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 Bayesian Learning


Neural Posterior Estimation on Exponential Random Graph Models: Evaluating Bias and Implementation Challenges

arXiv.org Machine Learning

Exponential random graph models (ERGMs) are flexible probabilistic frameworks to model statistical networks through a variety of network summary statistics. Conventional Bayesian estimation for ERGMs involves iteratively exchanging with an auxiliary variable due to the intractability of ERGMs, however, this approach lacks scalability to large-scale implementations. Neural posterior estimation (NPE) is a recent advancement in simulation-based inference, using a neural network based density estimator to infer the posterior for models with doubly intractable likelihoods for which simulations can be generated. While NPE has been successfully adopted in various fields such as cosmology, little research has investigated its use for ERGMs. Performing NPE on ERGM not only provides a differing angle of resolving estimation for the intractable ERGM likelihoods but also allows more efficient and scalable inference using the amortisation properties of NPE, and therefore, we investigate how NPE can be effectively implemented in ERGMs. In this study, we present the first systematic implementation of NPE for ERGMs, rigorously evaluating potential biases, interpreting the biases magnitudes, and comparing NPE fittings against conventional Bayesian ERGM fittings. More importantly, our work highlights ERGM-specific areas that may impose particular challenges for the adoption of NPE.


Leveraging deep learning for plant disease identification: a bibliometric analysis in SCOPUS from 2018 to 2024

arXiv.org Artificial Intelligence

Deep learning has emerged as a transformative technology in agricultural science, particularly for the identification of plant diseases. This approach leverages advanced algorithms, primarily Convolutional Neural Networks (CNNs), to analyze images of plants and accurately diagnose diseases that threaten crop health and yield (Mohanty et al., 2016; Guo et al., 2020; Saleem et al., 2020; Ahmed & Y adav, 2023; Jung et al., 2023; Shoaib et al., 2023; Pacal et al., 2024). Plant diseases pose a significant threat to global food security, leading to substantial yield losses and economic impacts on agriculture. T raditional methods of disease identification often rely on visual assessments by trained professionals, which can be time-consuming, subjective, and prone to errors (Jafar et al., 2024). As a result, there is a pressing need for automated systems that can provide rapid and accurate disease detection to support farmers and agricultural experts in managing crop health effectively . Deep learning models, especially CNNs, have been shown to outperform traditional methods in terms of accuracy and efficiency . These models can learn hierarchical representations from raw image data, enabling them to identify complex patterns associated with various plant diseases. Recent studies have demonstrated that CNNs can achieve accuracy rates as high as 99.35% when classifying images of diseased and healthy plants. The architecture of CNNs typically includes layers for feature extraction and classification, allowing them to process visual information effectively .


Guarding Digital Privacy: Exploring User Profiling and Security Enhancements

arXiv.org Artificial Intelligence

User profiling, the practice of collecting user information for personalized recommendations, has become widespread, driving progress in technology. However, this growth poses a threat to user privacy, as devices often collect sensitive data without their owners' awareness. This article aims to consolidate knowledge on user profiling, exploring various approaches and associated challenges. Through the lens of two companies sharing user data and an analysis of 18 popular Android applications in India across various categories, including $\textit{Social, Education, Entertainment, Travel, Shopping and Others}$, the article unveils privacy vulnerabilities. Further, the article propose an enhanced machine learning framework, employing decision trees and neural networks, that improves state-of-the-art classifiers in detecting personal information exposure. Leveraging the XAI (explainable artificial intelligence) algorithm LIME (Local Interpretable Model-agnostic Explanations), it enhances interpretability, crucial for reliably identifying sensitive data. Results demonstrate a noteworthy performance boost, achieving a $75.01\%$ accuracy with a reduced training time of $3.62$ seconds for neural networks. Concluding, the paper suggests research directions to strengthen digital security measures.


Robustness quantification: a new method for assessing the reliability of the predictions of a classifier

arXiv.org Artificial Intelligence

Based on existing ideas in the field of imprecise probabilities, we present a new approach for assessing the reliability of the individual predictions of a generative probabilistic classifier. We call this approach robustness quantification, compare it to uncertainty quantification, and demonstrate that it continues to work well even for classifiers that are learned from small training sets that are sampled from a shifted distribution.


