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Interview with AAAI Fellow Tanya Berger-Wolf: AI for ecology, biodiversity, and conservation

AIHub

Each year the AAAI recognizes a group of individuals who have made significant, sustained contributions to the field of artificial intelligence by appointing them as Fellows. Over the course of the next few months, we'll be talking to some of the 2026 AAAI Fellows. In this interview, we met with Tanya Berger-Wolf, who was elected as a Fellow . We found out about her latest research developing a foundation model for biology, the insights this model can provide, interesting collaborations over the years, and what the future has in store. Could you start with a quick introduction and tell us about the broad area that you're working in? My area of research is in AI for ecology, biodiversity, and conservation.


Hyperbolic Fine-Tuning for Large Language Models

Neural Information Processing Systems

Large language models (LLMs) have demonstrated remarkable performance across various tasks. However, it remains an open question whether the default Euclidean space is the most suitable choice for LLMs. In this study, we investigate the geometric characteristics of LLMs, focusing specifically on tokens and their embeddings. Our findings reveal that token frequency follows a power-law distribution, where high-frequency tokens (e.g., the, that) constitute the minority, while low-frequency tokens (e.g., apple, dog) constitute the majority. Furthermore, high-frequency tokens cluster near the origin, whereas low-frequency tokens are positioned farther away in the embedding space.


Fire360: A Benchmark for Robust Perception and Episodic Memory in Degraded 360 Firefighting Video

Neural Information Processing Systems

Modern AI systems struggle most in environments where reliability is critical - scenes with smoke, poor visibility, and structural deformation. Each year, tens of thousands of firefighters are injured on duty, often due to breakdowns in situational perception. We introduce Fire360, a benchmark for evaluating perception and reasoning in safety-critical firefighting scenarios. The dataset includes 228 360 videos from professional training sessions under diverse conditions (e.g., low light, thermal distortion), annotated with action segments, object locations, and degradation metadata. Fire360 supports five tasks: Visual Question Answering, Temporal Action Captioning, Object Localization, Safety-Critical Reasoning, and Transformed Object Retrieval (TOR). TOR tests whether models can match pristine exemplars to fire-damaged counterparts in unpaired scenes, evaluating episodic memory under irreversible visual transformations. While human experts achieve 83.5% on TOR, models like GPT-4o lag significantly, exposing failures in reasoning under degradation. By releasing Fire360 and its evaluation suite, we aim to advance models that not only see, but also remember, reason, and act under uncertainty.


SynBrain: Enhancing Visual-to-fMRI Synthesis via Probabilistic Representation Learning

Neural Information Processing Systems

Deciphering how visual stimuli are transformed into cortical responses is a fundamental challenge in computational neuroscience. This visual-to-neural mapping is inherently a one-to-many relationship, as identical visual inputs reliably evoke variable hemodynamic responses across trials, contexts, and subjects. However, existing deterministic methods struggle to simultaneously model this biological variability while capturing the underlying functional consistency that encodes stimulus information. To address these limitations, we propose SynBrain, a generative framework that simulates the transformation from visual semantics to neural responses in a probabilistic and biologically interpretable manner. SynBrain introduces two key components: (i) BrainVAE models neural representations as continuous probability distributions via probabilistic learning while maintaining functional consistency through visual semantic constraints; (ii) A Semantic-to-Neural Mapper acts as a semantic transmission pathway, projecting visual semantics into the neural response manifold to facilitate high-fidelity fMRI synthesis. Experimental results demonstrate that SynBrain surpasses state-of-the-art methods in subject-specific visual-to-fMRI encoding performance. Furthermore, SynBrain adapts efficiently to new subjects with few-shot data and synthesizes high-quality fMRI signals that are effective in improving data-limited fMRI-to-image decoding performance. Beyond that, SynBrain reveals functional consistency across trials and subjects, with synthesized signals capturing interpretable patterns shaped by biological neural variability.


ChunkKV: Semantic-Preserving KV Cache Compression for Efficient Long-Context LLM Inference

Neural Information Processing Systems

Large Language Models (LLMs) require significant GPU memory when processing long texts, with the key value (KV) cache consuming up to 70\% of total memory during inference. Although existing compression methods reduce memory by evaluating the importance of individual tokens, they overlook critical semantic relationships between tokens, resulting in fragmented context and degraded performance. We introduce \method{}, which fundamentally reimagines KV cache compression by treating semantic chunks - rather than isolated tokens - as basic compression units. This approach preserves complete linguistic structures and contextual integrity, ensuring that essential meaning is retained even under aggressive compression. Our innovation includes a novel layer-wise index reuse technique that exploits the higher cross-layer similarity of preserved indices in \method{}, reducing computational overhead and improving throughput by 26.5\%. Comprehensive evaluations on challenging benchmarks: LongBench, Needle-In-A-HayStack, GSM8K, and JailbreakV demonstrate that \method{} outperforms state-of-the-art methods by up to 8.7\% in precision while maintaining the same compression ratio. These results confirm that semantic-aware compression significantly enhances both efficiency and performance for long-context LLM inference, providing a simple yet effective solution to the memory bottleneck problem.


