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 Markov Models


Lifted Symmetry Detection and Breaking for MAP Inference

Neural Information Processing Systems

Symmetry breaking is a technique for speeding up propositional satisfiability testing by adding constraints to the theory that restrict the search space while preserving satisfiability. In this work, we extend symmetry breaking to the problem of model finding in weighted and unweighted relational theories, a class of problems that includes MAP inference in Markov Logic and similar statistical-relational languages. We introduce term symmetries, which are induced by an evidence set and extend to symmetries over a relational theory. We provide the important special case of term equivalent symmetries, showing that such symmetries can be found in low-degree polynomial time. We show how to break an exponential number of these symmetries with added constraints whose number is linear in the size of the domain. We demonstrate the effectiveness of these techniques through experiments in two relational domains. We also discuss the connections between relational symmetry breaking and work on lifted inference in statistical-relational reasoning.


Scalable Adaptation of State Complexity for Nonparametric Hidden Markov Models

Neural Information Processing Systems

Bayesian nonparametric hidden Markov models are typically learned via fixed truncations of the infinite state space or local Monte Carlo proposals that make small changes to the state space. We develop an inference algorithm for the sticky hierarchical Dirichlet process hidden Markov model that scales to big datasets by processing a few sequences at a time yet allows rapid adaptation of the state space cardinality. Unlike previous point-estimate methods, our novel variational bound penalizes redundant or irrelevant states and thus enables optimization of the state space. Our birth proposals use observed data statistics to create useful new states that escape local optima. Merge and delete proposals remove ineffective states to yield simpler models with more affordable future computations. Experiments on speaker diarization, motion capture, and epigenetic chromatin datasets discover models that are more compact, more interpretable, and better aligned to ground truth segmentations than competitors. We have released an open-source Python implementation which can parallelize local inference steps across sequences.


Training Restricted Boltzmann Machine via the ๏ฟผThouless-Anderson-Palmer free energy

Neural Information Processing Systems

Restricted Boltzmann machines are undirected neural networks which have been shown tobe effective in many applications, including serving as initializations fortraining deep multi-layer neural networks. One of the main reasons for their success is theexistence of efficient and practical stochastic algorithms, such as contrastive divergence,for unsupervised training. We propose an alternative deterministic iterative procedure based on an improved mean field method from statistical physics known as the Thouless-Anderson-Palmer approach. We demonstrate that our algorithm provides performance equal to, and sometimes superior to, persistent contrastive divergence, while also providing a clear and easy to evaluate objective function. We believe that this strategycan be easily generalized to other models as well as to more accurate higher-order approximations, paving the way for systematic improvements in training Boltzmann machineswith hidden units.


Covariance-Controlled Adaptive Langevin Thermostat for Large-Scale Bayesian Sampling

Neural Information Processing Systems

Monte Carlo sampling for Bayesian posterior inference is a common approach used in machine learning. The Markov Chain Monte Carlo procedures that are used are often discrete-time analogues of associated stochastic differential equations (SDEs). These SDEs are guaranteed to leave invariant the required posterior distribution. An area of current research addresses the computational benefits of stochastic gradient methods in this setting. Existing techniques rely on estimating the variance or covariance of the subsampling error, and typically assume constant variance. In this article, we propose a covariance-controlled adaptive Langevin thermostat that can effectively dissipate parameter-dependent noise while maintaining a desired target distribution. The proposed method achieves a substantial speedup over popular alternative schemes for large-scale machine learning applications.


Deep Knowledge Tracing

Neural Information Processing Systems

Knowledge tracing, where a machine models the knowledge of a student as they interact with coursework, is an established and significantly unsolved problem in computer supported education.In this paper we explore the benefit of using recurrent neural networks to model student learning.This family of models have important advantages over current state of the art methods in that they do not require the explicit encoding of human domain knowledge,and have a far more flexible functional form which can capture substantially more complex student interactions.We show that these neural networks outperform the current state of the art in prediction on real student data,while allowing straightforward interpretation and discovery of structure in the curriculum.These results suggest a promising new line of research for knowledge tracing.


