Bayesian Learning
Learning with Multiple Labels
In this paper, we study a special kind of learning problem in which each training instance is given a set of (or distribution over) candidate class labels and only one of the candidate labels is the correct one. Such a problem can occur, e.g., in an information retrieval setting where a set of words is associated with an image, or if classes labels are organized hierarchically. We propose a novel discriminative approach for handling the ambiguity of class labels in the training examples. The experiments with the proposed approach over five different UCI datasets show that our approach is able to find the correct label among the set of candidate labels and actually achieve performance close to the case when each training instance is given a single correct label. In contrast, naIve methods degrade rapidly as more ambiguity is introduced into the labels. 1 Introduction Supervised and unsupervised learning problems have been extensively studied in the machine learning literature. In supervised classification each training instance is associated with a single class label, while in unsupervised classification (i.e.
Handling Missing Data with Variational Bayesian Learning of ICA
Chan, Kwokleung, Lee, Te-Won, Sejnowski, Terrence J.
Missing data is common in real-world datasets and is a problem for many estimation techniques. We have developed a variational Bayesian method to perform Independent Component Analysis (ICA) on high-dimensional data containing missing entries. Missing data are handled naturally in the Bayesian framework by integrating the generative density model. Modeling the distributions of the independent sources with mixture of Gaussians allows sources to be estimated with different kurtosis and skewness. The variational Bayesian method automatically determines the dimensionality of the data and yields an accurate density model for the observed data without overfitting problems. This allows direct probability estimation of missing values in the high dimensional space and avoids dimension reduction preprocessing which is not feasible with missing data.
Using Tarjan's Red Rule for Fast Dependency Tree Construction
We focus on the problem of efficient learning of dependency trees. It is well-known that given the pairwise mutual information coefficients, a minimum-weight spanning tree algorithm solves this problem exactly and in polynomial time. However, for large data-sets it is the construction of the correlation matrix that dominates the running time. We have developed a new spanning-tree algorithm which is capable of exploiting partial knowledge about edge weights. The partial knowledge we maintain is a probabilistic confidence interval on the coefficients, which we derive by examining just a small sample of the data. The algorithm is able to flag the need to shrink an interval, which translates to inspection of more data for the particular attribute pair. Experimental results show running time that is near-constant in the number of records, without significant loss in accuracy of the generated trees. Interestingly, our spanning-tree algorithm is based solely on Tarjan's red-edge rule, which is generally considered a guaranteed recipe for bad performance.
VIBES: A Variational Inference Engine for Bayesian Networks
Bishop, Christopher M., Spiegelhalter, David, Winn, John
In recent years variational methods have become a popular tool for approximate inference and learning in a wide variety of probabilistic models. For each new application, however, it is currently necessary first to derive the variational update equations, and then to implement them in application-specific code. Each of these steps is both time consuming and error prone. In this paper we describe a general purpose inference engine called VIBES ('Variational Inference for Bayesian Networks') which allows a wide variety of probabilistic models to be implemented and solved variationally without recourse to coding. New models are specified either through a simple script or via a graphical interface analogous to a drawing package. VIBES then automatically generates and solves the variational equations. We illustrate the power and flexibility of VIBES using examples from Bayesian mixture modelling.
A Differential Semantics for Jointree Algorithms
Park, James D., Darwiche, Adnan
A new approach to inference in belief networks has been recently proposed, which is based on an algebraic representation of belief networks using multi-linear functions. According to this approach, the key computational question is that of representing multi-linear functions compactly, since inference reduces to a simple process of ev aluating and differentiating such functions. W e show here that mainstream inference algorithms based on jointrees are a special case of this approach in a v ery precise sense. W e use this result to prov e new properties of jointree algorithms, and then discuss some of its practical and theoretical implications.
Regularized Greedy Importance Sampling
Southey, Finnegan, Schuurmans, Dale, Ghodsi, Ali
Greedy importance sampling is an unbiased estimation technique that reduces the variance of standard importance sampling by explicitly searching for modes in the estimation objective. Previous work has demonstrated the feasibility of implementing this method and proved that the technique is unbiased in both discrete and continuous domains. In this paper we present a reformulation of greedy importance sampling that eliminates the free parameters from the original estimator, and introduces a new regularization strategy that further reduces variance without compromising unbiasedness. The resulting estimator is shown to be effective for difficult estimation problems arising in Markov random field inference. In particular, improvements are achieved over standard MCMC estimators when the distribution has multiple peaked modes.
Adaptive Classification by Variational Kalman Filtering
Sykacek, Peter, Roberts, Stephen J.
We propose in this paper a probabilistic approach for adaptive inference of generalized nonlinear classification that combines the computational advantage of a parametric solution with the flexibility of sequential sampling techniques. We regard the parameters of the classifier as latent states in a first order Markov process and propose an algorithm which can be regarded as variational generalization of standard Kalman filtering. The variational Kalman filter is based on two novel lower bounds that enable us to use a non-degenerate distribution over the adaptation rate. An extensive empirical evaluation demonstrates that the proposed method is capable of infering competitive classifiers both in stationary and non-stationary environments. Although we focus on classification, the algorithm is easily extended to other generalized nonlinear models.
Dynamic Bayesian Networks with Deterministic Latent Tables
The application of latent/hidden variable Dynamic Bayesian Networks is constrained by the complexity of marginalising over latent variables. For this reason either small latent dimensions or Gaussian latent conditional tables linearly dependent on past states are typically considered in order that inference is tractable. We suggest an alternative approach in which the latent variables are modelled using deterministic conditional probability tables. This specialisation has the advantage of tractable inference even for highly complex nonlinear/non-Gaussian visible conditional probability tables. This approach enables the consideration of highly complex latent dynamics whilst retaining the benefits of a tractable probabilistic model.
On the Dirichlet Prior and Bayesian Regularization
Steck, Harald, Jaakkola, Tommi S.
In the Bayesian approach, regularization is achieved by specifying a prior distribution over the parameters and subsequently averaging over the posterior distribution. This regularization provides not only smoother estimates of the parameters compared to maximum likelihood but also guides the selection of model structures. It was pointed out in [6] that a very large scale parameter of the Dirichlet prior can degrade predictive accuracy due to severe regularization of the parameter estimates. We complement this discussion here and show that a very small scale parameter can lead to poor over-regularized structures when a product of (conjugate) Dirichlet priors is used over multinomial conditional distributions (Section 3). Section 4 demonstrates the effect of the scale parameter and how it can be calibrated. We focus on the class of Bayesian network models throughout this paper.
Independent Components Analysis through Product Density Estimation
Hastie, Trevor, Tibshirani, Rob
We present a simple direct approach for solving the ICA problem, using density estimation and maximum likelihood. Given a candidate orthogonal frame, we model each of the coordinates using a semi-parametric density estimate based on cubic splines. Since our estimates have two continuous derivatives, we can easily run a second order search for the frame parameters. Our method performs very favorably when compared to state-of-the-art techniques. 1 Introduction Independent component analysis (ICA) is a popular enhancement over principal component analysis (PCA) and factor analysis. IRP which is assumed to arise from a linear mixing of a latent random source vector S E IRP, (1) X AS; the components Sj, j 1,...,p of S are assumed to be independently distributed.