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 Bayesian Learning


Feature Selection with Conjunctions of Decision Stumps and Learning from Microarray Data

arXiv.org Artificial Intelligence

One of the objectives of designing feature selection learning algorithms is to obtain classifiers that depend on a small number of attributes and have verifiable future performance guarantees. There are few, if any, approaches that successfully address the two goals simultaneously. Performance guarantees become crucial for tasks such as microarray data analysis due to very small sample sizes resulting in limited empirical evaluation. To the best of our knowledge, such algorithms that give theoretical bounds on the future performance have not been proposed so far in the context of the classification of gene expression data. In this work, we investigate the premise of learning a conjunction (or disjunction) of decision stumps in Occam's Razor, Sample Compression, and PAC-Bayes learning settings for identifying a small subset of attributes that can be used to perform reliable classification tasks. We apply the proposed approaches for gene identification from DNA microarray data and compare our results to those of well known successful approaches proposed for the task. We show that our algorithm not only finds hypotheses with much smaller number of genes while giving competitive classification accuracy but also have tight risk guarantees on future performance unlike other approaches. The proposed approaches are general and extensible in terms of both designing novel algorithms and application to other domains.


Planning for Concurrent Action Executions Under Action Duration Uncertainty Using Dynamically Generated Bayesian Networks

AAAI Conferences

An interesting class of planning domains, including planning for daily activities of Mars rovers, involves achievement of goals with time constraints and concurrent actions with probabilistic durations. Current probabilistic approaches, which rely on a discrete time model, introduce a blow up in the search state-space when the two factors of action concurrency and action duration uncertainty are combined. Simulation-based and sampling probabilistic planning approaches would cope with this state explosion by avoiding storing all the explored states in memory, but they remain approximate solution approaches. In this paper, we present an alternative approach relying on a continuous time model which avoids the state explosion caused by time stamping in the presence of action concurrency and action duration uncertainty. Time is represented as a continuous random variable. The dependency between state time variables is conveyed by a Bayesian network, which is dynamically generated by a state-based forward-chaining search based on the action descriptions. A generated plan is characterized by a probability of satisfying a goal. The evaluation of this probability is done by making a query the Bayesian network.


Quantum learning: optimal classification of qubit states

arXiv.org Machine Learning

Pattern recognition is a central topic in Learning Theory with numerous applications such as voice and text recognition, image analysis, computer diagnosis. The statistical set-up in classification is the following: we are given an i.i.d. training set $(X_{1},Y_{1}),... (X_{n},Y_{n})$ where $X_{i}$ represents a feature and $Y_{i}\in \{0,1\}$ is a label attached to that feature. The underlying joint distribution of $(X,Y)$ is unknown, but we can learn about it from the training set and we aim at devising low error classifiers $f:X\to Y$ used to predict the label of new incoming features. Here we solve a quantum analogue of this problem, namely the classification of two arbitrary unknown qubit states. Given a number of `training' copies from each of the states, we would like to `learn' about them by performing a measurement on the training set. The outcome is then used to design mesurements for the classification of future systems with unknown labels. We find the asymptotically optimal classification strategy and show that typically, it performs strictly better than a plug-in strategy based on state estimation. The figure of merit is the excess risk which is the difference between the probability of error and the probability of error of the optimal measurement when the states are known, that is the Helstrom measurement. We show that the excess risk has rate $n^{-1}$ and compute the exact constant of the rate.


Spatio-Temporal Graphical Model Selection

arXiv.org Machine Learning

This paper treats the problem of learning the interaction structure of a spatiotemporal graphical model for a discrete state and discrete time stochastic process known as the susceptible, infected, recovered (SIR) model. The presence of spatial interactions cause adjacent nodes in the graph to affect each others states over time. Learning the topology of this graph is known as model selection. We cast this graphical model selection problem as a penalized likelihood problem, resulting in a convex program for which convex optimization solvers can be applied. SIR spatiotemporal graphical models are commonly used in modeling the random propagation of information between nodes in large networks in bioinformatics, signal processing, public health, and national security (4; 9; 21). Knowing the network link structure allows accurate prediction of individual node states and can aid the development of control and intervention strategies for such networks. This paper develops a tractable method to estimate the topology of the network for the SIR spatiotemporal graphical model from empirical data. Exact solutions of the graphical model selection problem is NP hard due to the combinatorial nature of enumeration through the discrete space of possible graph topologies.