Individual Planning in Infinite-Horizon Multiagent Settings: Inference, Structure and Scalability

Neural Information Processing Systems

This paper provides the first formalization of self-interested planning in multiagent settings using expectation-maximization (EM). Our formalization in the context of infinite-horizon and finitely-nested interactive POMDPs (I-POMDP) is distinct from EM formulations for POMDPs and cooperative multiagent planning frameworks. We exploit the graphical model structure specific to I-POMDPs, and present a new approach based on block-coordinate descent for further speed up. Forward filtering-backward sampling -- a combination of exact filtering with sampling -- is explored to exploit problem structure.


Spectral Learning of Large Structured HMMs for Comparative Epigenomics

Neural Information Processing Systems

We develop a latent variable model and an efficient spectral algorithm motivated by the recent emergence of very large data sets of chromatin marks from multiple human cell types. A natural model for chromatin data in one cell type is a Hidden Markov Model (HMM); we model the relationship between multiple cell types by connecting their hidden states by a fixed tree of known structure. The main challenge with learning parameters of such models is that iterative methods such as EM are very slow, while naive spectral methods result in time and space complexity exponential in the number of cell types. We exploit properties of the tree structure of the hidden states to provide spectral algorithms that are more computationally efficient for current biological datasets. We provide sample complexity bounds for our algorithm and evaluate it experimentally on biological data from nine human cell types. Finally, we show that beyond our specific model, some of our algorithmic ideas can be applied to other graphical models.


Measuring Sample Quality with Stein's Method

Neural Information Processing Systems

To improve the efficiency of Monte Carlo estimation, practitioners are turning to biased Markov chain Monte Carlo procedures that trade off asymptotic exactness for computational speed. The reasoning is sound: a reduction in variance due to more rapid sampling can outweigh the bias introduced. However, the inexactness creates new challenges for sampler and parameter selection, since standard measures of sample quality like effective sample size do not account for asymptotic bias. To address these challenges, we introduce a new computable quality measure based on Stein's method that bounds the discrepancy between sample and target expectations over a large class of test functions. We use our tool to compare exact, biased, and deterministic sample sequences and illustrate applications to hyperparameter selection, convergence rate assessment, and quantifying bias-variance tradeoffs in posterior inference.


Bayes-Optimal Effort Allocation in Crowdsourcing: Bounds and Index Policies

arXiv.org Machine Learning

We consider effort allocation in crowdsourcing, where we wish to assign labeling tasks to imperfect homogeneous crowd workers to maximize overall accuracy in a continuous-time Bayesian setting, subject to budget and time constraints. The Bayes-optimal policy for this problem is the solution to a partially observable Markov decision process, but the curse of dimensionality renders the computation infeasible. Based on the Lagrangian Relaxation technique in Adelman & Mersereau (2008), we provide a computationally tractable instance-specific upper bound on the value of this Bayes-optimal policy, which can in turn be used to bound the optimality gap of any other sub-optimal policy. In an approach similar in spirit to the Whittle index for restless multiarmed bandits, we provide an index policy for effort allocation in crowdsourcing and demonstrate numerically that it outperforms other stateof- arts and performs close to optimal solution.


Sharp Computational-Statistical Phase Transitions via Oracle Computational Model

arXiv.org Machine Learning

We study the fundamental tradeoffs between computational tractability and statistical accuracy for a general family of hypothesis testing problems with combinatorial structures. Based upon an oracle model of computation, which captures the interactions between algorithms and data, we establish a general lower bound that explicitly connects the minimum testing risk under computational budget constraints with the intrinsic probabilistic and combinatorial structures of statistical problems. This lower bound mirrors the classical statistical lower bound by Le Cam (1986) and allows us to quantify the optimal statistical performance achievable given limited computational budgets in a systematic fashion. Under this unified framework, we sharply characterize the statistical-computational phase transition for two testing problems, namely, normal mean detection and sparse principal component detection. For normal mean detection, we consider two combinatorial structures, namely, sparse set and perfect matching. For these problems we identify significant gaps between the optimal statistical accuracy that is achievable under computational tractability constraints and the classical statistical lower bounds. Compared with existing works on computational lower bounds for statistical problems, which consider general polynomial-time algorithms on Turing machines, and rely on computational hardness hypotheses on problems like planted clique detection, we focus on the oracle computational model, which covers a broad range of popular algorithms, and do not rely on unproven hypotheses. Moreover, our result provides an intuitive and concrete interpretation for the intrinsic computational intractability of high-dimensional statistical problems. One byproduct of our result is a lower bound for a strict generalization of the matrix permanent problem, which is of independent interest.