model. Importantly, the proposed AM algorithm is free of any tuning parameters with image quality comparable to standard penalized likelihood methods. Our algorithm exploits optimization transfer principles which reduce the problem into parallel 1D optimization tasks (one for each pixel/voxel), making the algorithm feasible for large-scale problems. This approach considerably reduces the computational bottleneck of ARD associated with the posterior variances. Positivity constraints inherent in transmission tomography problems are also enforced. We demonstrate the performance of the proposed algorithm for x-ray computed tomography using synthetic and real-world datasets. The algorithm is shown to have much better performance than prior ARD algorithms based on approximate Gaussian noise models, even for high photon flux.


Beyond Bell's Theorem II: Scenarios with arbitrary causal structure

arXiv.org Machine Learning

It has recently been found that Bell scenarios are only a small subclass of interesting setups for studying the nonclassical features of quantum theory within spacetime. We find that it is possible to talk about classical correlations, quantum correlations and other kinds of correlations on any directed acyclic graph, and this captures various extensions of Bell scenarios which have been considered in the literature. From a conceptual point of view, the main feature of our approach is its high level of unification: while the notions of source, choice of setting and measurement play all seemingly different roles in a Bell scenario, our formalism shows that they are all instances of the same concept of "event". Our work can also be understood as a contribution to the subject of causal inference with latent variables. Among other things, we introduce hidden Bayesian networks as a generalization of hidden Markov models. Contents 1. Introduction 2 2. What is causal structure?


Crime Prediction Based On Crime Types And Using Spatial And Temporal Criminal Hotspots

arXiv.org Artificial Intelligence

This paper focuses on finding spatial and temporal criminal hotspots. It analyses two different real-world crimes datasets for Denver, CO and Los Angeles, CA and provides a comparison between the two datasets through a statistical analysis supported by several graphs. Then, it clarifies how we conducted Apriori algorithm to produce interesting frequent patterns for criminal hotspots. In addition, the paper shows how we used Decision Tree classifier and Naive Bayesian classifier in order to predict potential crime types. To further analyse crimes datasets, the paper introduces an analysis study by combining our findings of Denver crimes dataset with its demographics information in order to capture the factors that might affect the safety of neighborhoods. The results of this solution could be used to raise awareness regarding the dangerous locations and to help agencies to predict future crimes in a specific location within a particular time.


Dimension reduction for model-based clustering

arXiv.org Machine Learning

We introduce a dimension reduction method for visualizing the clustering structure obtained from a finite mixture of Gaussian densities. Information on the dimension reduction subspace is obtained from the variation on group means and, depending on the estimated mixture model, on the variation on group covariances. The proposed method aims at reducing the dimensionality by identifying a set of linear combinations, ordered by importance as quantified by the associated eigenvalues, of the original features which capture most of the cluster structure contained in the data. Observations may then be projected onto such a reduced subspace, thus providing summary plots which help to visualize the clustering structure. These plots can be particularly appealing in the case of high-dimensional data and noisy structure. The new constructed variables capture most of the clustering information available in the data, and they can be further reduced to improve clustering performance. We illustrate the approach on both simulated and real data sets.


Sublinear Partition Estimation

arXiv.org Machine Learning

The output scores of a neural network classifier are converted to probabilities via normalizing over the scores of all competing categories. Computing this partition function, $Z$, is then linear in the number of categories, which is problematic as real-world problem sets continue to grow in categorical types, such as in visual object recognition or discriminative language modeling. We propose three approaches for sublinear estimation of the partition function, based on approximate nearest neighbor search and kernel feature maps and compare the performance of the proposed approaches empirically.