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 Bayesian Learning


Generalisation of Total Uncertainty in AI: A Theoretical Study

arXiv.org Machine Learning

AI has been dealing with uncertainty to have highly accurate results. This becomes even worse with reasonably small data sets or a variation in the data sets. This has far-reaching effects on decision-making, forecasting and learning mechanisms. This study seeks to unpack the nature of uncertainty that exists within AI by drawing ideas from established works, the latest developments and practical applications and provide a novel total uncertainty definition in AI. From inception theories up to current methodologies, this paper provides an integrated view of dealing with better total uncertainty as well as complexities of uncertainty in AI that help us understand its meaning and value across different domains.


Alpha-VI DeepONet: A prior-robust variational Bayesian approach for enhancing DeepONets with uncertainty quantification

arXiv.org Artificial Intelligence

We introduce a novel deep operator network (DeepONet) framework that incorporates generalised variational inference (GVI) using R\'enyi's $\alpha$-divergence to learn complex operators while quantifying uncertainty. By incorporating Bayesian neural networks as the building blocks for the branch and trunk networks, our framework endows DeepONet with uncertainty quantification. The use of R\'enyi's $\alpha$-divergence, instead of the Kullback-Leibler divergence (KLD), commonly used in standard variational inference, mitigates issues related to prior misspecification that are prevalent in Variational Bayesian DeepONets. This approach offers enhanced flexibility and robustness. We demonstrate that modifying the variational objective function yields superior results in terms of minimising the mean squared error and improving the negative log-likelihood on the test set. Our framework's efficacy is validated across various mechanical systems, where it outperforms both deterministic and standard KLD-based VI DeepONets in predictive accuracy and uncertainty quantification. The hyperparameter $\alpha$, which controls the degree of robustness, can be tuned to optimise performance for specific problems. We apply this approach to a range of mechanics problems, including gravity pendulum, advection-diffusion, and diffusion-reaction systems. Our findings underscore the potential of $\alpha$-VI DeepONet to advance the field of data-driven operator learning and its applications in engineering and scientific domains.


Beat this! Accurate beat tracking without DBN postprocessing

arXiv.org Artificial Intelligence

We propose a system for tracking beats and downbeats with two objectives: generality across a diverse music range, and high accuracy. We achieve generality by training on multiple datasets -- including solo instrument recordings, pieces with time signature changes, and classical music with high tempo variations -- and by removing the commonly used Dynamic Bayesian Network (DBN) postprocessing, which introduces constraints on the meter and tempo. For high accuracy, among other improvements, we develop a loss function tolerant to small time shifts of annotations, and an architecture alternating convolutions with transformers either over frequency or time. Our system surpasses the current state of the art in F1 score despite using no DBN. However, it can still fail, especially for difficult and underrepresented genres, and performs worse on continuity metrics, so we publish our model, code, and preprocessed datasets, and invite others to beat this.


Empirical Bayes Linked Matrix Decomposition

arXiv.org Artificial Intelligence

Data for several applications in diverse fields can be represented as multiple matrices that are linked across rows or columns. This is particularly common in molecular biomedical research, in which multiple molecular "omics" technologies may capture different feature sets (e.g., corresponding to rows in a matrix) and/or different sample populations (corresponding to columns). This has motivated a large body of work on integrative matrix factorization approaches that identify and decompose low-dimensional signal that is shared across multiple matrices or specific to a given matrix. We propose an empirical variational Bayesian approach to this problem that has several advantages over existing techniques, including the flexibility to accommodate shared signal over any number of row or column sets (i.e., bidimensional integration), an intuitive model-based objective function that yields appropriate shrinkage for the inferred signals, and a relatively efficient estimation algorithm with no tuning parameters. A general result establishes conditions for the uniqueness of the underlying decomposition for a broad family of methods that includes the proposed approach. For scenarios with missing data, we describe an associated iterative imputation approach that is novel for the single-matrix context and a powerful approach for "blockwise" imputation (in which an entire row or column is missing) in various linked matrix contexts. Extensive simulations show that the method performs very well under different scenarios with respect to recovering underlying low-rank signal, accurately decomposing shared and specific signals, and accurately imputing missing data. The approach is applied to gene expression and miRNA data from breast cancer tissue and normal breast tissue, for which it gives an informative decomposition of variation and outperforms alternative strategies for missing data imputation.


Gaussian Processes Sampling with Sparse Grids under Additive Schwarz Preconditioner

arXiv.org Machine Learning

Gaussian processes (GPs) are widely used in non-parametric Bayesian modeling, and play an important role in various statistical and machine learning applications. In a variety tasks of uncertainty quantification, generating random sample paths of GPs is of interest. As GP sampling requires generating high-dimensional Gaussian random vectors, it is computationally challenging if a direct method, such as the Cholesky decomposition, is used. In this paper, we propose a scalable algorithm for sampling random realizations of the prior and posterior of GP models. The proposed algorithm leverages inducing points approximation with sparse grids, as well as additive Schwarz preconditioners, which reduce computational complexity, and ensure fast convergence. We demonstrate the efficacy and accuracy of the proposed method through a series of experiments and comparisons with other recent works.


