Decision Tree Learning
Machine Learning for Quantifier Selection in cvc5
Jakubův, Jan, Janota, Mikoláš, Piepenbrock, Jelle, Urban, Josef
In this work we considerably improve the state-of-the-art SMT solving on first-order quantified problems by efficient machine learning guidance of quantifier selection. Quantifiers represent a significant challenge for SMT and are technically a source of undecidability. In our approach, we train an efficient machine learning model that informs the solver which quantifiers should be instantiated and which not. Each quantifier may be instantiated multiple times and the set of the active quantifiers changes as the solving progresses. Therefore, we invoke the ML predictor many times, during the whole run of the solver. To make this efficient, we use fast ML models based on gradient boosting decision trees. We integrate our approach into the state-of-the-art cvc5 SMT solver and show a considerable increase of the system's holdout-set performance after training it on a large set of first-order problems collected from the Mizar Mathematical Library.
Augmented Functional Random Forests: Classifier Construction and Unbiased Functional Principal Components Importance through Ad-Hoc Conditional Permutations
Maturo, Fabrizio, Porreca, Annamaria
This paper introduces a novel supervised classification strategy that integrates functional data analysis (FDA) with tree-based methods, addressing the challenges of high-dimensional data and enhancing the classification performance of existing functional classifiers. Specifically, we propose augmented versions of functional classification trees and functional random forests, incorporating a new tool for assessing the importance of functional principal components. This tool provides an ad-hoc method for determining unbiased permutation feature importance in functional data, particularly when dealing with correlated features derived from successive derivatives. Our study demonstrates that these additional features can significantly enhance the predictive power of functional classifiers. Experimental evaluations on both real-world and simulated datasets showcase the effectiveness of the proposed methodology, yielding promising results compared to existing methods.
RIFF: Inducing Rules for Fraud Detection from Decision Trees
Martins, João Lucas, Bravo, João, Gomes, Ana Sofia, Soares, Carlos, Bizarro, Pedro
Financial fraud is the cause of multi-billion dollar losses annually. Traditionally, fraud detection systems rely on rules due to their transparency and interpretability, key features in domains where decisions need to be explained. However, rule systems require significant input from domain experts to create and tune, an issue that rule induction algorithms attempt to mitigate by inferring rules directly from data. We explore the application of these algorithms to fraud detection, where rule systems are constrained to have a low false positive rate (FPR) or alert rate, by proposing RIFF, a rule induction algorithm that distills a low FPR rule set directly from decision trees. Our experiments show that the induced rules are often able to maintain or improve performance of the original models for low FPR tasks, while substantially reducing their complexity and outperforming rules hand-tuned by experts.
Randomness control and reproducibility study of random forest algorithm in R and Python
Camadini, Louisa, Bouzid, Yanis, Merlet, Maeva, Carron, Léopold
When it comes to the safety of cosmetic products, compliance with regulatory standards is crucialto guarantee consumer protection against the risks of skin irritation. Toxicologists must thereforebe fully conversant with all risks. This applies not only to their day-to-day work, but also to allthe algorithms they integrate into their routines. Recognizing this, ensuring the reproducibility ofalgorithms becomes one of the most crucial aspects to address.However, how can we prove the robustness of an algorithm such as the random forest, that reliesheavily on randomness? In this report, we will discuss the strategy of integrating random forest intoocular tolerance assessment for toxicologists.We will compare four packages: randomForest and Ranger (R packages), adapted in Python via theSKRanger package, and the widely used Scikit-Learn with the RandomForestClassifier() function.Our goal is to investigate the parameters and sources of randomness affecting the outcomes ofRandom Forest algorithms.By setting comparable parameters and using the same Pseudo-Random Number Generator (PRNG),we expect to reproduce results consistently across the various available implementations of therandom forest algorithm. Nevertheless, this exploration will unveil hidden layers of randomness andguide our understanding of the critical parameters necessary to ensure reproducibility across all fourimplementations of the random forest algorithm.
Demystifying Functional Random Forests: Novel Explainability Tools for Model Transparency in High-Dimensional Spaces
Maturo, Fabrizio, Porreca, Annamaria
The advent of big data has raised significant challenges in analysing high-dimensional datasets across various domains such as medicine, ecology, and economics. Functional Data Analysis (FDA) has proven to be a robust framework for addressing these challenges, enabling the transformation of high-dimensional data into functional forms that capture intricate temporal and spatial patterns. However, despite advancements in functional classification methods and very high performance demonstrated by combining FDA and ensemble methods, a critical gap persists in the literature concerning the transparency and interpretability of black-box models, e.g. Functional Random Forests (FRF). In response to this need, this paper introduces a novel suite of explainability tools to illuminate the inner mechanisms of FRF. We propose using Functional Partial Dependence Plots (FPDPs), Functional Principal Component (FPC) Probability Heatmaps, various model-specific and model-agnostic FPCs' importance metrics, and the FPC Internal-External Importance and Explained Variance Bubble Plot. These tools collectively enhance the transparency of FRF models by providing a detailed analysis of how individual FPCs contribute to model predictions. By applying these methods to an ECG dataset, we demonstrate the effectiveness of these tools in revealing critical patterns and improving the explainability of FRF.
