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 Bayesian Learning


An Efficient ADMM Algorithm for Structural Break Detection in Multivariate Time Series

arXiv.org Machine Learning

We present an efficient alternating direction method of multipliers (ADMM) algorithm for segmenting a multivariate non-stationary time series with structural breaks into stationary regions. We draw from recent work where the series is assumed to follow a vector autoregressive model within segments and a convex estimation procedure may be formulated using group fused lasso penalties. Our ADMM approach first splits the convex problem into a global quadratic program and a simple group lasso proximal update. We show that the global problem may be parallelized over rows of the time dependent transition matrices and furthermore that each subproblem may be rewritten in a form identical to the log-likelihood of a Gaussian state space model. Consequently, we develop a Kalman smoothing algorithm to solve the global update in time linear in the length of the series.


Variational Bayesian Inference For A Scale Mixture Of Normal Distributions Handling Missing Data

arXiv.org Machine Learning

In this paper, a scale mixture of Normal distributions model is developed for classification and clustering of data having outliers and missing values. The classification method, based on a mixture model, focuses on the introduction of latent variables that gives us the possibility to handle sensitivity of model to outliers and to allow a less restrictive modelling of missing data. Inference is processed through a Variational Bayesian Approximation and a Bayesian treatment is adopted for model learning, supervised classification and clustering.


Adversarial Phenomenon in the Eyes of Bayesian Deep Learning

arXiv.org Machine Learning

Deep Learning models are vulnerable to adversarial examples, i.e.\ images obtained via deliberate imperceptible perturbations, such that the model misclassifies them with high confidence. However, class confidence by itself is an incomplete picture of uncertainty. We therefore use principled Bayesian methods to capture model uncertainty in prediction for observing adversarial misclassification. We provide an extensive study with different Bayesian neural networks attacked in both white-box and black-box setups. The behaviour of the networks for noise, attacks and clean test data is compared. We observe that Bayesian neural networks are uncertain in their predictions for adversarial perturbations, a behaviour similar to the one observed for random Gaussian perturbations. Thus, we conclude that Bayesian neural networks can be considered for detecting adversarial examples.


The De-Biased Whittle Likelihood

arXiv.org Machine Learning

The Whittle likelihood is a widely used and computationally efficient pseudo-likelihood. However, it is known to produce biased parameter estimates for large classes of models. We propose a method for de-biasing Whittle estimates for second-order stationary stochastic processes. The de-biased Whittle likelihood can be computed in the same $\mathcal{O}(n\log n)$ operations as the standard approach. We demonstrate the superior performance of the method in simulation studies and in application to a large-scale oceanographic dataset, where in both cases the de-biased approach reduces bias by up to two orders of magnitude, achieving estimates that are close to exact maximum likelihood, at a fraction of the computational cost. We prove that the method yields estimates that are consistent at an optimal convergence rate of $n^{-1/2}$, under weaker assumptions than standard theory, where we do not require that the power spectral density is continuous in frequency. We describe how the method can be easily combined with standard methods of bias reduction, such as tapering and differencing, to further reduce bias in parameter estimates.


Kullback-Leibler Principal Component for Tensors is not NP-hard

arXiv.org Machine Learning

We study the problem of nonnegative rank-one approximation of a nonnegative tensor, and show that the globally optimal solution that minimizes the generalized Kullback-Leibler divergence can be efficiently obtained, i.e., it is not NP-hard. This result works for arbitrary nonnegative tensors with an arbitrary number of modes (including two, i.e., matrices). We derive a closed-form expression for the KL principal component, which is easy to compute and has an intuitive probabilistic interpretation. For generalized KL approximation with higher ranks, the problem is for the first time shown to be equivalent to multinomial latent variable modeling, and an iterative algorithm is derived that resembles the expectation-maximization algorithm. On the Iris dataset, we showcase how the derived results help us learn the model in an \emph{unsupervised} manner, and obtain strikingly close performance to that from supervised methods.


Domain Generalization by Marginal Transfer Learning

arXiv.org Machine Learning

Domain generalization is the problem of assigning class labels to an unlabeled test data set, given several labeled training data sets drawn from similar distributions. This problem arises in several applications where data distributions fluctuate because of biological, technical, or other sources of variation. We develop a distribution-free, kernel-based approach that predicts a classifier from the marginal distribution of features, by leveraging the trends present in related classification tasks. This approach involves identifying an appropriate reproducing kernel Hilbert space and optimizing a regularized empirical risk over the space. We present generalization error analysis, describe universal kernels, and establish universal consistency of the proposed methodology. Experimental results on synthetic data and three real data applications demonstrate the superiority of the method with respect to a pooling strategy.