A Minimum Relative Entropy Principle for Learning and Acting

arXiv.org Artificial Intelligence

This paper proposes a method to construct an adaptive agent that is universal with respect to a given class of experts, where each expert is an agent that has been designed specifically for a particular environment. This adaptive control problem is formalized as the problem of minimizing the relative entropy of the adaptive agent from the expert that is most suitable for the unknown environment. If the agent is a passive observer, then the optimal solution is the well-known Bayesian predictor. However, if the agent is active, then its past actions need to be treated as causal interventions on the I/O stream rather than normal probability conditions. Here it is shown that the solution to this new variational problem is given by a stochastic controller called the Bayesian control rule, which implements adaptive behavior as a mixture of experts. Furthermore, it is shown that under mild assumptions, the Bayesian control rule converges to the control law of the most suitable expert.


A stochastic model of human visual attention with a dynamic Bayesian network

arXiv.org Machine Learning

Recent studies in the field of human vision science suggest that the human responses to the stimuli on a visual display are non-deterministic. People may attend to different locations on the same visual input at the same time. Based on this knowledge, we propose a new stochastic model of visual attention by introducing a dynamic Bayesian network to predict the likelihood of where humans typically focus on a video scene. The proposed model is composed of a dynamic Bayesian network with 4 layers. Our model provides a framework that simulates and combines the visual saliency response and the cognitive state of a person to estimate the most probable attended regions. Sample-based inference with Markov chain Monte-Carlo based particle filter and stream processing with multi-core processors enable us to estimate human visual attention in near real time. Experimental results have demonstrated that our model performs significantly better in predicting human visual attention compared to the previous deterministic models.


Large Margin Boltzmann Machines and Large Margin Sigmoid Belief Networks

arXiv.org Artificial Intelligence

Current statistical models for structured prediction make simplifying assumptions about the underlying output graph structure, such as assuming a low-order Markov chain, because exact inference becomes intractable as the tree-width of the underlying graph increases. Approximate inference algorithms, on the other hand, force one to trade off representational power with computational efficiency. In this paper, we propose two new types of probabilistic graphical models, large margin Boltzmann machines (LMBMs) and large margin sigmoid belief networks (LMSBNs), for structured prediction. LMSBNs in particular allow a very fast inference algorithm for arbitrary graph structures that runs in polynomial time with a high probability. This probability is data-distribution dependent and is maximized in learning. The new approach overcomes the representation-efficiency trade-off in previous models and allows fast structured prediction with complicated graph structures. We present results from applying a fully connected model to multi-label scene classification and demonstrate that the proposed approach can yield significant performance gains over current state-of-the-art methods.


Document Classification for Focused Topics

AAAI Conferences

Feature extraction is one of the fundamental challenges in improving the accuracy of document classification. While there has been a large body of research literature on document classification, most existing approaches either do not have a high classification accuracy or require massive training sets. In this paper, we propose a simple feature extraction algorithm that can achieve high document classification accuracy in the context of development-centric topics. Our feature extraction algorithm exploits two distinct aspects in development-centric topics: most of these topics tend to be very focused (unlike semantically hard classification topics such as chemistry or banks) due to local language and cultural underpinnings in these topics, the authentic pages tend to use several region specific features. Our algorithm uses a combination of popularity and rarity as two separate metrics to extract features that describe a topic. Given a topic, our output feature set comprises of: (i) a list of popular keywords closely related to the topic; (ii) a list of rare keywords closely related to the topic. We show that a simple joint classifier based on these two feature sets can achieve high classification accuracy while each feature sub-set in itself is insufficient. We have tested our algorithm across a wide range of development-centric topics.


Causal Structure Learning for Famine Prediction

AAAI Conferences

Food shortages are increasing in many areas of the world. In this paper, we consider the problem of understanding the causal relationships between socioeconomic factors in a developing-world household and their risk of experiencing famine. We analyse the extent to which it is possible to predict famine in a household based on these factors, looking at a data collected from 5404 households in Uganda. To do this we use a set of causal structure learning algorithms, employed as a committee that votes on the causal relationships between the variables. We contrast prediction accuracy of famine based on feature sets suggested by our prior knowledge and by the models we learn.


An Agile and Accessible Adaptation of Bayesian Inference to Medical Diagnostics for Rural Health Extension Workers

AAAI Conferences

We have adapted an expert system of medical diagnosis for use by low to mid-level health workers in remote and rural locations. Key to the successful deployment of this expert system is the rapid adaptation of the database and clinical interface for use in specific regions and by varying user skill.