Flow cytometry is often used to characterize the malignant cells in leukemia and lymphoma patients, traced to the level of the individual cell. Typically, flow cytometric data analysis is performed through a series of 2-dimensional projections onto the axes of the data set. Through the years, clinicians have determined combinations of different fluorescent markers which generate relatively known expression patterns for specific subtypes of leukemia and lymphoma -- cancers of the hematopoietic system. By only viewing a series of 2-dimensional projections, the high-dimensional nature of the data is rarely exploited. In this paper we present a means of determining a low-dimensional projection which maintains the high-dimensional relationships (i.e. information) between differing oncological data sets. By using machine learning techniques, we allow clinicians to visualize data in a low dimension defined by a linear combination of all of the available markers, rather than just 2 at a time. This provides an aid in diagnosing similar forms of cancer, as well as a means for variable selection in exploratory flow cytometric research. We refer to our method as Information Preserving Component Analysis (IPCA).

A first-order conditional logic is considered, with semantics given by a variant of ǫ-semantics (Adams 1975; Goldszmidt & Pearl 1992), where ϕ ψ means that Pr(ψ ϕ) approaches 1 super-polynomially--faster than any inverse polynomial. This type of convergence is needed for reasoning about security protocols. A complete axiomatization is provided for this semantics, and it is shown how a qualitative proof of the correctness of a security protocol can be automatically converted to a quantitative proof appropriate for reasoning about concrete security.

We discuss a generic model of Bayesian inference with binary variables defined on edges of a planar graph. The Loop Calculus approach of [1, 2] is used to evaluate the resulting series expansion for the partition function. We show that, for planar graphs, truncating the series at single-connected loops reduces, via a map reminiscent of the Fisher transformation [3], to evaluating the partition function of the dimer matching model on an auxiliary planar graph. Thus, the truncated series can be easily re-summed, using the Pfaffian formula of Kasteleyn [4]. This allows to identify a big class of computationally tractable planar models reducible to a dimer model via the Belief Propagation (gauge) transformation. The Pfaffian representation can also be extended to the full Loop Series, in which case the expansion becomes a sum of Pfaffian contributions, each associated with dimer matchings on an extension to a subgraph of the original graph. Algorithmic consequences of the Pfaffian representation, as well as relations to quantum and non-planar models, are discussed.

We provide deterministic, polynomial-time computable voting rules that approximate Dodgson's and (the ``minimization version'' of) Young's scoring rules to within a logarithmic factor. Our approximation of Dodgson's rule is tight up to a constant factor, as Dodgson's rule is $\NP$-hard to approximate to within some logarithmic factor. The ``maximization version'' of Young's rule is known to be $\NP$-hard to approximate by any constant factor. Both approximations are simple, and natural as rules in their own right: Given a candidate we wish to score, we can regard either its Dodgson or Young score as the edit distance between a given set of voter preferences and one in which the candidate to be scored is the Condorcet winner. (The difference between the two scoring rules is the type of edits allowed.) We regard the marginal cost of a sequence of edits to be the number of edits divided by the number of reductions (in the candidate's deficit against any of its opponents in the pairwise race against that opponent) that the edits yield. Over a series of rounds, our scoring rules greedily choose a sequence of edits that modify exactly one voter's preferences and whose marginal cost is no greater than any other such single-vote-modifying sequence.

The term "Geometric Data Analysis" is due to Patrick Suppes (Stanford) who writes a Foreword for this encyclopedic view of Correspondence Analysis. The uniqueness of this work lies in the detailed conceptual framework, and in showing how, where and why statistical inference methods come into play.

Recent catastrophic disasters have brought urgent needs for diverse technologies for disaster relief. Currently, there is an overwhelming need for better information technology to help support the efficient and the effective management of the disaster management (also known as emergency response). In particular, actors and agencies need an assistance to help them to make a decision in a fashion time and to be able to coordinate their efforts in a flexible way in order to prevent further problems or effectively manage the aftermath of a disaster. Our project is situated in this context and consists to develop a generic Decision Support System (DSS), able to detect a risk in an uncertain and partially perceived environment and to prevent its evolution. The DSS kernel is a multiagent system with three layers, where each one has a specific role. The role of the lower layer, that we call the representation layer, is to represent the environment state and its evolution over the time. The environment is perceived as a whole of entities, directly or indirectly observable and of which states change permanently. These entities are modeled according to a taxonomic organisa-Laboratoire d'Informatique, de Traitement de l'Information et des Systèmes, University of Le Havre, 25 rue Philippe Lebon, 76058, Le Havre Cedex, France.

