Connected Autonomous Vehicles (CAVs) promise to reduce congestion in future urban networks, potentially by optimizing their routing decisions. Unlike for human drivers, these decisions can be made with collective, data-driven policies, developed using machine learning algorithms. Reinforcement learning (RL) can facilitate the development of such collective routing strategies, yet standardized and realistic benchmarks are missing. To that end, we present URB: Urban Routing Benchmark for RL-equipped Connected Autonomous Vehicles. URB is a comprehensive benchmarking environment that unifies evaluation across 29 real-world traffic networks paired with realistic demand patterns. URB comes with a catalog of predefined tasks, multi-agent RL (MARL) algorithm implementations, three baseline methods, domain-specific performance metrics, and a modular configuration scheme. Our results show that, despite the lengthy and costly training, state-of-the-art MARL algorithms rarely outperformed humans. The experimental results reported in this paper initiate the first leaderboard for MARL in large-scale urban routing optimization. They reveal that current approaches struggle to scale, emphasizing the urgent need for advancements in this domain.

Spatio-temporal prediction plays a crucial role in intelligent transportation, weather forecasting, and urban planning. While integrating multi-modal data has shown potential for enhancing prediction accuracy, key challenges persist: (i) inadequate fusion of multi-modal information, (ii) confounding factors that obscure causal relations, and (iii) high computational complexity of prediction models. To address these challenges, we propose E^2-CSTP, an Effective and Efficient Causal multi-modal Spatio-Temporal Prediction framework. E^2-CSTP leverages cross-modal attention and gating mechanisms to effectively integrate multi-modal data. Building on this, we design a dual-branch causal inference approach: the primary branch focuses on spatio-temporal prediction, while the auxiliary branch mitigates bias by modeling additional modalities and applying causal interventions to uncover true causal dependencies. To improve model efficiency, we integrate GCN with the Mamba architecture for accelerated spatio-temporal encoding. Extensive experiments on 4 real-world datasets show that E^2-CSTP significantly outperforms 9 state-of-the-art methods, achieving up to 9.66% improvements in accuracy as well as 17.37%-56.11% reductions in computational overhead.

Large language models (LLMs) have revolutionized natural language processing and are increasingly applied to other sequential data types, including genetic sequences. However, adapting LLMs to genomics presents significant challenges. Capturing complex genomic interactions requires modeling long-range dependencies within DNA sequences, where interactions often span over 10,000 base pairs, even within a single gene, posing substantial computational burdens under conventional model architectures and training paradigms. Moreover, standard LLM training approaches are suboptimal for DNA: autoregressive training, while efficient, supports only unidirectional understanding. However, DNA is inherently bidirectional, e.g., bidirectional promoters regulate transcription in both directions and account for nearly 11% of human gene expression. Masked language models (MLMs) allow bidirectional understanding but are inefficient, as only masked tokens contribute to the loss per step. To address these limitations, we introduce JanusDNA, the first bidirectional DNA foundation model built upon a novel pretraining paradigm that combines the optimization efficiency of autoregressive modeling with the bidirectional comprehension of masked modeling. JanusDNA adopts a hybrid Mamba, Attention and Mixture of Experts (MoE) architecture, combining long-range modeling of Attention with efficient sequential learning of Mamba. MoE layers further scale model capacity via sparse activation while keeping computational cost low. Notably, JanusDNA processes up to 1 million base pairs at single nucleotide resolution on a single 80GB GPU. Extensive experiments and ablations show JanusDNA achieves new SOTA results on three genomic representation benchmarks, outperforming models with 250x more activated parameters. Code: https://github.com/Qihao-Duan/JanusDNA

The growing body of literature on training-data reconstruction attacks raises significant concerns about deploying neural network classifiers trained on sensitive data. However, differentially private (DP) training (e.g. using DP-SGD) can defend against such attacks with large training datasets causing only minimal loss of network utility. Folklore, heuristics, and (albeit pessimistic) DP bounds suggest this fails for networks trained with small per-class datasets, yet to the best of our knowledge the literature offers no compelling evidence. We directly demonstrate this vulnerability by significantly extending reconstruction attack capabilities under a realistic adversary threat model for few-shot transfer learned image classifiers. We design new white-box and black-box attacks and find that DP-SGD is unable to defend against these without significant classifier utility loss. To address this, we propose a novel homomorphic encryption (HE) method that protects training data without degrading model's accuracy. Conventional HE secures model's input data and requires costly homomorphic implementation of the entire classifier. In contrast, our new scheme is computationally efficient and protects training data rather than input data. This is achieved by means of a simple role-reversal where classifier input data is unencrypted but transfer-learned weights are encrypted. Classifier outputs remain encrypted, thus preventing both white-box and black-box (and any other) training-data reconstruction attacks. Under this new scheme only a trusted party with a private decryption key can obtain the classifier class decisions.

The increasing deployment of Large Vision-Language Models (LVLMs) raises safety concerns under potential malicious inputs. However, existing multimodal safety evaluations primarily focus on model vulnerabilities exposed by static image inputs, ignoring the temporal dynamics of video that may induce distinct safety risks. To bridge this gap, we introduce Video-SafetyBench, the first comprehensive benchmark designed to evaluate the safety of LVLMs under video-text attacks. It comprises 2,264 video-text pairs spanning 48 fine-grained unsafe categories, each pairing a synthesized video with either a harmful query, which contains explicit malice, or a benign query, which appears harmless but triggers harmful behavior when interpreted alongside the video. To generate semantically accurate videos for safety evaluation, we design a controllable pipeline that decomposes video semantics into subject images (what is shown) and motion text (how it moves), which jointly guide the synthesis of query-relevant videos. To effectively evaluate uncertain or borderline harmful outputs, we propose RJScore, a novel LLM-based metric that incorporates the confidence of judge models and human-aligned decision threshold calibration. Extensive experiments show that benign-query video composition achieves average attack success rates of 67.2%, revealing consistent vulnerabilities to video-induced attacks. We believe Video-SafetyBench will catalyze future research into video-based safety evaluation and defense strategies.

