Genre
Artificial Intelligence to help Diagnose Alzheimer's disease
NETHERLANDS -Machine learning is a type of artificial intelligence that allows computer programs to learn things when exposed to new data, without being reprogrammed. Now, researchers have matched machine learning methods with a special technique of magnetic resonance imaging (MRI) that measures blood perfusion (absorption rate of this tissue) throughout the brain to detect early forms of dementia. MRI can help diagnose Alzheimer's disease. However, early diagnosis is difficult. Scientists have long known that Alzheimer's disease is a gradual process and that the brain undergoes functional changes before the structural changes associated with the disease visually displayed on the test results.
Machine learning could help revolutionize early Alzheimer's diagnosis
Alzheimer's is a devastating chronic neurodegenerative disease that currently affects about 5.4 million people in the U.S. alone. Alzheimer's patients suffer progressive mental deterioration, which eventually impairs even basic bodily functions like walking and swallowing. While Alzheimer's can increasingly be managed, one of the big challenges of the disease is early diagnosis. MRI machines can be used to confirm advanced cases, but by the time the disease has reached this stage, brain tissue is gone and there is no way to restore it. Could machine-learning tools be used to help detect and identify Alzheimer's disease before it is currently possible to do so?
Machine learning startup Dato changes name to Turi after trademark battle
Seattle-based machine learning startup Dato, which originally launched as GraphLab, announced today that it has changed its name again. Now, the company is known as Turi, an ode to computer science legend Alan Turing. This past September, Turi -- then Dato -- found itself in a trademark infringement argument with fellow tech startup Datto after Dato changed its name from GraphLab in January 2015. Datto, which has been offering data backup and recovery services from its Connecticut headquarters since 2007, first complained about Dato's new name just weeks after the company finished its rebranding from GraphLab. Datto argued that Dato's new name would cause confusion.
Document Clustering Games in Static and Dynamic Scenarios
Tripodi, Rocco, Pelillo, Marcello
In this work we propose a game theoretic model for document clustering. Each document to be clustered is represented as a player and each cluster as a strategy. The players receive a reward interacting with other players that they try to maximize choosing their best strategies. The geometry of the data is modeled with a weighted graph that encodes the pairwise similarity among documents, so that similar players are constrained to choose similar strategies, updating their strategy preferences at each iteration of the games. We used different approaches to find the prototypical elements of the clusters and with this information we divided the players into two disjoint sets, one collecting players with a definite strategy and the other one collecting players that try to learn from others the correct strategy to play. The latter set of players can be considered as new data points that have to be clustered according to previous information. This representation is useful in scenarios in which the data are streamed continuously. The evaluation of the system was conducted on 13 document datasets using different settings. It shows that the proposed method performs well compared to different document clustering algorithms.
Pseudo-Marginal Hamiltonian Monte Carlo
Lindsten, Fredrik, Doucet, Arnaud
Bayesian inference in the presence of an intractable likelihood function is computationally challenging. When following a Markov chain Monte Carlo (MCMC) approach to approximate the posterior distribution in this context, one typically either uses MCMC schemes which target the joint posterior of the parameters and some auxiliary latent variables or pseudo-marginal Metropolis-Hastings (MH) schemes which mimic a MH algorithm targeting the marginal posterior of the parameters by approximating unbiasedly the intractable likelihood. In scenarios where the parameters and auxiliary variables are strongly correlated under the posterior and/or this posterior is multimodal, Gibbs sampling or Hamiltonian Monte Carlo (HMC) will perform poorly and the pseudo-marginal MH algorithm, as any other MH scheme, will be inefficient for high dimensional parameters. We propose here an original MCMC algorithm, termed pseudo-marginal HMC, which approximates the HMC algorithm targeting the marginal posterior of the parameters. We demonstrate through experiments that pseudo-marginal HMC can outperform significantly both standard HMC and pseudo-marginal MH schemes.
Convergence rates of Kernel Conjugate Gradient for random design regression
Blanchard, Gilles, Krรคmer, Nicole
We prove statistical rates of convergence for kernel-based least squares regression from i.i.d. data using a conjugate gradient algorithm, where regularization against overfitting is obtained by early stopping. This method is related to Kernel Partial Least Squares, a regression method that combines supervised dimensionality reduction with least squares projection. Following the setting introduced in earlier related literature, we study so-called "fast convergence rates" depending on the regularity of the target regression function (measured by a source condition in terms of the kernel integral operator) and on the effective dimensionality of the data mapped into the kernel space. We obtain upper bounds, essentially matching known minimax lower bounds, for the $\mathcal{L}^2$ (prediction) norm as well as for the stronger Hilbert norm, if the true regression function belongs to the reproducing kernel Hilbert space. If the latter assumption is not fulfilled, we obtain similar convergence rates for appropriate norms, provided additional unlabeled data are available.
On the Difficulty of Selecting Ising Models with Approximate Recovery
Scarlett, Jonathan, Cevher, Volkan
In this paper, we consider the problem of estimating the underlying graph associated with an Ising model given a number of independent and identically distributed samples. We adopt an \emph{approximate recovery} criterion that allows for a number of missed edges or incorrectly-included edges, in contrast with the widely-studied exact recovery problem. Our main results provide information-theoretic lower bounds on the sample complexity for graph classes imposing constraints on the number of edges, maximal degree, and other properties. We identify a broad range of scenarios where, either up to constant factors or logarithmic factors, our lower bounds match the best known lower bounds for the exact recovery criterion, several of which are known to be tight or near-tight. Hence, in these cases, approximate recovery has a similar difficulty to exact recovery in the minimax sense. Our bounds are obtained via a modification of Fano's inequality for handling the approximate recovery criterion, along with suitably-designed ensembles of graphs that can broadly be classed into two categories: (i) Those containing graphs that contain several isolated edges or cliques and are thus difficult to distinguish from the empty graph; (ii) Those containing graphs for which certain groups of nodes are highly correlated, thus making it difficult to determine precisely which edges connect them. We support our theoretical results on these ensembles with numerical experiments.
Avoiding pathologies in very deep networks
Duvenaud, David, Rippel, Oren, Adams, Ryan P., Ghahramani, Zoubin
Choosing appropriate architectures and regularization strategies of deep networks is crucial to good predictive performance. To shed light on this problem, we analyze the analogous problem of constructing useful priors on compositions of functions. Specifically, we study the deep Gaussian process, a type of infinitely-wide, deep neural network. We show that in standard architectures, the representational capacity of the network tends to capture fewer degrees of freedom as the number of layers increases, retaining only a single degree of freedom in the limit. We propose an alternate network architecture which does not suffer from this pathology. We also examine deep covariance functions, obtained by composing infinitely many feature transforms. Lastly, we characterize the class of models obtained by performing dropout on Gaussian processes. In this paper, we propose to study the problem of choosing neural net architectures by viewing deep neural networks as priors on functions. By viewing neural networks this way, one can analyze their properties without reference to any particular dataset, loss function, or training method.
Bitly
This is the third in a series of posts on how to build a Data Science Portfolio. If you like this and want to know when the next post in the series is released, you can subscribe at the bottom of the page. Data science companies are increasingly looking at portfolios when making hiring decisions. One of the reasons for this is that a portfolio is the best way to judge someone's real-world skills. The good news for you is that a portfolio is entirely within your control. If you put some work in, you can make a great portfolio that companies are impressed by. The first step in making a high-quality portfolio is to know what skills to demonstrate. Any good portfolio will be composed of multiple projects, each of which may demonstrate 1-2 of the above points. This is the third post in a series that will cover how to make a well-rounded data science portfolio.