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Group-sparse Matrix Recovery

arXiv.org Machine Learning

We apply the OSCAR (octagonal selection and clustering algorithms for regression) in recovering group-sparse matrices (two-dimensional---2D---arrays) from compressive measurements. We propose a 2D version of OSCAR (2OSCAR) consisting of the $\ell_1$ norm and the pair-wise $\ell_{\infty}$ norm, which is convex but non-differentiable. We show that the proximity operator of 2OSCAR can be computed based on that of OSCAR. The 2OSCAR problem can thus be efficiently solved by state-of-the-art proximal splitting algorithms. Experiments on group-sparse 2D array recovery show that 2OSCAR regularization solved by the SpaRSA algorithm is the fastest choice, while the PADMM algorithm (with debiasing) yields the most accurate results.


A novel sparsity and clustering regularization

arXiv.org Machine Learning

We propose a novel SPARsity and Clustering (SPARC) regularizer, which is a modified version of the previous octagonal shrinkage and clustering algorithm for regression (OSCAR), where, the proposed regularizer consists of a $K$-sparse constraint and a pair-wise $\ell_{\infty}$ norm restricted on the $K$ largest components in magnitude. The proposed regularizer is able to separably enforce $K$-sparsity and encourage the non-zeros to be equal in magnitude. Moreover, it can accurately group the features without shrinking their magnitude. In fact, SPARC is closely related to OSCAR, so that the proximity operator of the former can be efficiently computed based on that of the latter, allowing using proximal splitting algorithms to solve problems with SPARC regularization. Experiments on synthetic data and with benchmark breast cancer data show that SPARC is a competitive group-sparsity inducing regularizer for regression and classification.


The Application of Imperialist Competitive Algorithm for Fuzzy Random Portfolio Selection Problem

arXiv.org Artificial Intelligence

This paper presents an implementation of the Imperialist Competitive Algorithm (ICA) for solving the fuzzy random portfolio selection problem where the asset returns are represented by fuzzy random variables. Portfolio Optimization is an important research field in modern finance. By using the necessity-based model, fuzzy random variables reformulate to the linear programming and ICA will be designed to find the optimum solution. To show the efficiency of the proposed method, a numerical example illustrates the whole idea on implementation of ICA for fuzzy random portfolio selection problem.


Efficient Inference of Gaussian Process Modulated Renewal Processes with Application to Medical Event Data

arXiv.org Machine Learning

The episodic, irregular and asynchronous nature of medical data render them difficult substrates for standard machine learning algorithms. We would like to abstract away this difficulty for the class of time-stamped categorical variables (or events) by modeling them as a renewal process and inferring a probability density over continuous, longitudinal, nonparametric intensity functions modulating that process. Several methods exist for inferring such a density over intensity functions, but either their constraints and assumptions prevent their use with our potentially bursty event streams, or their time complexity renders their use intractable on our long-duration observations of high-resolution events, or both. In this paper we present a new and efficient method for inferring a distribution over intensity functions that uses direct numeric integration and smooth interpolation over Gaussian processes. We demonstrate that our direct method is up to twice as accurate and two orders of magnitude more efficient than the best existing method (thinning). Importantly, the direct method can infer intensity functions over the full range of bursty to memoryless to regular events, which thinning and many other methods cannot. Finally, we apply the method to clinical event data and demonstrate the face-validity of the abstraction, which is now amenable to standard learning algorithms.


Sparse Quantile Huber Regression for Efficient and Robust Estimation

arXiv.org Machine Learning

We consider new formulations and methods for sparse quantile regression in the high-dimensional setting. Quantile regression plays an important role in many applications, including outlier-robust exploratory analysis in gene selection. In addition, the sparsity consideration in quantile regression enables the exploration of the entire conditional distribution of the response variable given the predictors and therefore yields a more comprehensive view of the important predictors. We propose a generalized OMP algorithm for variable selection, taking the misfit loss to be either the traditional quantile loss or a smooth version we call quantile Huber, and compare the resulting greedy approaches with convex sparsity-regularized formulations. We apply a recently proposed interior point methodology to efficiently solve all convex formulations as well as convex subproblems in the generalized OMP setting, pro- vide theoretical guarantees of consistent estimation, and demonstrate the performance of our approach using empirical studies of simulated and genomic datasets.


Learning the Parameters of Determinantal Point Process Kernels

arXiv.org Machine Learning

Determinantal point processes (DPPs) are well-suited for modeling repulsion and have proven useful in many applications where diversity is desired. While DPPs have many appealing properties, such as efficient sampling, learning the parameters of a DPP is still considered a difficult problem due to the non-convex nature of the likelihood function. In this paper, we propose using Bayesian methods to learn the DPP kernel parameters. These methods are applicable in large-scale and continuous DPP settings even when the exact form of the eigendecomposition is unknown. We demonstrate the utility of our DPP learning methods in studying the progression of diabetic neuropathy based on spatial distribution of nerve fibers, and in studying human perception of diversity in images.