Artificial Immune Systems have been used successfully to build recommender systems for film databases. In this research, an attempt is made to extend this idea to web site recommendation. A collection of more than 1000 individuals web profiles (alternatively called preferences / favourites / bookmarks file) will be used. URLs will be classified using the DMOZ (Directory Mozilla) database of the Open Directory Project as our ontology. This will then be used as the data for the Artificial Immune Systems rather than the actual addresses. The first attempt will involve using a simple classification code number coupled with the number of pages within that classification code. However, this implementation does not make use of the hierarchical tree-like structure of DMOZ. Consideration will then be given to the construction of a similarity measure for web profiles that makes use of this hierarchical information to build a better-informed Artificial Immune System.

This paper describes application of information granulation theory, on the analysis of "lugeon data". In this manner, using a combining of Self Organizing Map (SOM) and Neuro-Fuzzy Inference System (NFIS), crisp and fuzzy granules are obtained. Balancing of crisp granules and sub- fuzzy granules, within non fuzzy information (initial granulation), is rendered in open-close iteration. Using two criteria, "simplicity of rules "and "suitable adaptive threshold error level", stability of algorithm is guaranteed. In other part of paper, rough set theory (RST), to approximate analysis, has been employed >.Validation of the proposed methods, on the large data set of in-situ permeability in rock masses, in the Shivashan dam, Iran, has been highlighted. By the implementation of the proposed algorithm on the lugeon data set, was proved the suggested method, relating the approximate analysis on the permeability, could be applied.

This paper pursues some applications of Rough Set Theory (RST) and neural-fuzzy model to analysis of "lugeon data". In the manner, using Self Organizing Map (SOM) as a pre-processing the data are scaled and then the dominant rules by RST, are elicited. Based on these rules variations of permeability in the different levels of Shivashan dam, Iran has been highlighted. Then, via using a combining of SOM and an adaptive Neuro-Fuzzy Inference System (NFIS) another analysis on the data was carried out. Finally, a brief comparison between the obtained results of RST and SOM-NFIS (briefly SONFIS) has been rendered.

Artificial intelligence research is ushering in a new era of sophisticated, mass-market transportation technology. While computers can already fly a passenger jet better than a trained human pilot, people are still faced with the dangerous yet tedious task of driving automobiles. Intelligent Transportation Systems (ITS) is the field that focuses on integrating information technology with vehicles and transportation infrastructure to make transportation safer, cheaper, and more efficient. Recent advances in ITS point to a future in which vehicles themselves handle the vast majority of the driving task. Once autonomous vehicles become popular, autonomous interactions amongst multiple vehicles will be possible. Current methods of vehicle coordination, which are all designed to work with human drivers, will be outdated. The bottleneck for roadway efficiency will no longer be the drivers, but rather the mechanism by which those drivers' actions are coordinated. While open-road driving is a well-studied and more-or-less-solved problem, urban traffic scenarios, especially intersections, are much more challenging. We believe current methods for controlling traffic, specifically at intersections, will not be able to take advantage of the increased sensitivity and precision of autonomous vehicles as compared to human drivers. In this article, we suggest an alternative mechanism for coordinating the movement of autonomous vehicles through intersections. Drivers and intersections in this mechanism are treated as autonomous agents in a multiagent system. In this multiagent system, intersections use a new reservation-based approach built around a detailed communication protocol, which we also present. We demonstrate in simulation that our new mechanism has the potential to significantly outperform current intersection control technology -- traffic lights and stop signs. Because our mechanism can emulate a traffic light or stop sign, it subsumes the most popular current methods of intersection control. This article also presents two extensions to the mechanism. The first extension allows the system to control human-driven vehicles in addition to autonomous vehicles. The second gives priority to emergency vehicles without significant cost to civilian vehicles. The mechanism, including both extensions, is implemented and tested in simulation, and we present experimental results that strongly attest to the efficacy of this approach.