OPTDTALS: Approximate Logic Synthesis via Optimal Decision Trees Approach
The growing interest in Explainable Artificial Intelligence (XAI) motivates promising studies of computing optimal Interpretable Machine Learning models, especially decision trees. Such models generally provide optimality in compact size or empirical accuracy. Recent works focus on improving efficiency due to the natural scalability issue. The application of such models to practical problems is quite limited. As an emerging problem in circuit design, Approximate Logic Synthesis (ALS) aims to reduce circuit complexity by sacrificing correctness. Recently, multiple heuristic machine learning methods have been applied in ALS, which learns approximated circuits from samples of input-output pairs. In this paper, we propose a new ALS methodology realizing the approximation via learning optimal decision trees in empirical accuracy. Compared to previous heuristic ALS methods, the guarantee of optimality achieves a more controllable trade-off between circuit complexity and accuracy. Experimental results show clear improvements in our methodology in the quality of approximated designs (circuit complexity and accuracy) compared to the state-of-the-art approaches.
Simplifying Random Forests' Probabilistic Forecasts
Since their introduction by Breiman, Random Forests (RFs) have proven to be useful for both classification and regression tasks. The RF prediction of a previously unseen observation can be represented as a weighted sum of all training sample observations. This nearest-neighbor-type representation is useful, among other things, for constructing forecast distributions (Meinshausen, 2006). In this paper, we consider simplifying RF-based forecast distributions by sparsifying them. That is, we focus on a small subset of nearest neighbors while setting the remaining weights to zero. This sparsification step greatly improves the interpretability of RF predictions. It can be applied to any forecasting task without re-training existing RF models. In empirical experiments, we document that the simplified predictions can be similar to or exceed the original ones in terms of forecasting performance. We explore the statistical sources of this finding via a stylized analytical model of RFs. The model suggests that simplification is particularly promising if the unknown true forecast distribution contains many small weights that are estimated imprecisely.
Optimizing Interpretable Decision Tree Policies for Reinforcement Learning
Reinforcement learning techniques leveraging deep learning have made tremendous progress in recent years. However, the complexity of neural networks prevents practitioners from understanding their behavior. Decision trees have gained increased attention in supervised learning for their inherent interpretability, enabling modelers to understand the exact prediction process after learning. This paper considers the problem of optimizing interpretable decision tree policies to replace neural networks in reinforcement learning settings. Previous works have relaxed the tree structure, restricted to optimizing only tree leaves, or applied imitation learning techniques to approximately copy the behavior of a neural network policy with a decision tree. We propose the Decision Tree Policy Optimization (DTPO) algorithm that directly optimizes the complete decision tree using policy gradients. Our technique uses established decision tree heuristics for regression to perform policy optimization. We empirically show that DTPO is a competitive algorithm compared to imitation learning algorithms for optimizing decision tree policies in reinforcement learning.
Vanilla Gradient Descent for Oblique Decision Trees
Panda, Subrat Prasad, Genest, Blaise, Easwaran, Arvind, Suganthan, Ponnuthurai Nagaratnam
Decision Trees (DTs) constitute one of the major highly non-linear AI models, valued, e.g., for their efficiency on tabular data. Learning accurate DTs is, however, complicated, especially for oblique DTs, and does take a significant training time. Further, DTs suffer from overfitting, e.g., they proverbially "do not generalize" in regression tasks. Recently, some works proposed ways to make (oblique) DTs differentiable. This enables highly efficient gradient-descent algorithms to be used to learn DTs. It also enables generalizing capabilities by learning regressors at the leaves simultaneously with the decisions in the tree. Prior approaches to making DTs differentiable rely either on probabilistic approximations at the tree's internal nodes (soft DTs) or on approximations in gradient computation at the internal node (quantized gradient descent). In this work, we propose DTSemNet, a novel semantically equivalent and invertible encoding for (hard, oblique) DTs as Neural Networks (NNs), that uses standard vanilla gradient descent. Experiments across various classification and regression benchmarks show that oblique DTs learned using DTSemNet are more accurate than oblique DTs of similar size learned using state-of-the-art techniques. Further, DT training time is significantly reduced. We also experimentally demonstrate that DTSemNet can learn DT policies as efficiently as NN policies in the Reinforcement Learning (RL) setup with physical inputs (dimensions $\leq32$). The code is available at {\color{blue}\textit{\url{https://github.com/CPS-research-group/dtsemnet}}}.
Evaluation Framework for AI-driven Molecular Design of Multi-target Drugs: Brain Diseases as a Case Study
Cerveira, Arthur, Kremer, Frederico, Lourenço, Darling de Andrade, Corrêa, Ulisses B
The widespread application of Artificial Intelligence (AI) techniques has significantly influenced the development of new therapeutic agents. These computational methods can be used to design and predict the properties of generated molecules. Multi-target Drug Discovery (MTDD) is an emerging paradigm for discovering drugs against complex disorders that do not respond well to more traditional target-specific treatments, such as central nervous system, immune system, and cardiovascular diseases. Still, there is yet to be an established benchmark suite for assessing the effectiveness of AI tools for designing multi-target compounds. Standardized benchmarks allow for comparing existing techniques and promote rapid research progress. Hence, this work proposes an evaluation framework for molecule generation techniques in MTDD scenarios, considering brain diseases as a case study. Our methodology involves using large language models to select the appropriate molecular targets, gathering and preprocessing the bioassay datasets, training quantitative structure-activity relationship models to predict target modulation, and assessing other essential drug-likeness properties for implementing the benchmarks. Additionally, this work will assess the performance of four deep generative models and evolutionary algorithms over our benchmark suite. In our findings, both evolutionary algorithms and generative models can achieve competitive results across the proposed benchmarks.