Humans make optimal perceptual decisions in noisy and ambiguous conditions. Computations underlying such optimal behavior have been shown to rely on probabilistic inference according to generative models whose structure is usually taken to be known a priori. We argue that Bayesian model selection is ideal for inferring similar and even more complex model structures from experience. We find in experiments that humans learn subtle statistical properties of visual scenes in a completely unsupervised manner. We show that these findings are well captured by Bayesian model learning within a class of models that seek to explain observed variables by independent hidden causes.

A standard method to obtain stochastic models for symbolic time series is to train state-emitting hidden Markov models (SE-HMMs) with the Baum-Welch algorithm. Based on observable operator models (OOMs), in the last few months a number of novel learning algorithms for similar purposes have been developed: (1,2) two versions of an "efficiency sharpening" (ES) algorithm, which iteratively improves the statistical efficiency of a sequence of OOM estimators, (3) a constrained gradient descent ML estimator for transition-emitting HMMs (TE-HMMs). We give an overview on these algorithms and compare them with SE-HMM/EM learning on synthetic and real-life data.

We develop an approach for estimation with Gaussian Markov processes that imposes a smoothness prior while allowing for discontinuities. In- stead of propagating information laterally between neighboring nodes in a graph, we study the posterior distribution of the hidden nodes as a whole--how it is perturbed by invoking discontinuities, or weakening the edges, in the graph. We show that the resulting computation amounts to feed-forward fan-in operations reminiscent of V1 neurons. Moreover, using suitable matrix preconditioners, the incurred matrix inverse and determinant can be approximated, without iteration, in the same compu- tational style. Simulation results illustrate the merits of this approach.

The misjudgement of tilt in images lies at the heart of entertaining visual illusions and rigorous perceptual psychophysics. A wealth of findings has attracted many mechanistic models, but few clear computational principles. We adopt a Bayesian approach to perceptual tilt estimation, showing how a smoothness prior offers a powerful way of addressing much confusing data. In particular, we faithfully model recent results showing that confidence in estimation can be systematically affected by the same aspects of images that affect bias. Confidence is central to Bayesian modeling approaches, and is applicable in many other perceptual domains. Perceptual anomalies and illusions, such as the misjudgements of motion and tilt evident in so many psychophysical experiments, have intrigued researchers for decades.13

The classical Bayes rule computes the posterior model probability from the prior probability and the data likelihood. We generalize this rule to the case when the prior is a density matrix (symmetric positive definite and trace one) and the data likelihood a covariance matrix. The classical Bayes rule is retained as the special case when the matrices are diagonal. In the classical setting, the calculation of the probability of the data is an expected likelihood, where the expectation is over the prior distribution. In the generalized setting, this is replaced by an expected variance calculation where the variance is computed along the eigenvectors of the prior density matrix and the expectation is over the eigenvalues of the density matrix (which form a probability vector).

This paper describes a highly successful application of MRFs to the problem of generating high-resolution range images. A new generation of range sensors combines the capture of low-resolution range images with the acquisition of registered high-resolution camera images. The MRF in this paper exploits the fact that discontinuities in range and coloring tend to co-align. This enables it to generate high-resolution, low-noise range images by integrating regular camera images into the range data. We show that by using such an MRF, we can substantially improve over existing range imaging technology.

Functional Magnetic Resonance Imaging (fMRI) has enabled scientists to look into the active brain. However, interactivity between functional brain regions, is still little studied. In this paper, we contribute a novel framework for modeling the interactions between multiple active brain regions, using Dynamic Bayesian Networks (DBNs) as generative mod- els for brain activation patterns. This framework is applied to modeling of neuronal circuits associated with reward. The novelty of our frame- work from a Machine Learning perspective lies in the use of DBNs to reveal the brain connectivity and interactivity. Such interactivity mod- els which are derived from fMRI data are then validated through a group classification task.

This activity often manifests itself as dynamically coordinated sequences of action potentials. Since multiple electrode recordings are now a standard tool in neuroscience research, it is important to have a measure of such network-wide behavioral coordination and information sharing, applicable to multiple neural spike train data. We propose a new statistic, informational coherence, which measures how much better one unit can be predicted by knowing the dynamical state of another. We argue informational coherence is a measure of association and shared information which is superior to traditional pairwise measures of synchronization and correlation. To find the dynamical states, we use a recently-introduced algorithm which reconstructs effective state spaces from stochastic time series.

We study the problem of parameter estimation in continuous density hidden Markov models (CD-HMMs) for automatic speech recognition (ASR). As in support vector machines, we propose a learning algorithm based on the goal of margin maximization. Unlike earlier work on max-margin Markov networks, our approach is specifically geared to the modeling of real-valued observations (such as acoustic feature vectors) using Gaussian mixture models. Unlike previous discriminative frameworks for ASR, such as maximum mutual information and minimum classification error, our framework leads to a convex optimization, without any spurious local minima. The objective function for large margin training of CD-HMMs is defined over a parameter space of positive semidefinite matrices.

We present a generalization of dynamic Bayesian networks to concisely describe complex probability distributions such as in problems with multiple interacting variable-length streams of random variables. Our framewor k incorporates recent graphical model constructs to account for existence uncert ainty, value-specific independence, aggregation relationships, and local and global constraints, while still retaining a Bayesian network interpretation and effic ient inference and learning techniques. We introduce one such general technique, which is an extension of Value Elimination, a backtracking search inference algo rithm. Multi-dynamic Bayesian networks are motivated by our work on Statistical Machine Translation (MT). We present results on MT word alignment in support of our claim that MDBNs are a promising framework for the rapid prototyping of new MT systems.