Genre
Mosquito Detection with Neural Networks: The Buzz of Deep Learning
Kiskin, Ivan, Orozco, Bernardo Pérez, Windebank, Theo, Zilli, Davide, Sinka, Marianne, Willis, Kathy, Roberts, Stephen
Many real-world time-series analysis problems are characterised by scarce data. Solutions typically rely on hand-crafted features extracted from the time or frequency domain allied with classification or regression engines which condition on this (often low-dimensional) feature vector. The huge advances enjoyed by many application domains in recent years have been fuelled by the use of deep learning architectures trained on large data sets. This paper presents an application of deep learning for acoustic event detection in a challenging, data-scarce, real-world problem. Our candidate challenge is to accurately detect the presence of a mosquito from its acoustic signature. We develop convolutional neural networks (CNNs) operating on wavelet transformations of audio recordings. Furthermore, we interrogate the network's predictive power by visualising statistics of network-excitatory samples. These visualisations offer a deep insight into the relative informativeness of components in the detection problem. We include comparisons with conventional classifiers, conditioned on both hand-tuned and generic features, to stress the strength of automatic deep feature learning. Detection is achieved with performance metrics significantly surpassing those of existing algorithmic methods, as well as marginally exceeding those attained by individual human experts.
The power of deeper networks for expressing natural functions
It is well-known that neural networks are universal approximators, but that deeper networks tend to be much more efficient than shallow ones. We shed light on this by proving that the total number of neurons $m$ required to approximate natural classes of multivariate polynomials of $n$ variables grows only linearly with $n$ for deep neural networks, but grows exponentially when merely a single hidden layer is allowed. We also provide evidence that when the number of hidden layers is increased from $1$ to $k$, the neuron requirement grows exponentially not with $n$ but with $n^{1/k}$, suggesting that the minimum number of layers required for computational tractability grows only logarithmically with $n$.
A statistical physics approach to learning curves for the Inverse Ising problem
Bachschmid-Romano, Ludovica, Opper, Manfred
Using methods of statistical physics, we analyse the error of learning couplings in large Ising models from independent data (the inverse Ising problem). We concentrate on learning based on local cost functions, such as the pseudo-likelihood method for which the couplings are inferred independently for each spin. Assuming that the data are generated from a true Ising model, we compute the reconstruction error of the couplings using a combination of the replica method with the cavity approach for densely connected systems. We show that an explicit estimator based on a quadratic cost function achieves minimal reconstruction error, but requires the length of the true coupling vector as prior knowledge. A simple mean field estimator of the couplings which does not need such knowledge is asymptotically optimal, i.e. when the number of observations is much large than the number of spins. Comparison of the theory with numerical simulations shows excellent agreement for data generated from two models with random couplings in the high temperature region: a model with independent couplings (Sherrington-Kirkpatrick model), and a model where the matrix of couplings has a Wishart distribution.
ShortFuse: Biomedical Time Series Representations in the Presence of Structured Information
Fiterau, Madalina, Bhooshan, Suvrat, Fries, Jason, Bournhonesque, Charles, Hicks, Jennifer, Halilaj, Eni, Ré, Christopher, Delp, Scott
In healthcare applications, temporal variables that encode movement, health status and longitudinal patient evolution are often accompanied by rich structured information such as demographics, diagnostics and medical exam data. However, current methods do not jointly optimize over structured covariates and time series in the feature extraction process. We present ShortFuse, a method that boosts the accuracy of deep learning models for time series by explicitly modeling temporal interactions and dependencies with structured covariates. ShortFuse introduces hybrid convolutional and LSTM cells that incorporate the covariates via weights that are shared across the temporal domain. ShortFuse outperforms competing models by 3% on two biomedical applications, forecasting osteoarthritis-related cartilage degeneration and predicting surgical outcomes for cerebral palsy patients, matching or exceeding the accuracy of models that use features engineered by domain experts.
Probabilistic Matrix Factorization for Automated Machine Learning
Fusi, Nicolo, Elibol, Huseyn Melih
In order to achieve state-of-the-art performance, modern machine learning techniques require careful data pre-processing and hyperparameter tuning. Moreover, given the ever increasing number of machine learning models being developed, model selection is becoming increasingly important. Automating the selection and tuning of machine learning pipelines consisting of data pre-processing methods and machine learning models, has long been one of the goals of the machine learning community. In this paper, we tackle this meta-learning task by combining ideas from collaborative filtering and Bayesian optimization. Using probabilistic matrix factorization techniques and acquisition functions from Bayesian optimization, we exploit experiments performed in hundreds of different datasets to guide the exploration of the space of possible pipelines. In our experiments, we show that our approach quickly identifies high-performing pipelines across a wide range of datasets, significantly outperforming the current state-of-the-art.
