Autism
BrainEC-LLM: Brain Effective Connectivity Estimation via Multiscale Mixing LLM
Pre-trained Large language models (LLMs) have shown impressive advancements in functional magnetic resonance imaging (fMRI) analysis and causal discovery. Considering the unique nature of the causal discovery field, which focuses on extracting causal graphs from observed data, research on LLMs in this field is still at an early exploratory stage. As a subfield of causal discovery, effective connectivity (EC) has received even less attention, and LLM-based approaches in EC remain unexplored. Existing LLM-based approaches for causal discovery typically rely on iterative querying to assess the causal influence between variable pairs, without any model adaptation or fine-tuning, making them ill-suited for handling the cross-modal gap and complex causal structures. To this end, we propose BrainECLLM, the first method to fine-tune LLMs for estimating brain EC from fMRI data. Specifically, multiscale decomposition mixing module decomposes fMRI time series data into short-term and long-term multiscale trends, then mixing them in bottom-up (fine to coarse) and top-down (coarse to fine) manner to extract multiscale temporal variations. And cross attention is applied with pre-trained word embeddings to ensure consistency between the fMRI input and pre-trained natural language. The experimental results on simulated and real resting-state fMRI datasets demonstrate that BrainEC-LLM can achieve superior performance when compared to state-of-the-art baselines. The code is available at https: //github.com/XiongWenXww/BrainEC-LLM.
Autism and ADHD are on the rise due to widening diagnostic criteria
A study of 140,000 people suggests that a broadening of the diagnostic criteria for autism and ADHD explains the sharp rise in diagnoses, but that doesn't mean too many people are being told they are autistic or have ADHD We may be beginning to understand what is behind the recent explosion in diagnoses of ADHD and autism . A study of 140,000 people in Denmark reveals that those recently diagnosed with ADHD or autism have fewer genetic variations associated with them than people diagnosed a decade earlier. This suggests that a broadening of the diagnostic criteria is behind the rise, but it doesn't support claims that ADHD and autism are being overdiagnosed. Diagnoses for autism and ADHD have risen up to tenfold around the world over the past two decades, particularly among girls and adults. Several possibilities have been put forward to explain this, including better awareness and understanding, a broadening of the diagnostic criteria, and even the commercial interests of pharmaceutical companies and private diagnostic clinics.
BrainMoE Cognition Joint Embedding via Mixture of Expert Towards Robust Brain Foundation Model
Given the large scale of public functional Magnetic Resonance Imaging (fMRI), e.g., UKBiobank (UKB) and Human Connectome Projects (HCP), brain foundation models are emerging. Although the amount of samples under rich environmental variables is unprecedented, existing brain foundation models learn from fMRI derived from a narrow range of cognitive states stimulated by similar environments, causing the limited robustness demonstrated in various applications and datasets acquired with different pipelines and limited sample size. By capitalizing on the variety of cognitive status as subjects performing explicit tasks, we present the mixture of brain experts, namely BrainMoE, pre-training on tasking fMRI with rich behavioral tasks in addition to resting fMRI for a robust brain foundation model. Brain experts are designed to produce embeddings for different behavioral tasks related to cognition. Afterward, these cognition embeddings are mixed by a cognition adapter via cross-attention so that BrainMoE can handle orthogonal embeddings and be robust on those boutique downstream datasets. We have pre-trained two existing self-regressive architectures and one new supervised architecture as brain experts on 68,251 fMRI scans among UKB and HCP, containing 12 different cognitive states. Then, BrainMoE is evaluated on a variety of applications, including sex, age prediction, human behavior recognition, disease early diagnosis of Autism, Parkinson's disease, Alzheimer's disease, and Schizophrenia, and fMRI-EEG multimodal applications, where promising results in eight datasets from three different pipelines indicate great potential to facilitate current neuroimaging applications in clinical routines.
The challenge of being neurodivergent in Japan's culture of conformity
As awareness grows, more Japanese adults are receiving answers to struggles that went unrecognized for years. Social camouflaging can help neurodivergent people navigate social situations, but researchers say the effort often comes with significant emotional and mental strain. The first major crisis in Yosuke's life came when he stood in front of his students. Until then, the 24-year-old had navigated his life with few obstacles. He had done well in school, scored highly on IQ tests and graduated from university without any major issues. But after securing his dream job as a geography and history teacher at a girls' high school two years ago, cracks began to show. "I couldn't read the room," says Yosuke, who recalls struggling to organize course materials and wrap up classes on time.
