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Patterns for Learning with Side Information

arXiv.org Machine Learning

Supervised, semi-supervised, and unsupervised learning estimate a function given input/output samples. Generalization of the learned function to unseen data can be improved by incorporating side information into learning. Side information are data that are neither from the input space nor from the output space of the function, but include useful information for learning it. In this paper we show that learning with side information subsumes a variety of related approaches, e.g. multi-task learning, multi-view learning and learning using privileged information. Our main contributions are (i) a new perspective that connects these previously isolated approaches, (ii) insights about how these methods incorporate different types of prior knowledge, and hence implement different patterns, (iii) facilitating the application of these methods in novel tasks, as well as (iv) a systematic experimental evaluation of these patterns in two supervised learning tasks.


Peer Grading in a Course on Algorithms and Data Structures: Machine Learning Algorithms do not Improve over Simple Baselines

arXiv.org Machine Learning

Peer grading is the process of students reviewing each others' work, such as homework submissions, and has lately become a popular mechanism used in massive open online courses (MOOCs). Intrigued by this idea, we used it in a course on algorithms and data structures at the University of Hamburg. Throughout the whole semester, students repeatedly handed in submissions to exercises, which were then evaluated both by teaching assistants and by a peer grading mechanism, yielding a large dataset of teacher and peer grades. We applied different statistical and machine learning methods to aggregate the peer grades in order to come up with accurate final grades for the submissions (supervised and unsupervised, methods based on numeric scores and ordinal rankings). Surprisingly, none of them improves over the baseline of using the mean peer grade as the final grade. We discuss a number of possible explanations for these results and present a thorough analysis of the generated dataset.


Empirical Bayes Estimation for the Stochastic Blockmodel

arXiv.org Machine Learning

The stochastic blockmodel (SBM) is a generative model for network data introduced in Holland et al. (1983). The SBM is a member of the general class of latent position random graph models introduced in Hoff et al. (2002). These models have been used in various application domains as diverse as social networks (vertices may represent people with edges indicating social interaction), citation networks (who cites whom), connectomics (brain connectivity networks; vertices may represent neurons with edges indicating axon-synapse-dendrite connections, or vertices may represent brain regions with edges indicating connectivity between regions), and many others. For comprehensive reviews of statistical models and applications, see Fienberg (2010), Goldenberg et al. (2010), Fienberg (2012). In general, statistical inference on graphs is becoming essential in many areas of science, engineering, and business. The SBM supposes that each of n vertices is assigned to one of K blocks. The probability of an 1 edge between two vertices depends only on their respective block memberships, and the presence of edges are conditionally independent given block memberships.


Multi-view Kernel Completion

arXiv.org Machine Learning

In this paper, we introduce the first method that (1) can complete kernel matrices with completely missing rows and columns as opposed to individual missing kernel values, (2) does not require any of the kernels to be complete a priori, and (3) can tackle non-linear kernels. These aspects are necessary in practical applications such as integrating legacy data sets, learning under sensor failures and learning when measurements are costly for some of the views. The proposed approach predicts missing rows by modelling both within-view and between-view relationships among kernel values. We show, both on simulated data and real world data, that the proposed method outperforms existing techniques in the restricted settings where they are available, and extends applicability to new settings.


Compliance-Aware Bandits

arXiv.org Machine Learning

Motivated by clinical trials, we study bandits with observable non-compliance. At each step, the learner chooses an arm, after, instead of observing only the reward, it also observes the action that took place. We show that such noncompliance can be helpful or hurtful to the learner in general. Unfortunately, naively incorporating compliance information into bandit algorithms loses guarantees on sublinear regret. We present hybrid algorithms that maintain regret bounds up to a multiplicative factor and can incorporate compliance information. Simulations based on real data from the International Stoke Trial show the practical potential of these algorithms.


Collaborative filtering via sparse Markov random fields

arXiv.org Machine Learning

Recommender systems play a central role in providing individualized access to information and services. This paper focuses on collaborative filtering, an approach that exploits the shared structure among mind-liked users and similar items. In particular, we focus on a formal probabilistic framework known as Markov random fields (MRF). We address the open problem of structure learning and introduce a sparsity-inducing algorithm to automatically estimate the interaction structures between users and between items. Item-item and user-user correlation networks are obtained as a by-product. Large-scale experiments on movie recommendation and date matching datasets demonstrate the power of the proposed method.


Compressed Online Dictionary Learning for Fast fMRI Decomposition

arXiv.org Machine Learning

ABSTRACT We present a method for fast resting-state fMRI spatial decompositions of very large datasets, based on the reduction of the temporal dimension before applying dictionary learning on concatenated individual records from groups of subjects. Introducing a measure of correspondence between spatial decompositions of rest fMRI, we demonstrates that time-reduced dictionary learning produces result as reliable as non-reduced decompositions. We also show that this reduction significantly improves computational scalability. Index Terms-- resting-state fMRI, sparse decomposition, dictionary learning, online learning, rangefinder 1. INTRODUCTION Resting-state fMRI data analysis traditionally implies, as an initial step, to decompose a set of raw 4D records (time-series sampled in a volumic voxel grid) into a sum of spatially located functional networks that isolate a part of the brain signals. Functional networks, that can be seen as a set of brain activation maps, form a relevant basis for the experiment signals that captures its essence in a low-dimensional space.


Network Inference by Learned Node-Specific Degree Prior

arXiv.org Machine Learning

We propose a novel method for network inference from partially observed edges using a node-specific degree prior. The degree prior is derived from observed edges in the network to be inferred, and its hyper-parameters are determined by cross validation. Then we formulate network inference as a matrix completion problem regularized by our degree prior. Our theoretical analysis indicates that this prior favors a network following the learned degree distribution, and may lead to improved network recovery error bound than previous work. Experimental results on both simulated and real biological networks demonstrate the superior performance of our method in various settings.


Interpretable Selection and Visualization of Features and Interactions Using Bayesian Forests

arXiv.org Machine Learning

It is becoming increasingly important for machine learning methods to make predictions that are interpretable as well as accurate. In many practical applications, it is of interest which features and feature interactions are relevant to the prediction task. We present a novel method, Selective Bayesian Forest Classifier, that strikes a balance between predictive power and interpretability by simultaneously performing classification, feature selection, feature interaction detection and visualization. It builds parsimonious yet flexible models using tree-structured Bayesian networks, and samples an ensemble of such models using Markov chain Monte Carlo. We build in feature selection by dividing the trees into two groups according to their relevance to the outcome of interest. Our method performs competitively on classification and feature selection benchmarks in low and high dimensions, and includes a visualization tool that provides insight into relevant features and interactions.


Feature Representation for ICU Mortality

arXiv.org Artificial Intelligence

Good predictors of ICU Mortality have the potential to identify high-risk patients earlier, improve ICU resource allocation, or create more accurate population-level risk models. Machine learning practitioners typically make choices about how to represent features in a particular model, but these choices are seldom evaluated quantitatively. This study compares the performance of different representations of clinical event data from MIMIC II in a logistic regression model to predict 36-hour ICU mortality. The most common representations are linear (normalized counts) and binary (yes/no). These, along with a new representation termed "hill", are compared using both L1 and L2 regularization. Results indicate that the introduced "hill" representation outperforms both the binary and linear representations, the hill representation thus has the potential to improve existing models of ICU mortality.