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 Learning Graphical Models


Inferring Missing Categorical Information in Noisy and Sparse Web Markup

arXiv.org Machine Learning

Embedded markup of Web pages has seen widespread adoption throughout the past years driven by standards such as RDFa and Microdata and initiatives such as schema.org, where recent studies show an adoption by 39% of all Web pages already in 2016. While this constitutes an important information source for tasks such as Web search, Web page classification or knowledge graph augmentation, individual markup nodes are usually sparsely described and often lack essential information. For instance, from 26 million nodes describing events within the Common Crawl in 2016, 59% of nodes provide less than six statements and only 257,000 nodes (0.96%) are typed with more specific event subtypes. Nevertheless, given the scale and diversity of Web markup data, nodes that provide missing information can be obtained from the Web in large quantities, in particular for categorical properties. Such data constitutes potential training data for inferring missing information to significantly augment sparsely described nodes. In this work, we introduce a supervised approach for inferring missing categorical properties in Web markup. Our experiments, conducted on properties of events and movies, show a performance of 79% and 83% F1 score correspondingly, significantly outperforming existing baselines.


Inverse Reinforcement Learning via Nonparametric Spatio-Temporal Subgoal Modeling

arXiv.org Machine Learning

Recent advances in the field of inverse reinforcement learning (IRL) have yielded sophisticated frameworks which relax the original modeling assumption that the behavior of an observed agent reflects only a single intention. Instead, the demonstration data is typically divided into parts, to account for the fact that different trajectories may correspond to different intentions, e.g., because they were generated by different domain experts. In this work, we go one step further: using the intuitive concept of subgoals, we build upon the premise that even a single trajectory can be explained more efficiently locally within a certain context than globally, enabling a more compact representation of the observed behavior. Based on this assumption, we build an implicit intentional model of the agent's goals to forecast its behavior in unobserved situations. The result is an integrated Bayesian prediction framework which provides smooth policy estimates that are consistent with the expert's plan and significantly outperform existing IRL solutions. Most notably, our framework naturally handles situations where the intentions of the agent change with time and classical IRL algorithms fail. In addition, due to its probabilistic nature, the model can be straightforwardly applied in an active learning setting to guide the demonstration process of the expert.


Model-Based Clustering and Classification of Functional Data

arXiv.org Machine Learning

The problem of complex data analysis is a central topic of modern statistical science and learning systems and is becoming of broader interest with the increasing prevalence of high-dimensional data. The challenge is to develop statistical models and autonomous algorithms that are able to acquire knowledge from raw data for exploratory analysis, which can be achieved through clustering techniques or to make predictions of future data via classification (i.e., discriminant analysis) techniques. Latent data models, including mixture model-based approaches are one of the most popular and successful approaches in both the unsupervised context (i.e., clustering) and the supervised one (i.e, classification or discrimination). Although traditionally tools of multivariate analysis, they are growing in popularity when considered in the framework of functional data analysis (FDA). FDA is the data analysis paradigm in which the individual data units are functions (e.g., curves, surfaces), rather than simple vectors. In many areas of application, the analyzed data are indeed often available in the form of discretized values of functions or curves (e.g., time series, waveforms) and surfaces (e.g., 2d-images, spatio-temporal data). This functional aspect of the data adds additional difficulties compared to the case of a classical multivariate (non-functional) data analysis. We review and present approaches for model-based clustering and classification of functional data. We derive well-established statistical models along with efficient algorithmic tools to address problems regarding the clustering and the classification of these high-dimensional data, including their heterogeneity, missing information, and dynamical hidden structure. The presented models and algorithms are illustrated on real-world functional data analysis problems from several application area.


Evaluating Overfit and Underfit in Models of Network Community Structure

arXiv.org Machine Learning

A common data mining task on networks is community detection, which seeks an unsupervised decomposition of a network into structural groups based on statistical regularities in the network's connectivity. Although many methods exist, the No Free Lunch theorem for community detection implies that each makes some kind of tradeoff, and no algorithm can be optimal on all inputs. Thus, different algorithms will over or underfit on different inputs, finding more, fewer, or just different communities than is optimal, and evaluation methods that use a metadata partition as a ground truth will produce misleading conclusions about general accuracy. Here, we present a broad evaluation of over and underfitting in community detection, comparing the behavior of 16 state-of-the-art community detection algorithms on a novel and structurally diverse corpus of 406 real-world networks. We find that (i) algorithms vary widely both in the number of communities they find and in their corresponding composition, given the same input, (ii) algorithms can be clustered into distinct high-level groups based on similarities of their outputs on real-world networks, and (iii) these differences induce wide variation in accuracy on link prediction and link description tasks. We introduce a new diagnostic for evaluating overfitting and underfitting in practice, and use it to roughly divide community detection methods into general and specialized learning algorithms. Across methods and inputs, Bayesian techniques based on the stochastic block model and a minimum description length approach to regularization represent the best general learning approach, but can be outperformed under specific circumstances. These results introduce both a theoretically principled approach to evaluate over and underfitting in models of network community structure and a realistic benchmark by which new methods may be evaluated and compared.