BrainMoE: Cognition Joint Embedding via Mixture-of-Expert Towards Robust Brain Foundation Model
Given the large scale of public functional Magnetic Resonance Imaging (fMRI), e.g., UK Biobank (UKB) and Human Connectome Projects (HCP), brain foundation models are emerging. Although the amount of samples under rich environmental variables is unprecedented, existing brain foundation models learn from fMRI derived from a narrow range of cognitive states stimulated by similar environments, causing the limited robustness demonstrated in various applications and datasets acquired with different pipelines and limited sample size. By capitalizing on the variety of cognitive status as subjects performing explicit tasks, we present the mixture of brain experts, namely BrainMoE, pre-training on tasking fMRI with rich behavioral tasks in addition to resting fMRI for a robust brain foundation model. Brain experts are designed to produce embeddings for different behavioral tasks related to cognition. Afterward, these cognition embeddings are mixed by a cognition adapter via cross-attention so that BrainMoE can handle orthogonal embeddings and be robust on those boutique downstream datasets. We have pre-trained two existing self-regressive architectures and one new supervised architecture as brain experts on 68,251 fMRI scans among UKB and HCP, containing 12 different cognitive states. Then, BrainMoE is evaluated on a variety of applications, including sex, age prediction, human behavior recognition, disease early diagnosis of Autism, Parkinson's disease, Alzheimer's disease, and Schizophrenia, and fMRI-EEG multimodal applications, where promising results in eight datasets from three different pipelines indicate great potential to facilitate current neuroimaging applications in clinical routines.
Why autism pioneer Uta Frith wants to dismantle the spectrum
Uta Frith seems remarkably cheerful and content for someone who's spent six decades trying and failing to get to grips with her life's obsession. "Very little has stood the test of time," she tells me as we sit down in her living room in a leafy estate in Harrow-on-the-Hill, London. Around us, high-ceilinged walls papered in a luxurious red print are barely visible between rammed bookshelves, several model brains and a collection of abstract art. Frith has been searching for the mechanisms that underpin the enigmatic condition of autism ever since she first met profoundly autistic children in the late 1960s. "We could identify them intuitively, but not really scientifically - and I have to say that this is, unfortunately, still the case." Still, Frith's influence on our ever-shifting understanding of autism has been monumental.
Learning to Learn Graph Topologies
Learning a graph topology to reveal the underlying relationship between data entities plays an important role in various machine learning and data analysis tasks. Under the assumption that structured data vary smoothly over a graph, the problem can be formulated as a regularised convex optimisation over a positive semidefinite cone and solved by iterative algorithms. Classic methods require an explicit convex function to reflect generic topological priors, e.g. the `1 penalty for enforcing sparsity, which limits the flexibility and expressiveness in learning rich topological structures. We propose to learn a mapping from node data to the graph structure based on the idea of learning to optimise (L2O). Specifically, our model first unrolls an iterative primal-dual splitting algorithm into a neural network. The key structural proximal projection is replaced with a variational autoencoder that refines the estimated graph with enhanced topological properties. The model is trained in an end-to-end fashion with pairs of node data and graph samples. Experiments on both synthetic and real-world data demonstrate that our model is more efficient than classic iterative algorithms in learning a graph with specific topological properties.
Hassan Took a Bike Ride. Now He's One of the Thousands Missing in Gaza
In a place denied access to basic forensic technology--and where people disappear into Israeli detention--the fate of thousands remains unknown. One of them is an autistic teenager. In the early morning dark, Abeer Skaik turned to her husband, Ali Al-Qatta, and said that today would be the day they would find their son. Ali nodded in silence, and she handed him the stack of flyers. Each bore a photograph of 16-year-old Hassan smiling widely, his shoulders loose, wearing a plain red T-shirt. He is looking directly at the camera, unguarded. On top of the page, in large letters, Abeer had written a single word in bold red ink: --an appeal. Abeer watched as Ali stepped into a car with a few close friends and drove away. They started the 30-kilometer trip south, from al-Tuffah, east of Gaza City, to the European Hospital in Khan Younis. They had heard that a group of people detained by Israel, including children, would be released there. The gate was already crowded. Families stood shoulder to shoulder, wrapped in blankets against the cold, clutching photographs and ID cards. Ali distributed the flyers among his friends. When the buses of released detainees arrived, he and the others moved slowly through the narrow gaps between clusters of people. Some of those who had just been released were being pulled into embraces. Ali waited at the edge of each reunion. "Have you seen my son?" he asked. One after another, people shook their heads.
Extracting Relationships by Multi-Domain Matching
In many biological and medical contexts, we construct a large labeled corpus by aggregating many sources to use in target prediction tasks. Unfortunately, many of the sources may be irrelevant to our target task, so ignoring the structure of the dataset is detrimental. This work proposes a novel approach, the Multiple Domain Matching Network (MDMN), to exploit this structure. MDMN embeds all data into a shared feature space while learning which domains share strong statistical relationships. These relationships are often insightful in their own right, and they allow domains to share strength without interference from irrelevant data. This methodology builds on existing distribution-matching approaches by assuming that source domains are varied and outcomes multi-factorial. Therefore, each domain should only match a relevant subset. Theoretical analysis shows that the proposed approach can have a tighter generalization bound than existing multiple-domain adaptation approaches. Empirically, we show that the proposed methodology handles higher numbers of source domains (up to 21 empirically), and provides state-of-the-art performance on image, text, and multi-channel time series classification, including clinically relevant data of a novel treatment of Autism Spectrum Disorder.