Transformers have revolutionized nucleotide sequence analysis, yet capturing long-range dependencies remains challenging. Recent studies show that autoregressive transformers often exhibit Markovian behavior by relying on fixed-length context windows for next-token prediction. However, standard self-attention mechanisms are computationally inefficient for long sequences due to their quadratic complexity and do not explicitly enforce global transition consistency. We introduce CARMANIA (Context-Aware Regularization with Markovian Integration for Attention-Based Nucleotide Analysis), a self-supervised pretraining framework that augments next-token (NT) prediction with a transition-matrix (TM) loss. The TM loss aligns predicted token transitions with empirically derived ngram statistics from each input sequence, encouraging the model to capture higherorder dependencies beyond local context.

Reinforcement learning (RL) has garnered increasing attention in text-to-image (T2I) generation. However, most existing RL approaches are tailored to either diffusion models or autoregressive models, overlooking an important alternative: masked generative models. In this work, we propose Mask-GRPO, the first method to incorporate Group Relative Policy Optimization (GRPO)-based RL into this overlooked paradigm. Our core insight is to redefine the transition probability, which is different from current approaches, and formulate the unmasking process as a multi-step decision-making problem. To further enhance our method, we explore several useful strategies, including removing the Kullback-Leibler constraint, applying the reduction strategy, and filtering out low-quality samples. Using Mask-GRPO, we improve a base model, Show-o, with substantial improvements on standard T2I benchmarks and preference alignment, outperforming existing state-of-the-art approaches. The code is available on https://github.com/

We address the challenge of relighting a single image or video, a task that demands precise scene intrinsic understanding and high-quality light transport synthesis. Existing end-to-end relighting models are often limited by the scarcity of paired multi-illumination data, restricting their ability to generalize across diverse scenes. Conversely, two-stage pipelines that combine inverse and forward rendering can mitigate data requirements but are susceptible to error accumulation and often fail to produce realistic outputs under complex lighting conditions or with sophisticated materials. In this work, we introduce a general-purpose approach that jointly estimates albedo and synthesizes relit outputs in a single pass, harnessing the generative capabilities of video diffusion models. This joint formulation enhances implicit scene comprehension and facilitates the creation of realistic lighting effects and intricate material interactions, such as shadows, reflections, and transparency. Trained on synthetic multi-illumination data and extensive automatically labeled real-world videos, our model demonstrates strong generalization across diverse domains and surpasses previous methods in both visual fidelity and temporal consistency.

We present TIDES, a text informed design approach for generating physically sound designs based on a textual description and a set of physical constraints.

Deep multi-modal clustering (DMC) aims to explore the correlated information from different modalities to improve the clustering performance. Most existing DMCs attempt to investigate the consistency or/and complementarity information by fusing all modalities, but this will lead to the following challenges: 1) Information conflicts between modalities emerge.

Label Distribution Learning (LDL) has emerged as a powerful framework for estimating complete conditional label distributions, providing crucial reliability for risk-sensitive decision-making tasks. While existing LDL algorithms exhibit competent performance under the conventional LDL performance evaluation methods, two key limitations remain: (1) current algorithms systematically underperform on the samples with low-entropy label distributions, which can be particularly valuable for decision making, and (2) the conventional performance evaluation methods are inherently biased due to the numerical imbalance of samples. In this paper, through empirical and theoretical analyses, we find that excessive cohesion between anchor vectors contributes significantly to the observed entropy bias phenomenon in LDL algorithms. Accordingly, we propose an inter-anchor angular regularization term that mitigates cohesion among anchor vectors by penalizing over-small angles. Besides, to alleviate the numerical imbalance of high-entropy samples in test set, we propose an entropy-calibrated aggregation strategy that obtains the overall model performance by evaluating performance on the low-entropy and high-entropy subsets of the overall test set separately. Finally, we conduct extensive experiments on various real-world datasets to demonstrate the effectiveness of our proposal.