A Bayesian Filtering Algorithm for Gaussian Mixture Models
Wills, Adrian G., Hendriks, Johannes, Renton, Christopher, Ninness, Brett
A Bayesian filtering algorithm is developed for a class of state-space systems that can be modelled via Gaussian mixtures. In general, the exact solution to this filtering problem involves an exponential growth in the number of mixture terms and this is handled here by utilising a Gaussian mixture reduction step after both the time and measurement updates. In addition, a square-root implementation of the unified algorithm is presented and this algorithm is profiled on several simulated systems. This includes the state estimation for two non-linear systems that are strictly outside the class considered in this paper.
Emotion in Reinforcement Learning Agents and Robots: A Survey
Moerland, Thomas M., Broekens, Joost, Jonker, Catholijn M.
This article provides the first survey of computational models of emotion in reinforcement learning (RL) agents. The survey focuses on agent/robot emotions, and mostly ignores human user emotions. Emotions are recognized as functional in decision-making by influencing motivation and action selection. Therefore, computational emotion models are usually grounded in the agent's decision making architecture, of which RL is an important subclass. Studying emotions in RL-based agents is useful for three research fields. For machine learning (ML) researchers, emotion models may improve learning efficiency. For the interactive ML and human-robot interaction (HRI) community, emotions can communicate state and enhance user investment. Lastly, it allows affective modelling (AM) researchers to investigate their emotion theories in a successful AI agent class. This survey provides background on emotion theory and RL. It systematically addresses 1) from what underlying dimensions (e.g., homeostasis, appraisal) emotions can be derived and how these can be modelled in RL-agents, 2) what types of emotions have been derived from these dimensions, and 3) how these emotions may either influence the learning efficiency of the agent or be useful as social signals. We also systematically compare evaluation criteria, and draw connections to important RL sub-domains like (intrinsic) motivation and model-based RL. In short, this survey provides both a practical overview for engineers wanting to implement emotions in their RL agents, and identifies challenges and directions for future emotion-RL research.
Semi-Supervised Learning via Sparse Label Propagation
Jung, Alexander, Hero, Alfred O. III, Mara, Alexandru, Jahromi, Saeed
This work proposes a novel method for semi-supervised learning from partially labeled massive network-structured datasets, i.e., big data over networks. We model the underlying hypothesis, which relates data points to labels, as a graph signal, defined over some graph (network) structure intrinsic to the dataset. Following the key principle of supervised learning, i.e., similar inputs yield similar outputs, we require the graph signals induced by labels to have small total variation. Accordingly, we formulate the problem of learning the labels of data points as a non-smooth convex optimization problem which amounts to balancing between the empirical loss, i.e., the discrepancy with some partially available label information, and the smoothness quantified by the total variation of the learned graph signal. We solve this optimization problem by appealing to a recently proposed preconditioned variant of the popular primal-dual method by Pock and Chambolle, which results in a sparse label propagation algorithm. This learning algorithm allows for a highly scalable implementation as message passing over the underlying data graph. By applying concepts of compressed sensing to the learning problem, we are also able to provide a transparent sufficient condition on the underlying network structure such that accurate learning of the labels is possible. We also present an implementation of the message passing formulation allows for a highly scalable implementation in big data frameworks.
Learning Probabilistic Programs Using Backpropagation
Probabilistic modeling enables combining domain knowledge with learning from data, thereby supporting learning from fewer training instances than purely data-driven methods. However, learning probabilistic models is difficult and has not achieved the level of performance of methods such as deep neural networks on many tasks. In this paper, we attempt to address this issue by presenting a method for learning the parameters of a probabilistic program using backpropagation. Our approach opens the possibility to building deep probabilistic programming models that are trained in a similar way to neural networks.
Active Learning for Graph Embedding
Cai, Hongyun, Zheng, Vincent W., Chang, Kevin Chen-Chuan
Graph embedding provides an efficient solution for graph analysis by converting the graph into a low-dimensional space which preserves the structure information. In contrast to the graph structure data, the i.i.d. node embedding can be processed efficiently in terms of both time and space. Current semi-supervised graph embedding algorithms assume the labelled nodes are given, which may not be always true in the real world. While manually label all training data is inapplicable, how to select the subset of training data to label so as to maximize the graph analysis task performance is of great importance. This motivates our proposed active graph embedding (AGE) framework, in which we design a general active learning query strategy for any semi-supervised graph embedding algorithm. AGE selects the most informative nodes as the training labelled nodes based on the graphical information (i.e., node centrality) as well as the learnt node embedding (i.e., node classification uncertainty and node embedding representativeness). Different query criteria are combined with the time-sensitive parameters which shift the focus from graph based query criteria to embedding based criteria as the learning progresses. Experiments have been conducted on three public data sets and the results verified the effectiveness of each component of our query strategy and the power of combining them using time-sensitive parameters. Our code is available online at: https://github.com/vwz/AGE.