Extended Fiducial Inference: Toward an Automated Process of Statistical Inference

arXiv.org Machine Learning

While fiducial inference was widely considered a big blunder by R.A. Fisher, the goal he initially set --`inferring the uncertainty of model parameters on the basis of observations' -- has been continually pursued by many statisticians. To this end, we develop a new statistical inference method called extended Fiducial inference (EFI). The new method achieves the goal of fiducial inference by leveraging advanced statistical computing techniques while remaining scalable for big data. EFI involves jointly imputing random errors realized in observations using stochastic gradient Markov chain Monte Carlo and estimating the inverse function using a sparse deep neural network (DNN). The consistency of the sparse DNN estimator ensures that the uncertainty embedded in observations is properly propagated to model parameters through the estimated inverse function, thereby validating downstream statistical inference. Compared to frequentist and Bayesian methods, EFI offers significant advantages in parameter estimation and hypothesis testing. Specifically, EFI provides higher fidelity in parameter estimation, especially when outliers are present in the observations; and eliminates the need for theoretical reference distributions in hypothesis testing, thereby automating the statistical inference process. EFI also provides an innovative framework for semi-supervised learning.


Persistent Sampling: Unleashing the Potential of Sequential Monte Carlo

arXiv.org Machine Learning

Sequential Monte Carlo (SMC) methods are powerful tools for Bayesian inference but suffer from requiring many particles for accurate estimates, leading to high computational costs. We introduce persistent sampling (PS), an extension of SMC that mitigates this issue by allowing particles from previous iterations to persist. This generates a growing, weighted ensemble of particles distributed across iterations. In each iteration, PS utilizes multiple importance sampling and resampling from the mixture of all previous distributions to produce the next generation of particles. This addresses particle impoverishment and mode collapse, resulting in more accurate posterior approximations. Furthermore, this approach provides lower-variance marginal likelihood estimates for model comparison. Additionally, the persistent particles improve transition kernel adaptation for efficient exploration. Experiments on complex distributions show that PS consistently outperforms standard methods, achieving lower squared bias in posterior moment estimation and significantly reduced marginal likelihood errors, all at a lower computational cost. PS offers a robust, efficient, and scalable framework for Bayesian inference.


DKL-KAN: Scalable Deep Kernel Learning using Kolmogorov-Arnold Networks

arXiv.org Machine Learning

The need for scalable and expressive models in machine learning is paramount, particularly in applications requiring both structural depth and flexibility. Traditional deep learning methods, such as multilayer perceptrons (MLP), offer depth but lack ability to integrate structural characteristics of deep learning architectures with non-parametric flexibility of kernel methods. To address this, deep kernel learning (DKL) was introduced, where inputs to a base kernel are transformed using a deep learning architecture. These kernels can replace standard kernels, allowing both expressive power and scalability. The advent of Kolmogorov-Arnold Networks (KAN) has generated considerable attention and discussion among researchers in scientific domain. In this paper, we introduce a scalable deep kernel using KAN (DKL-KAN) as an effective alternative to DKL using MLP (DKL-MLP). Our approach involves simultaneously optimizing these kernel attributes using marginal likelihood within a Gaussian process framework. We analyze two variants of DKL-KAN for a fair comparison with DKL-MLP: one with same number of neurons and layers as DKL-MLP, and another with approximately same number of trainable parameters. To handle large datasets, we use kernel interpolation for scalable structured Gaussian processes (KISS-GP) for low-dimensional inputs and KISS-GP with product kernels for high-dimensional inputs. The efficacy of DKL-KAN is evaluated in terms of computational training time and test prediction accuracy across a wide range of applications. Additionally, the effectiveness of DKL-KAN is also examined in modeling discontinuities and accurately estimating prediction uncertainty. The results indicate that DKL-KAN outperforms DKL-MLP on datasets with a low number of observations. Conversely, DKL-MLP exhibits better scalability and higher test prediction accuracy on datasets with large number of observations.


Industrial-Grade Smart Troubleshooting through Causal Technical Language Processing: a Proof of Concept

arXiv.org Artificial Intelligence

This paper describes the development of a causal diagnosis approach for troubleshooting an industrial environment on the basis of the technical language expressed in Return on Experience records. The proposed method leverages the vectorized linguistic knowledge contained in the distributed representation of a Large Language Model, and the causal associations entailed by the embedded failure modes and mechanisms of the industrial assets. The paper presents the elementary but essential concepts of the solution, which is conceived as a causality-aware retrieval augmented generation system, and illustrates them experimentally on a real-world Predictive Maintenance setting. Finally, it discusses avenues of improvement for the maturity of the utilized causal technology to meet the robustness challenges of increasingly complex scenarios in the industry.


Confidence Estimation for Automatic Detection of Depression and Alzheimer's Disease Based on Clinical Interviews

arXiv.org Artificial Intelligence

It can also facilitate the identification of and depression has attracted increased attention. Confidence estimation ambiguous and borderline cases, necessitating the input of clinical is crucial for a trust-worthy automatic diagnostic system expertise. While confidence estimation techniques have which informs the clinician about the confidence of model been applied in areas like speech recognition [23-26] and dialogue predictions and helps reduce the risk of misdiagnosis. This paper systems [27], their application in detecting mental illnesses investigates confidence estimation for automatic detection through speech analysis remains largely unexplored. of AD and depression based on clinical interviews. A novel Bayesian approach is proposed which uses a dynamic Dirichlet This paper investigates confidence estimation for automatic prior distribution to model the second-order probability of AD and depression detection based on speech recordings from the predictive distribution.