Bayesian Learning
Subjectivity, Bayesianism, and Causality
Bayesian probability theory is one of the most successful frameworks to model reasoning under uncertainty. Its defining property is the interpretation of probabilities as degrees of belief in propositions about the state of the world relative to an inquiring subject. This essay examines the notion of subjectivity by drawing parallels between Lacanian theory and Bayesian probability theory, and concludes that the latter must be enriched with causal interventions to model agency. The central contribution of this work is an abstract model of the subject that accommodates causal interventions in a measure-theoretic formalisation. This formalisation is obtained through a game-theoretic Ansatz based on modelling the inside and outside of the subject as an extensive-form game with imperfect information between two players. Finally, I illustrate the expressiveness of this model with an example of causal induction.
A local approach to estimation in discrete loglinear models
We consider two connected aspects of maximum likelihood estimation of the parameter for high-dimensional discrete graphical models: the existence of the maximum likelihood estimate (mle) and its computation. When the data is sparse, there are many zeros in the contingency table and the maximum likelihood estimate of the parameter may not exist. Fienberg and Rinaldo (2012) have shown that the mle does not exists iff the data vector belongs to a face of the so-called marginal cone spanned by the rows of the design matrix of the model. Identifying these faces in high-dimension is challenging. In this paper, we take a local approach : we show that one such face, albeit possibly not the smallest one, can be identified by looking at a collection of marginal graphical models generated by induced subgraphs $G_i,i=1,\ldots,k$ of $G$. This is our first contribution. Our second contribution concerns the composite maximum likelihood estimate. When the dimension of the problem is large, estimating the parameters of a given graphical model through maximum likelihood is challenging, if not impossible. The traditional approach to this problem has been local with the use of composite likelihood based on local conditional likelihoods. A more recent development is to have the components of the composite likelihood be marginal likelihoods centred around each $v$. We first show that the estimates obtained by consensus through local conditional and marginal likelihoods are identical. We then study the asymptotic properties of the composite maximum likelihood estimate when both the dimension of the model and the sample size $N$ go to infinity.
Asymptotic Accuracy of Bayesian Estimation for a Single Latent Variable
In data science and machine learning, hierarchical parametric models, such as mixture models, are often used. They contain two kinds of variables: observable variables, which represent the parts of the data that can be directly measured, and latent variables, which represent the underlying processes that generate the data. Although there has been an increase in research on the estimation accuracy for observable variables, the theoretical analysis of estimating latent variables has not been thoroughly investigated. In a previous study, we determined the accuracy of a Bayes estimation for the joint probability of the latent variables in a dataset, and we proved that the Bayes method is asymptotically more accurate than the maximum-likelihood method. However, the accuracy of the Bayes estimation for a single latent variable remains unknown. In the present paper, we derive the asymptotic expansions of the error functions, which are defined by the Kullback-Leibler divergence, for two types of single-variable estimations when the statistical regularity is satisfied. Our results indicate that the accuracies of the Bayes and maximum-likelihood methods are asymptotically equivalent and clarify that the Bayes method is only advantageous for multivariable estimations.
Probabilistic Clustering of Time-Evolving Distance Data
Vogt, Julia E., Kloft, Marius, Stark, Stefan, Raman, Sudhir S., Prabhakaran, Sandhya, Roth, Volker, Rรคtsch, Gunnar
We present a novel probabilistic clustering model for objects that are represented via pairwise distances and observed at different time points. The proposed method utilizes the information given by adjacent time points to find the underlying cluster structure and obtain a smooth cluster evolution. This approach allows the number of objects and clusters to differ at every time point, and no identification on the identities of the objects is needed. Further, the model does not require the number of clusters being specified in advance -- they are instead determined automatically using a Dirichlet process prior. We validate our model on synthetic data showing that the proposed method is more accurate than state-of-the-art clustering methods. Finally, we use our dynamic clustering model to analyze and illustrate the evolution of brain cancer patients over time.
Topic Modeling of Hierarchical Corpora
Kim, Do-kyum, Voelker, Geoffrey M., Saul, Lawrence K.
We study the problem of topic modeling in corpora whose documents are organized in a multi-level hierarchy. We explore a parametric approach to this problem, assuming that the number of topics is known or can be estimated by cross-validation. The models we consider can be viewed as special (finite-dimensional) instances of hierarchical Dirichlet processes (HDPs). For these models we show that there exists a simple variational approximation for probabilistic inference. The approximation relies on a previously unexploited inequality that handles the conditional dependence between Dirichlet latent variables in adjacent levels of the model's hierarchy. We compare our approach to existing implementations of nonparametric HDPs. On several benchmarks we find that our approach is faster than Gibbs sampling and able to learn more predictive models than existing variational methods. Finally, we demonstrate the large-scale viability of our approach on two newly available corpora from researchers in computer security---one with 350,000 documents and over 6,000 internal subcategories, the other with a five-level deep hierarchy.