Unifying and extending Diffusion Models through PDEs for solving Inverse Problems

arXiv.org Machine Learning

Diffusion models have emerged as powerful generative tools with applications in computer vision and scientific machine learning (SciML), where they have been used to solve large-scale probabilistic inverse problems. Traditionally, these models have been derived using principles of variational inference, denoising, statistical signal processing, and stochastic differential equations. In contrast to the conventional presentation, in this study we derive diffusion models using ideas from linear partial differential equations and demonstrate that this approach has several benefits that include a constructive derivation of the forward and reverse processes, a unified derivation of multiple formulations and sampling strategies, and the discovery of a new class of models. We also apply the conditional version of these models to solving canonical conditional density estimation problems and challenging inverse problems. These problems help establish benchmarks for systematically quantifying the performance of different formulations and sampling strategies in this study, and for future studies. Finally, we identify and implement a mechanism through which a single diffusion model can be applied to measurements obtained from multiple measurement operators. Taken together, the contents of this manuscript provide a new understanding and several new directions in the application of diffusion models to solving physics-based inverse problems.


Identifying Key Challenges of Hardness-Based Resampling

arXiv.org Artificial Intelligence

--Performance gap across classes remains a persistent challenge in machine learning, often attributed to variations in class hardness. One way to quantify class hardness is through sample complexity - the minimum number of samples required to effectively learn a given class. Sample complexity theory suggests that class hardness is driven by differences in the amount of data required for generalization. That is, harder classes need substantially more samples to achieve generalization. Therefore, hardness-based resampling is a promising approach to mitigate these performance disparities. While resampling has been studied extensively in data-imbalanced settings, its impact on balanced datasets remains unexplored. This raises the fundamental question whether resampling is effective because it addresses data imbalance or hardness imbalance. We begin addressing this question by introducing class imbalance into balanced datasets and evaluate its effect on performance disparities. We oversample hard classes and undersample easy classes to bring hard classes closer to their sample complexity requirements while maintaining a constant dataset size for fairness. We estimate class-level hardness using the Area Under the Margin (AUM) hardness estimator and leverage it to compute resampling ratios. Using these ratios, we perform hardness-based resampling on the well-known CIF AR-10 and CIF AR-100 datasets. Contrary to theoretical expectations, our results show that hardness-based resampling does not meaningfully affect class-wise performance disparities. T o explain this discrepancy, we conduct detailed analyses to identify key challenges unique to hardness-based imbalance, distinguishing it from traditional data-based imbalance. Our insights help explain why theoretical sample complexity expectations fail to translate into practical performance gains and we provide guidelines for future research. CCESS to large datasets has fueled recent machine learning breakthroughs [1], yet data efficiency remains a critical challenge [2]. Addressing this challenge requires a deep understanding of instance, class, and dataset level hardness. Empirical works reveal large performance gaps across classes [3]-[5] and clear distinctions between easy (e.g. ImageNet) [6], [7] as shown in see Figure 1. Pawel Pukowski is with the University of Sheffield. V enet Osmani is with the Digital Environment Research Institute, Queen Mary University of London. This work has been submitted to the IEEE for possible publication. Figure 1: Training an ensemble of ten ResNet18 networks on CIFAR-10 (left) and CIFAR-100 (right) reveals large recall gaps across classes, despite the balanced nature of these datasets. Paired with significantly larger recall gaps across classes for CIFAR-100 than CIFAR-10, this shows class-and dataset-level hardness discrepancies, which we call hardness-based imbalance.


Predicting Survivability of Cancer Patients with Metastatic Patterns Using Explainable AI

arXiv.org Artificial Intelligence

Cancer remains a leading global health challenge and a major cause of mortality. This study leverages machine learning (ML) to predict the survivability of cancer patients with metastatic patterns using the comprehensive MSK-MET dataset, which includes genomic and clinical data from 25,775 patients across 27 cancer types. We evaluated five ML models-XGBoost, Naรฏve Bayes, Decision Tree, Logistic Regression, and Random Fores using hyperparameter tuning and grid search. XGBoost emerged as the best performer with an area under the curve (AUC) of 0.82. To enhance model interpretability, SHapley Additive exPlanations (SHAP) were applied, revealing key predictors such as metastatic site count, tumor mutation burden, fraction of genome altered, and organ-specific metastases. Further survival analysis using Kaplan-Meier curves, Cox Proportional Hazards models, and XGBoost Survival Analysis identified significant predictors of patient outcomes, offering actionable insights for clinicians. These findings could aid in personalized prognosis and treatment planning, ultimately improving patient care.