This AI-augmented microscope uses deep learning to take on cancer

#artificialintelligence

According to the American Cancer Society, cancer kills more than 8 million people each year. Early detection can boost survival rates. Researchers and clinicians are feverishly exploring avenues to provide early and accurate diagnoses, as well as more targeted treatments. Blood screenings are used to detect many types of cancers, including liver, ovarian, colon and lung cancers. Current blood screening methods typically rely on affixing biochemical labels to cells or biomolecules.


Multi-Instance Dynamic Ordinal Random Fields for Weakly-supervised Facial Behavior Analysis

arXiv.org Artificial Intelligence

We propose a Multi-Instance-Learning (MIL) approach for weakly-supervised learning problems, where a training set is formed by bags (sets of feature vectors or instances) and only labels at bag-level are provided. Specifically, we consider the Multi-Instance Dynamic-Ordinal-Regression (MI-DOR) setting, where the instance labels are naturally represented as ordinal variables and bags are structured as temporal sequences. To this end, we propose Multi-Instance Dynamic Ordinal Random Fields (MI-DORF). In this framework, we treat instance-labels as temporally-dependent latent variables in an Undirected Graphical Model. Different MIL assumptions are modelled via newly introduced high-order potentials relating bag and instance-labels within the energy function of the model. We also extend our framework to address the Partially-Observed MI-DOR problems, where a subset of instance labels are available during training. We show on the tasks of weakly-supervised facial behavior analysis, Facial Action Unit (DISFA dataset) and Pain (UNBC dataset) Intensity estimation, that the proposed framework outperforms alternative learning approaches. Furthermore, we show that MIDORF can be employed to reduce the data annotation efforts in this context by large-scale.


SQL-Rank: A Listwise Approach to Collaborative Ranking

arXiv.org Machine Learning

In this paper, we propose a listwise approach for constructing user-specific rankings in recommendation systems in a collaborative fashion. We contrast the listwise approach to previous pointwise and pairwise approaches, which are based on treating either each rating or each pairwise comparison as an independent instance respectively. By extending the work of (Cao et al., 2007), we cast listwise collaborative ranking as maximum likelihood under a permutation model which applies probability mass to permutations based on a low rank latent score matrix. We present a novel algorithm called SQL-Rank, which can accommodate ties and missing data and can run in linear time. We develop a theoretical framework for analyzing listwise ranking methods based on a novel representation theory for the permutation model. Applying this framework to collaborative ranking, we derive asymptotic statistical rates as the number of users and items grow together. We conclude by demonstrating that our SQL-Rank method often outperforms current state-of-the-art algorithms for implicit feedback such as Weighted-MF and BPR and achieve favorable results when compared to explicit feedback algorithms such as matrix factorization and collaborative ranking.


Approximate Inference for Constructing Astronomical Catalogs from Images

arXiv.org Machine Learning

We present a new, fully generative model for constructing astronomical catalogs from optical telescope image sets. Each pixel intensity is treated as a Poisson random variable with a rate parameter that depends on the latent properties of stars and galaxies. These latent properties are themselves random, with scientific prior distributions constructed from large ancillary datasets. We compare two procedures for posterior inference: Markov chain Monte Carlo (MCMC) and variational inference (VI). MCMC excels at quantifying uncertainty while VI is 1000x faster. Both procedures outperform the current state-of-the-art method for measuring celestial bodies' colors, shapes, and morphologies. On a supercomputer, the VI procedure efficiently uses 665,000 CPU cores (1.3 million hardware threads) to construct an astronomical catalog from 50 terabytes of images.


Modeling Activity Tracker Data Using Deep Boltzmann Machines

arXiv.org Machine Learning

Commercial activity trackers are set to become an essential tool in health research, due to increasing availability in the general population. The corresponding vast amounts of mostly unlabeled data pose a challenge to statistical modeling approaches. To investigate the feasibility of deep learning approaches for unsupervised learning with such data, we examine weekly usage patterns of Fitbit activity trackers with deep Boltzmann machines (DBMs). This method is particularly suitable for modeling complex joint distributions via latent variables. We also chose this specific procedure because it is a generative approach, i.e., artificial samples can be generated to explore the learned structure. We describe how the data can be preprocessed to be compatible with binary DBMs. The results reveal two distinct usage patterns in which one group frequently uses trackers on Mondays and Tuesdays, whereas the other uses trackers during the entire week. This exemplary result shows that DBMs are feasible and can be useful for modeling activity tracker data.


Statistical shape analysis in a Bayesian framework for shapes in two and three dimensions

arXiv.org Machine Learning

In this paper, we describe a novel shape classification method which is embedded in the Bayesian paradigm. We discuss the modelling and the resulting shape classification algorithm for two and three dimensional data shapes. We conclude by evaluating the efficiency and efficacy of the proposed algorithm on the Kimia shape database for the two dimensional case.