Near-optimal-sample estimators for spherical Gaussian mixtures

arXiv.org Machine Learning

Statistical and machine-learning algorithms are frequently applied to high-dimensional data. In many of these applications data is scarce, and often much more costly than computation time. We provide the first sample-efficient polynomial-time estimator for high-dimensional spherical Gaussian mixtures. For mixtures of any $k$ $d$-dimensional spherical Gaussians, we derive an intuitive spectral-estimator that uses $\mathcal{O}_k\bigl(\frac{d\log^2d}{\epsilon^4}\bigr)$ samples and runs in time $\mathcal{O}_{k,\epsilon}(d^3\log^5 d)$, both significantly lower than previously known. The constant factor $\mathcal{O}_k$ is polynomial for sample complexity and is exponential for the time complexity, again much smaller than what was previously known. We also show that $\Omega_k\bigl(\frac{d}{\epsilon^2}\bigr)$ samples are needed for any algorithm. Hence the sample complexity is near-optimal in the number of dimensions. We also derive a simple estimator for one-dimensional mixtures that uses $\mathcal{O}\bigl(\frac{k \log \frac{k}{\epsilon} }{\epsilon^2} \bigr)$ samples and runs in time $\widetilde{\mathcal{O}}\left(\bigl(\frac{k}{\epsilon}\bigr)^{3k+1}\right)$. Our other technical contributions include a faster algorithm for choosing a density estimate from a set of distributions, that minimizes the $\ell_1$ distance to an unknown underlying distribution.


Retrieval of Experiments by Efficient Estimation of Marginal Likelihood

arXiv.org Machine Learning

An experiment is an organized procedure for validating a hypothesis, and usually comprises measurements over a set of variables that are either varied (covariates or independent variables) or studied (outcomes or dependent variables). For example, in the study of genome-wide association, one explores the association between'traits' (controlled variable) and common genetic variations (response variables) [1], or in the study of functional genomics covariates can be the species, disease state, and cell type, whereas outcome can be microarray measurements [2]. Traditionally, similar experiments have been retrieved from qualitative assessment of related scientific documents without explicitly handling the experimental data. Recent technological advances have allowed researchers to both acquire measurements in an unprecedented scale throughout the globe, and to release these measurements for public use after curation, e.g., [3]. However, exploring similar experiments still relies on comparing the manual annotations which suffer extensively from variations in terminology, and incompleteness in annotations, e.g., [4]. The global effort of availing researchers with wealth of data invites the need for sophisticated retrieval systems that look beyond annotations in comparing related experiments to improve accessibility. The next step toward this goal is to compare the knowledge acquired from experimental measurements rather than just annotations.


Deep learning for neuroimaging: a validation study

arXiv.org Machine Learning

Vince D. Calhoun The Mind Research Network Albuquerque, NM 87106 vcalhoun@mrn.org Deep learning methods have recently made notable advances in the tasks of classification and representation learning. These tasks are important for brain imaging and neuroscience discovery, making the methods attractive for porting to a neuroimager's toolbox. Success of these methods is, in part, explained by the flexibility of deep learning models. However, this flexibility makes the process of porting to new areas a difficult parameter optimization problem. In this work we demonstrate our results (and feasible parameter ranges) in application of deep learning methods to structural and functional brain imaging data. We also describe a novel constraint-based approach to visualizing high dimensional data. We use it to analyze the effect of parameter choices on data transformations. Our results show that deep learning methods are able to learn physiologically important representations and detect latent relations in neuroimaging data.


Analysis of Multibeam SONAR Data using Dissimilarity Representations

arXiv.org Machine Learning

This paper considers the problem of low-dimensional visualisation of very high dimensional information sources for the purpose of situation awareness in the maritime environment. In response to the requirement for human decision support aids to reduce information overload (and specifically, data amenable to inter-point relative similarity measures) appropriate to the below-water maritime domain, we are investigating a preliminary prototype topographic visualisation model. The focus of the current paper is on the mathematical problem of exploiting a relative dissimilarity representation of signals in a visual informatics mapping model, driven by real-world sonar systems. An independent source model is used to analyse the sonar beams from which a simple probabilistic input model to represent uncertainty is mapped to a latent visualisation space where data uncertainty can be accommodated. The use of euclidean and non-euclidean measures are used and the motivation for future use of non-euclidean measures is made. Concepts are illustrated using a simulated 64 beam weak SNR dataset with realistic sonar targets.