An experimental survey and Perspective View on Meta-Learning for Automated Algorithms Selection and Parametrization

arXiv.org Artificial Intelligence

Considerable progress has been made in the recent literature studies to tackle the Algorithms Selection and Parametrization (ASP) problem, which is diversified in multiple meta-learning setups. Yet there is a lack of surveys and comparative evaluations that critically analyze, summarize and assess the performance of existing methods. In this paper, we provide an overview of the state of the art in this continuously evolving field. The survey sheds light on the motivational reasons for pursuing classifiers selection through meta-learning. In this regard, Automated Machine Learning (AutoML) is usually treated as an ASP problem under the umbrella of the democratization of machine learning. Accordingly, AutoML makes machine learning techniques accessible to domain scientists who are interested in applying advanced analytics but lack the required expertise. It can ease the task of manually selecting ML algorithms and tuning related hyperparameters. We comprehensively discuss the different phases of classifiers selection based on a generic framework that is formed as an outcome of reviewing prior works. Subsequently, we propose a benchmark knowledge base of 4 millions previously learned models and present extensive comparative evaluations of the prominent methods for classifiers selection based on 08 classification algorithms and 400 benchmark datasets. The comparative study quantitatively assesses the performance of algorithms selection methods along while emphasizing the strengths and limitations of existing studies.


Measuring Dรฉjร  vu Memorization Efficiently

arXiv.org Artificial Intelligence

Recent research has shown that representation learning models may accidentally memorize their training data. For example, the dรฉjร  vu method shows that for certain representation learning models and training images, it is sometimes possible to correctly predict the foreground label given only the representation of the background - better than through dataset-level correlations. However, their measurement method requires training two models - one to estimate dataset-level correlations and the other to estimate memorization. This multiple model setup becomes infeasible for large open-source models. In this work, we propose alternative simple methods to estimate dataset-level correlations, and show that these can be used to approximate an off-the-shelf model's memorization ability without any retraining. This enables, for the first time, the measurement of memorization in pre-trained open-source image representation and vision-language representation models. Our results show that different ways of measuring memorization yield very similar aggregate results. We also find that open-source models typically have lower aggregate memorization than similar models trained on a subset of the data. The code is available both for vision and vision language models.


Cramer-Rao Bounds for Laplacian Matrix Estimation

arXiv.org Machine Learning

Abstract--In this paper, we analyze the performance of the estimation of Laplacian matrices under general observatio n models. Laplacian matrix estimation involves structural c on-straints, including symmetry and null-space properties, a long with matrix sparsity. By exploiting a linear reparametriza tion that enforces the structural constraints, we derive closed -form matrix expressions for the Cram er-Rao Bound (CRB) specifically tailored to Laplacian matrix estimation. We further extend the derivation to the sparsity-constrained case, introduc ing two oracle CRBs that incorporate prior information of the suppo rt set, i.e. the locations of the nonzero entries in the Laplaci an matrix. We examine the properties and order relations betwe en the bounds, and provide the associated Slepian-Bangs formu la for the Gaussian case. We demonstrate the use of the new CRBs in three representative applications: (i) topology identi fication in power systems, (ii) graph filter identification in diffuse d models, and (iii) precision matrix estimation in Gaussian M arkov random fields under Laplacian constraints. The CRBs are eval - uated and compared with the mean-squared-errors (MSEs) of the constrained maximum likelihood estimator (CMLE), whic h integrates both equality and inequality constraints along with sparsity constraints, and of the oracle CMLE, which knows the locations of the nonzero entries of the Laplacian matrix . We perform this analysis for the applications of power syste m topology identification and graphical LASSO, and demonstra te that the MSEs of the estimators converge to the CRB and oracle CRB, given a sufficient number of measurements. Graph-structured data and signals arise in numerous applications, including power systems, communications, finance, social networks, and biological networks, for analysis and inference of networks [ 2 ], [ 3 ]. In this context, the Laplacian matrix, which captures node connectivity and edge weights, serves as a fundamental tool for clustering [ 4 ], modeling graph diffusion processes [ 5 ], [ 6 ], topology inference [ 6 ]-[ 12 ], anomaly detection [ 13 ], graph-based filtering [ 14 ]-[ 18 ], and analyzing smoothness on graphs [ 19 ]. M. Halihal and T. Routtenberg are with the School of Electric al and Computer Engineering, Ben-Gurion University of the Negev, Beer-Sheva 84105, Israel, e-mail: moradha@post.bgu.ac.il, tirzar@b gu.ac.il.