We study consistency of learning algorithms for a multi-class performance metric that is a non-decomposable function of the confusion matrix of a classifier and cannot be expressed as a sum of losses on individual data points; examples of such performance metrics include the macro F-measure popular in information retrieval and the G-mean metric used in class-imbalanced problems. While there has been much work in recent years in understanding the consistency properties of learning algorithms for `binary' non-decomposable metrics, little is known either about the form of the optimal classifier for a general multi-class non-decomposable metric, or about how these learning algorithms generalize to the multi-class case. In this paper, we provide a unified framework for analysing a multi-class non-decomposable performance metric, where the problem of finding the optimal classifier for the performance metric is viewed as an optimization problem over the space of all confusion matrices achievable under the given distribution. Using this framework, we show that (under a continuous distribution) the optimal classifier for a multi-class performance metric can be obtained as the solution of a cost-sensitive classification problem, thus generalizing several previous results on specific binary non-decomposable metrics. We then design a consistent learning algorithm for concave multi-class performance metrics that proceeds via a sequence of cost-sensitive classification problems, and can be seen as applying the conditional gradient (CG) optimization method over the space of feasible confusion matrices. To our knowledge, this is the first efficient learning algorithm (whose running time is polynomial in the number of classes) that is consistent for a large family of multi-class non-decomposable metrics. Our consistency proof uses a novel technique based on the convergence analysis of the CG method.

The Generic Viewpoint Assumption (GVA) states that the position of the viewer or the light in a scene is not special. Thus, any estimated parameters from an observation should be stable under small perturbations such as object, viewpoint or light positions. The GVA has been analyzed and quantified in previous works, but has not been put to practical use in actual vision tasks. In this paper, we show how to utilize the GVA to estimate shape and illumination from a single shading image, without the use of other priors. We propose a novel linearized Spherical Harmonics (SH) shading model which enables us to obtain a computationally efficient form of the GVA term. Together with a data term, we build a model whose unknowns are shape and SH illumination. The model parameters are estimated using the Alternating Direction Method of Multipliers embedded in a multi-scale estimation framework. In this prior-free framework, we obtain competitive shape and illumination estimation results under a variety of models and lighting conditions, requiring fewer assumptions than competing methods.

Learning the dependency structure between spatially distributed observations of a spatio-temporal process is an important problem in many fields such as geology, geophysics, atmospheric sciences, oceanography, etc. . However, estimation of such systems is complicated by the fact that they exhibit dynamics at multiple scales of space and time arising due to a combination of diffusion and convection/advection. As we show, time-series graphical models based on vector auto-regressive processes are inefficient in capturing such multi-scale structure. In this paper, we present a hierarchical graphical model with physically derived priors that better represents the multi-scale character of these dynamical systems. We also propose algorithms to efficiently estimate the interaction structure from data. We demonstrate results on a general class of problems arising in exploration geophysics by discovering graphical structure that is physically meaningful and provide evidence of its advantages over alternative approaches.

We introduce a new multi-task framework, in which $K$ online learners are sharing a single annotator with limited bandwidth. On each round, each of the $K$ learners receives an input, and makes a prediction about the label of that input. Then, a shared (stochastic) mechanism decides which of the $K$ inputs will be annotated. The learner that receives the feedback (label) may update its prediction rule, and we proceed to the next round. We develop an online algorithm for multi-task binary classification that learns in this setting, and bound its performance in the worst-case setting. Additionally, we show that our algorithm can be used to solve two bandits problems: contextual bandits, and dueling bandits with context, both allowed to decouple exploration and exploitation. Empirical study with OCR data, vowel prediction (VJ project) and document classification, shows that our algorithm outperforms other algorithms, one of which uses uniform allocation, and essentially makes more (accuracy) for the same labour of the annotator.

Computing the partition function (i.e., the normalizing constant) of a given pairwise binary graphical model is NP-hard in general. As a result, the partition function is typically estimated by approximate inference algorithms such as belief propagation (BP) and tree-reweighted belief propagation (TRBP). The former provides reasonable estimates in practice but has convergence issues. The later has better convergence properties but typically provides poorer estimates. In this work, we propose a novel scheme that has better convergence properties than BP and provably provides better partition function estimates in many instances than TRBP. In particular, given an arbitrary pairwise binary graphical model, we construct a specific ``attractive'' 2-cover. We explore the properties of this special cover and show that it can be used to construct an algorithm with the desired properties.