Recent results show that modern Large Language Models (LLM) are capable of understanding and answering questions about structured data such as graphs. Existing proposals often use some description of the graph to create an "augmented" prompt fed to the LLM. For a chosen class of graphs, if a well-tailored graph encoder is deployed to play together with a pre-trained LLM, the model can answer graph-related questions well. Current solutions to graph-based prompts range from graph serialization to graph transformers. In this work, we show that the use of a parameter-free graph encoder based on Fock space representations, a concept borrowed from physics, is remarkably versatile in this problem setting. The simple construction, with a few small adjustments, can provide rich and informative graph encodings, for a wide range of different graphs. We investigate the use of this idea for prefix-tuned prompts leveraging the capabilities of a pre-trained, frozen LLM. The modifications lead to a model that can answer graph-related questions - from simple graphs to proteins to hypergraphs - effectively and with minimal, if any, adjustments to the architecture.

Multivariate time series (MTS) classification has attracted increasing attention across various domains. Existing methods either decompose MTS into separate univariate series, ignoring inter-variable dependencies, or jointly model all variables, which may lead to over-smoothing and loss of semantic structure. These limitations become particularly pronounced when dealing with complex and heterogeneous variable types. To address these challenges, we propose SwinGroupNet (SGN), which explores a novel perspective for constructing variable interaction and temporal dependency. Specifically, SGN processes multi-scale time series using (1) Variable Group Embedding (VGE), which partitions variables into groups and performs independent group-wise embedding; (2) Multi-Scale Group Window Mixing (MGWM), which reconstructs variable interactions by modeling both intra-group and inter-group dependencies while extracting multi-scale temporal features; and (3) Periodic Window Shifting and Merging (PWSM), which exploits inherent periodic patterns to enable hierarchical temporal interaction and feature aggregation. Extensive experiments on diverse benchmark datasets from multiple domains demonstrate that SGN consistently achieves state-of-the-art performance, with an average improvement of 4.2% over existing methods. We release the source code at https://github.com/colison/SGN.

Reinforcement Learning from Human Feedback (RLHF) has emerged as a key technique for post-training large language models. Despite its empirical success, the theoretical understanding of RLHF is still limited, as learning the KL-regularized target with only preference feedback poses additional challenges compared with canonical RL. Existing works mostly study the reward-based Bradley-Terry (BT) preference model, and extend classical designs utilizing optimism or pessimism. This work, instead, considers the general preference model (whose practical relevance has been observed recently) and obtains performance guarantees with major, order-wise improvements over existing ones. Surprisingly, these results are derived from algorithms that directly use the empirical estimates (i.e., greedy sampling), as opposed to constructing optimistic or pessimistic estimates in previous works. This insight has a deep root in the unique structural property of the optimal policy class under the KL-regularized target, and we further specialize it to the BT model, highlighting the surprising sufficiency of greedy sampling in RLHF.

The growing demand for efficient deep learning has positioned dataset distillation as a pivotal technique for compressing training dataset while preserving model performance. However, existing inner-loop optimization methods for dataset distillation typically rely on random truncation strategies, which lack flexibility and often yield suboptimal results. In this work, we observe that neural networks exhibit distinct learning dynamics across different training stages--early, middle, and late--making random truncation ineffective. To address this limitation, we propose Automatic Truncated Backpropagation Through Time (AT-BPTT), a novel framework that dynamically adapts both truncation positions and window sizes according to intrinsic gradient behavior. AT-BPTT introduces three key components: (1) a probabilistic mechanism for stage-aware timestep selection, (2) an adaptive window sizing strategy based on gradient variation, and (3) a low-rank Hessian approximation to reduce computational overhead. Extensive experiments on CIFAR-10, CIFAR-100, Tiny-ImageNet, and ImageNet-1K show that AT-BPTT achieves state-of-the-art performance, improving accuracy by an average of 6.16% over baseline methods. Moreover, our approach accelerates inner-loop optimization by 3.9 while saving 63% memory cost.