Geometric Representations of Random Hypergraphs
Lunagรณmez, Simรณn, Mukherjee, Sayan, Wolpert, Robert L., Airoldi, Edoardo M.
A parametrization of hypergraphs based on the geometry of points in $\mathbf{R}^d$ is developed. Informative prior distributions on hypergraphs are induced through this parametrization by priors on point configurations via spatial processes. This prior specification is used to infer conditional independence models or Markov structure of multivariate distributions. Specifically, we can recover both the junction tree factorization as well as the hyper Markov law. This approach offers greater control on the distribution of graph features than Erd\"os-R\'enyi random graphs, supports inference of factorizations that cannot be retrieved by a graph alone, and leads to new Metropolis\slash Hastings Markov chain Monte Carlo algorithms with both local and global moves in graph space. We illustrate the utility of this parametrization and prior specification using simulations.
Privacy for Free: Posterior Sampling and Stochastic Gradient Monte Carlo
Wang, Yu-Xiang, Fienberg, Stephen E., Smola, Alex
We consider the problem of Bayesian learning on sensitive datasets and present two simple but somewhat surprising results that connect Bayesian learning to "differential privacy:, a cryptographic approach to protect individual-level privacy while permiting database-level utility. Specifically, we show that that under standard assumptions, getting one single sample from a posterior distribution is differentially private "for free". We will see that estimator is statistically consistent, near optimal and computationally tractable whenever the Bayesian model of interest is consistent, optimal and tractable. Similarly but separately, we show that a recent line of works that use stochastic gradient for Hybrid Monte Carlo (HMC) sampling also preserve differentially privacy with minor or no modifications of the algorithmic procedure at all, these observations lead to an "anytime" algorithm for Bayesian learning under privacy constraint. We demonstrate that it performs much better than the state-of-the-art differential private methods on synthetic and real datasets.
Early Stopping is Nonparametric Variational Inference
Maclaurin, Dougal, Duvenaud, David, Adams, Ryan P.
We show that unconverged stochastic gradient descent can be interpreted as a procedure that samples from a nonparametric variational approximate posterior distribution. This distribution is implicitly defined as the transformation of an initial distribution by a sequence of optimization updates. By tracking the change in entropy over this sequence of transformations during optimization, we form a scalable, unbiased estimate of the variational lower bound on the log marginal likelihood. We can use this bound to optimize hyperparameters instead of using cross-validation. This Bayesian interpretation of SGD suggests improved, overfitting-resistant optimization procedures, and gives a theoretical foundation for popular tricks such as early stopping and ensembling. We investigate the properties of this marginal likelihood estimator on neural network models.
On model misspecification and KL separation for Gaussian graphical models
We establish bounds on the KL divergence between two multivariate Gaussian distributions in terms of the Hamming distance between the edge sets of the corresponding graphical models. We show that the KL divergence is bounded below by a constant when the graphs differ by at least one edge; this is essentially the tightest possible bound, since classes of graphs exist for which the edge discrepancy increases but the KL divergence remains bounded above by a constant. As a natural corollary to our KL lower bound, we also establish a sample size requirement for correct model selection via maximum likelihood estimation. Our results rigorize the notion that it is essential to estimate the edge structure of a Gaussian graphical model accurately in order to approximate the true distribution to close precision.
A Probabilistic Theory of Deep Learning
Patel, Ankit B., Nguyen, Tan, Baraniuk, Richard G.
A grand challenge in machine learning is the development of computational algorithms that match or outperform humans in perceptual inference tasks that are complicated by nuisance variation. For instance, visual object recognition involves the unknown object position, orientation, and scale in object recognition while speech recognition involves the unknown voice pronunciation, pitch, and speed. Recently, a new breed of deep learning algorithms have emerged for high-nuisance inference tasks that routinely yield pattern recognition systems with near- or super-human capabilities. But a fundamental question remains: Why do they work? Intuitions abound, but a coherent framework for understanding, analyzing, and synthesizing deep learning architectures has remained elusive. We answer this question by developing a new probabilistic framework for deep learning based on the Deep Rendering Model: a generative probabilistic model that explicitly captures latent nuisance variation. By relaxing the generative model to a discriminative one, we can recover two of the current leading deep learning systems, deep convolutional neural networks and random decision forests, providing insights into their successes and shortcomings, as well as a principled route to their improvement.