Fluorescent calcium imaging provides a potentially powerful tool for inferring connectivity in neural circuits with up to thousands of neurons. However, a key challenge in using calcium imaging for connectivity detection is that current systems often have a temporal response and frame rate that can be orders of magnitude slower than the underlying neural spiking process. Bayesian inference based on expectation-maximization (EM) have been proposed to overcome these limitations, but they are often computationally demanding since the E-step in the EM procedure typically involves state estimation in a high-dimensional nonlinear dynamical system. In this work, we propose a computationally fast method for the state estimation based on a hybrid of loopy belief propagation and approximate message passing (AMP). The key insight is that a neural system as viewed through calcium imaging can be factorized into simple scalar dynamical systems for each neuron with linear interconnections between the neurons. Using the structure, the updates in the proposed hybrid AMP methodology can be computed by a set of one-dimensional state estimation procedures and linear transforms with the connectivity matrix. This yields a computationally scalable method for inferring connectivity of large neural circuits. Simulations of the method on realistic neural networks demonstrate good accuracy with computation times that are potentially significantly faster than current approaches based on Markov Chain Monte Carlo methods.

Most work on sequential learning assumes a fixed set of actions that are available all the time. However, in practice, actions can consist of picking subsets of readings from sensors that may break from time to time, road segments that can be blocked or goods that are out of stock. In this paper we study learning algorithms that are able to deal with stochastic availability of such unreliable composite actions. We propose and analyze algorithms based on the Follow-The-Perturbed-Leader prediction method for several learning settings differing in the feedback provided to the learner. Our algorithms rely on a novel loss estimation technique that we call Counting Asleep Times. We deliver regret bounds for our algorithms for the previously studied full information and (semi-)bandit settings, as well as a natural middle point between the two that we call the restricted information setting. A special consequence of our results is a significant improvement of the best known performance guarantees achieved by an efficient algorithm for the sleeping bandit problem with stochastic availability. Finally, we evaluate our algorithms empirically and show their improvement over the known approaches.

One of the most fundamental problems in causal inference is the estimation of a causal effect when variables are confounded. This is difficult in an observational study because one has no direct evidence that all confounders have been adjusted for. We introduce a novel approach for estimating causal effects that exploits observational conditional independencies to suggest ``weak'' paths in a unknown causal graph. The widely used faithfulness condition of Spirtes et al. is relaxed to allow for varying degrees of ``path cancellations'' that will imply conditional independencies but do not rule out the existence of confounding causal paths. The outcome is a posterior distribution over bounds on the average causal effect via a linear programming approach and Bayesian inference. We claim this approach should be used in regular practice to complement other default tools in observational studies.

Neural responses in visual cortex are influenced by visual stimuli and by ongoing spiking activity in local circuits. An important challenge in computational neuroscience is to develop models that can account for both of these features in large multi-neuron recordings and to reveal how stimulus representations interact with and depend on cortical dynamics. Here we introduce a statistical model of neural population activity that integrates a nonlinear receptive field model with a latent dynamical model of ongoing cortical activity. This model captures the temporal dynamics, effective network connectivity in large population recordings, and correlations due to shared stimulus drive as well as common noise. Moreover, because the nonlinear stimulus inputs are mixed by the ongoing dynamics, the model can account for a relatively large number of idiosyncratic receptive field shapes with a small number of nonlinear inputs to a low-dimensional latent dynamical model. We introduce a fast estimation method using online expectation maximization with Laplace approximations. Inference scales linearly in both population size and recording duration. We apply this model to multi-channel recordings from primary visual cortex and show that it accounts for a large number of individual neural receptive fields using a small number of nonlinear inputs and a low-dimensional dynamical model.

While topic models can discover patterns of word usage in large corpora, it is difficult to meld this unsupervised structure with noisy, human-provided labels, especially when the label space is large. In this paper, we present a model-Label to Hierarchy (L2H)-that can induce a hierarchy of user-generated labels and the topics associated with those labels from a set of multi-labeled documents. The model is robust enough to account for missing labels from untrained, disparate annotators and provide an interpretable summary of an otherwise unwieldy label set. We show empirically the effectiveness of L2H in predicting held-out words and labels for unseen documents.