On the EM-Tau algorithm: a new EM-style algorithm with partial E-steps

arXiv.org Machine Learning

The EM algorithm is one of many important tools in the field of statistics. While often used for imputing missing data, its widespread applications include other common statistical tasks, such as clustering. In clustering, the EM algorithm assumes a parametric distribution for the clusters, whose parameters are estimated through a novel iterative procedure that is based on the theory of maximum likelihood. However, one major drawback of the EM algorithm, that renders it impractical especially when working with large datasets, is that it often requires several passes of the data before convergence. In this paper, we introduce a new EM-style algorithm that implements a novel policy for performing partial E-steps. We call the new algorithm the EM-Tau algorithm, which can approximate the traditional EM algorithm with high accuracy but with only a fraction of the running time.


Jaccard analysis and LASSO-based feature selection for location fingerprinting with limited computational complexity

arXiv.org Machine Learning

We propose an approach to reduce both computational complexity and data storage requirements for the online positioning stage of a fingerprinting-based indoor positioning system (FIPS) by introducing segmentation of the region of interest (RoI) into sub-regions, sub-region selection using a modified Jaccard index, and feature selection based on randomized least absolute shrinkage and selection operator (LASSO). We implement these steps into a Bayesian framework of position estimation using the maximum a posteriori (MAP) principle. An additional benefit of these steps is that the time for estimating the position, and the required data storage are virtually independent of the size of the RoI and of the total number of available features within the RoI. Thus the proposed steps facilitate application of FIPS to large areas. Results of an experimental analysis using real data collected in an office building using a Nexus 6P smart phone as user device and a total station for providing position ground truth corroborate the expected performance of the proposed approach. The positioning accuracy obtained by only processing 10 automatically identified features instead of all available ones and limiting position estimation to 10 automatically identified sub-regions instead of the entire RoI is equivalent to processing all available data. In the chosen example, 50% of the errors are less than 1.8 m and 90% are less than 5 m. However, the computation time using the automatically identified subset of data is only about 1% of that required for processing the entire data set.


Variational Probability Flow for Biologically Plausible Training of Deep Neural Networks

arXiv.org Machine Learning

The quest for biologically plausible deep learning is driven, not just by the desire to explain experimentally-observed properties of biological neural networks, but also by the hope of discovering more efficient methods for training artificial networks. In this paper, we propose a new algorithm named Variational Probably Flow (VPF), an extension of minimum probability flow for training binary Deep Boltzmann Machines (DBMs). We show that weight updates in VPF are local, depending only on the states and firing rates of the adjacent neurons. Unlike contrastive divergence, there is no need for Gibbs confabulations; and unlike backpropagation, alternating feedforward and feedback phases are not required. Moreover, the learning algorithm is effective for training DBMs with intra-layer connections between the hidden nodes. Experiments with MNIST and Fashion MNIST demonstrate that VPF learns reasonable features quickly, reconstructs corrupted images more accurately, and generates samples with a high estimated log-likelihood. Lastly, we note that, interestingly, if an asymmetric version of VPF exists, the weight updates directly explain experimental results in Spike-Timing-Dependent Plasticity (STDP).


The Emergence of Organizing Structure in Conceptual Representation

arXiv.org Machine Learning

Both scientists and children make important structural discoveries, yet their computational underpinnings are not well understood. Structure discovery has previously been formalized as probabilistic inference about the right structural form --- where form could be a tree, ring, chain, grid, etc. [Kemp & Tenenbaum (2008). The discovery of structural form. PNAS, 105(3), 10687-10692]. While this approach can learn intuitive organizations, including a tree for animals and a ring for the color circle, it assumes a strong inductive bias that considers only these particular forms, and each form is explicitly provided as initial knowledge. Here we introduce a new computational model of how organizing structure can be discovered, utilizing a broad hypothesis space with a preference for sparse connectivity. Given that the inductive bias is more general, the model's initial knowledge shows little qualitative resemblance to some of the discoveries it supports. As a consequence, the model can also learn complex structures for domains that lack intuitive description, as well as predict human property induction judgments without explicit structural forms. By allowing form to emerge from sparsity, our approach clarifies how both the richness and flexibility of human conceptual organization can coexist.