Spike4DGS: Towards High-Speed Dynamic Scene Rendering with 4D Gaussian Splatting via a Spike Camera Array

Neural Information Processing Systems

Spike camera with high temporal resolution offers a new perspective on high-speed dynamic scene rendering. Most existing rendering methods rely on Neural Radiance Fields (NeRF) or 3D Gaussian Splatting (3DGS) for static scenes using a monocular spike camera. However, these methods struggle with dynamic motion, while a single camera suffers from limited spatial coverage, making it challenging to reconstruct fine details in high-speed scenes. To address these problems, we propose Spike4DGS, the first high-speed dynamic scene rendering framework with 4D Gaussian Splatting using spike camera arrays. Technically, we first build a multi-view spike camera array to validate our solution, then establish both synthetic and real-world multi-view spike-based reconstruction datasets. Then, we design a multi-view spike-based dense initialization module that obtains dense point clouds and camera poses from continuous spike streams. Finally, we propose a spike-pixel synergy constraint supervision to optimize Spike4DGS, incorporating both rendered image quality loss and dynamic spatiotemporal spike loss. The results show that our Spike4DGS outperforms state-of-the-art methods in terms of novel view rendering quality on both synthetic and real-world datasets.


Semantic-KG: Using Knowledge Graphs to Construct Benchmarks for Measuring Semantic Similarity

Neural Information Processing Systems

Evaluating the open-form textual responses generated by Large Language Models (LLMs) typically requires measuring the semantic similarity of the response to a (human generated) reference. However, there is evidence that current semantic similarity methods may capture syntactic or lexical forms over semantic content. While benchmarks exist for semantic equivalence, they often suffer from high generation costs due to reliance on subjective human judgment, limited availability for domain-specific applications, and unclear definitions of equivalence. This paper introduces a novel method for generating benchmarks to evaluate semantic similarity methods for LLM outputs, specifically addressing these limitations. Our approach leverages knowledge graphs (KGs) to generate pairs of natural-language statements that are semantically similar or dissimilar, with dissimilar pairs categorized into one of four sub-types. We generate benchmark datasets in four different domains (general knowledge, biomedicine, finance, biology), and conduct a comparative study of semantic similarity methods including traditional natural language processing scores and LLM-as-a-judge predictions. We observe that the sub-type of semantic variation, as well as the domain of the benchmark impact the performance of semantic similarity methods, with no method being consistently superior.


Bandit and Delayed Feedback in Online Structured Prediction

Neural Information Processing Systems

Online structured prediction is a task of sequentially predicting outputs with complex structures based on inputs and past observations, encompassing online classification. Recent studies showed that in the full-information setting, we can achieve finite bounds on the *surrogate regret*, *i.e.,* the extra target loss relative to the best possible surrogate loss. In practice, however, full-information feedback is often unrealistic as it requires immediate access to the whole structure of complex outputs. Motivated by this, we propose algorithms that work with less demanding feedback, *bandit* and *delayed* feedback. For bandit feedback, by using a standard inverse-weighted gradient estimator, we achieve a surrogate regret bound of $O(\sqrt{KT})$ for the time horizon $T$ and the size of the output set $K$. However, $K$ can be extremely large when outputs are highly complex, resulting in an undesirable bound.


VideoLucy: Deep Memory Backtracking for Long Video Understanding

Neural Information Processing Systems

Recent studies have shown that agent-based systems leveraging large language models (LLMs) for key information retrieval and integration have emerged as a promising approach for long video understanding. However, these systems face two major challenges. First, they typically perform modeling and reasoning on individual frames, struggling to capture the temporal context of consecutive frames. Second, to reduce the cost of dense frame-level captioning, they adopt sparse frame sampling, which risks discarding crucial information. To overcome these limitations, we propose VideoLucy, a deep memory backtracking framework for long video understanding.


HARDMath2: A Benchmark for Applied Mathematics Built by Students as Part of a Graduate Class

Neural Information Processing Systems

Large language models (LLMs) have shown remarkable progress in mathematical problem-solving, but evaluation has largely focused on problems that have exact analytical solutions or involve formal proofs, often overlooking approximation-based problems ubiquitous in applied science and engineering. To fill this gap, we build on prior work and present $\textbf{HARDMath2}$, a dataset of 211 original problems covering the core topics in an introductory graduate applied math class, including boundary-layer analysis, WKB methods, asymptotic solutions of nonlinear partial differential equations, and the asymptotics of oscillatory integrals. This dataset was designed and verified by the students and instructors of a core graduate applied mathematics course at Harvard. We build the dataset through a novel collaborative environment that challenges students to write and refine difficult problems consistent with the class syllabus, peer-validate solutions, test different models, and automatically check LLM-generated solutions against their own answers and numerical ground truths. Evaluation results show that leading frontier models still struggle with many of the problems in the dataset, highlighting a gap in the mathematical reasoning skills of current LLMs. Importantly, students identified strategies to create increasingly difficult problems by interacting with the models and exploiting common failure modes. This back-and-forth with the models not only resulted in a richer and more challenging benchmark but also led to qualitative improvements in the students' understanding of the course material, which is increasingly important as we enter an age where state-of-the-art language models can solve many challenging problems across a wide domain of fields.