A well-known issue with Retrieval Augmented Generation (RAG) is that retrieved passages that are irrelevant to the query sometimes distract the answer-generating LLM, causing it to provide an incorrect response. In this paper, we shed light on this core issue and formulate the distracting effect of a passage w.r.t. a query (and an LLM). We provide a quantifiable measure of the distracting effect of a passage and demonstrate its robustness across LLMs. Our research introduces novel methods for identifying and using hard distracting passages to improve RAG systems. By fine-tuning LLMs with these carefully selected distracting passages, we achieve up to a 7.5% increase in answering accuracy compared to counterparts fine-tuned on conventional RAG datasets. Our contribution is two-fold: first, we move beyond the simple binary classification of irrelevant passages as either completely unrelated vs. distracting, and second, we develop and analyze multiple methods for finding hard distracting passages. To our knowledge, no other research has provided such a comprehensive framework for identifying and utilizing hard distracting passages.

This study estimates cognitive effort based on functional near-infrared spectroscopy data and performance scores using a hybrid DeepNet model. The estimation of cognitive effort enables educators to modify material to enhance learning effectiveness and student engagement. In this study, we collected oxygenated hemoglobin using functional near-infrared spectroscopy during an educational quiz game. Participants (n=16) responded to 16 questions in a Unity-based educational game, each within a 30-second response time limit. We used DeepNet models to predict the performance score from the oxygenated hemoglobin, and compared traditional machine learning and DeepNet models to determine which approach provides better accuracy in predicting performance scores. The result shows that the proposed CNN-GRU gives better performance with 73% than other models. After the prediction, we used the predicted score and the oxygenated hemoglobin to observe cognitive effort by calculating relative neural efficiency and involvement in our test cases. Our result shows that even with moderate accuracy, the predicted cognitive effort closely follow the actual trends. This findings can be helpful in designing and improving learning environments and provide valuable insights into learning materials.

Scientific knowledge is growing rapidly, making it difficult to track progress and high-level conceptual links across broad disciplines. While tools like citation networks and search engines help retrieve related papers, they lack the abstraction needed to capture the needed to represent the density and structure of activity across subfields. We motivate SCIENCE HIERARCHOGRAPHY, the goal of organizing scientific literature into a high-quality hierarchical structure that spans multiple levels of abstraction -- from broad domains to specific studies. Such a representation can provide insights into which fields are well-explored and which are under-explored. To achieve this goal, we develop a hybrid approach that combines efficient embedding-based clustering with LLM-based prompting, striking a balance between scalability and semantic precision. Compared to LLM-heavy methods like iterative tree construction, our approach achieves superior quality-speed trade-offs. Our hierarchies capture different dimensions of research contributions, reflecting the interdisciplinary and multifaceted nature of modern science. We evaluate its utility by measuring how effectively an LLM-based agent can navigate the hierarchy to locate target papers. Results show that our method improves interpretability and offers an alternative pathway for exploring scientific literature beyond traditional search methods. Code, data and demo are available: https://github.com/JHU-CLSP/science-hierarchography

Reducing undesirable path crossings among trajectories of different robots is vital in multi-robot navigation missions, which not only reduces detours and conflict scenarios, but also enhances navigation efficiency and boosts productivity. Despite recent progress in multi-robot path-crossing-minimal (MPCM) navigation, the majority of approaches depend on the minimal squared-distance reassignment of suitable desired points to robots directly. However, if obstacles occupy the passing space, calculating the actual robot-point distances becomes complex or intractable, which may render the MPCM navigation in obstacle environments inefficient or even infeasible. In this paper, the concurrent-allocation task execution (CATE) algorithm is presented to address this problem (i.e., MPCM navigation in obstacle environments). First, the path-crossing-related elements in terms of (i) robot allocation, (ii) desired-point convergence, and (iii) collision and obstacle avoidance are encoded into integer and control barrier function (CBF) constraints. Then, the proposed constraints are used in an online constrained optimization framework, which implicitly yet effectively minimizes the possible path crossings and trajectory length in obstacle environments by minimizing the desired point allocation cost and slack variables in CBF constraints simultaneously. In this way, the MPCM navigation in obstacle environments can be achieved with flexible spatial orderings. Note that the feasibility of solutions and the asymptotic convergence property of the proposed CATE algorithm in obstacle environments are both guaranteed, and the calculation burden is also reduced by concurrently calculating the optimal allocation and the control input directly without the path planning process.

Deep learning techniques have driven significant progress in various analytical tasks within 3D genomics in computational biology. However, a holistic understanding of 3D genomics knowledge remains underexplored. Here, we propose MIX-HIC, the first multimodal foundation model of 3D genome that integrates both 3D genome structure and epigenomic tracks, which obtains unified and comprehensive semantics. For accurate heterogeneous semantic fusion, we design the cross-modal interaction and mapping blocks for robust unified representation, yielding the accurate aggregation of 3D genome knowledge. Besides, we introduce the first large-scale dataset comprising over 1 million pairwise samples of Hi-C contact maps and epigenomic tracks for high-quality pre-training, enabling the exploration of functional implications in 3D genomics. Extensive experiments show that MIX-HIC can significantly surpass existing state-of-the-art methods in diverse downstream tasks. This work provides a valuable resource for advancing 3D genomics research.