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A Comprehensive Review of Computer-aided Whole-slide Image Analysis: from Datasets to Feature Extraction, Segmentation, Classification, and Detection Approaches

arXiv.org Artificial Intelligence

With the development of computer-aided diagnosis (CAD) and image scanning technology, Whole-slide Image (WSI) scanners are widely used in the field of pathological diagnosis. Therefore, WSI analysis has become the key to modern digital pathology. Since 2004, WSI has been used more and more in CAD. Since machine vision methods are usually based on semi-automatic or fully automatic computers, they are highly efficient and labor-saving. The combination of WSI and CAD technologies for segmentation, classification, and detection helps histopathologists obtain more stable and quantitative analysis results, save labor costs and improve diagnosis objectivity. This paper reviews the methods of WSI analysis based on machine learning. Firstly, the development status of WSI and CAD methods are introduced. Secondly, we discuss publicly available WSI datasets and evaluation metrics for segmentation, classification, and detection tasks. Then, the latest development of machine learning in WSI segmentation, classification, and detection are reviewed continuously. Finally, the existing methods are studied, the applicabilities of the analysis methods are analyzed, and the application prospects of the analysis methods in this field are forecasted.


Pruning the Index Contents for Memory Efficient Open-Domain QA

arXiv.org Artificial Intelligence

This work presents a novel pipeline that demonstrates what is achievable with a combined effort of state-of-the-art approaches, surpassing the 50% exact match on NaturalQuestions and EfficentQA datasets. Specifically, it proposes the novel R2-D2 (Rank twice, reaD twice) pipeline composed of retriever, reranker, extractive reader, generative reader and a simple way to combine them. Furthermore, previous work often comes with a massive index of external documents that scales in the order of tens of GiB. This work presents a simple approach for pruning the contents of a massive index such that the open-domain QA system altogether with index, OS, and library components fits into 6GiB docker image while retaining only 8% of original index contents and losing only 3% EM accuracy.


Inductive logic programming at 30

arXiv.org Artificial Intelligence

Inductive logic programming (ILP) is a form of logic-based machine learning. The goal of ILP is to induce a hypothesis (a logic program) that generalises given training examples and background knowledge. As ILP turns 30, we survey recent work in the field. In this survey, we focus on (i) new meta-level search methods, (ii) techniques for learning recursive programs that generalise from few examples, (iii) new approaches for predicate invention, and (iv) the use of different technologies, notably answer set programming and neural networks. We conclude by discussing some of the current limitations of ILP and discuss directions for future research.


CheckSoft : A Scalable Event-Driven Software Architecture for Keeping Track of People and Things in People-Centric Spaces

arXiv.org Artificial Intelligence

We present CheckSoft, a scalable event-driven software architecture for keeping track of people-object interactions in people-centric applications such as airport checkpoint security areas, automated retail stores, smart libraries, and so on. The architecture works off the video data generated in real time by a network of surveillance cameras. Although there are many different aspects to automating these applications, the most difficult part of the overall problem is keeping track of the interactions between the people and the objects. CheckSoft uses finite-state-machine (FSM) based logic for keeping track of such interactions which allows the system to quickly reject any false detections of the interactions by the video cameras. CheckSoft is easily scalable since the architecture is based on multi-processing in which a separate process is assigned to each human and to each "storage container" for the objects. A storage container may be a shelf on which the objects are displayed or a bin in which the objects are stored, depending on the specific application in which CheckSoft is deployed.


Best of arXiv.org for AI, Machine Learning, and Deep Learning – January 2021 - insideBIGDATA

#artificialintelligence

Researchers from all over the world contribute to this repository as a prelude to the peer review process for publication in traditional journals. The articles listed below represent a small fraction of all articles appearing on the preprint server. They are listed in no particular order with a link to each paper along with a brief overview. Links to GitHub repos are provided when available. Especially relevant articles are marked with a "thumbs up" icon.


Applications of deep learning in traffic congestion alleviation: A survey

arXiv.org Machine Learning

Prediction tasks related to congestion are targeted at improving the level of service of the transportation network. With increasing access to larger datasets of higher resolution, the relevance of deep learning in such prediction tasks, is increasing. Several comprehensive survey papers in recent years have summarised the deep learning applications in the transportation domain. However, the system dynamics of the transportation network vary greatly between the non-congested state and the congested state -- thereby necessitating the need for a clear understanding of the challenges specific to congestion prediction. In this survey, we present the current state of deep learning applications in the tasks related to detection, prediction and propagation of congestion. Recurrent and non-recurrent congestion are discussed separately. Our survey leads us to uncover inherent challenges and gaps in the current state of research. Finally, we present some suggestions for future research directions as answers to the identified challenges.


A Review of Biomedical Datasets Relating to Drug Discovery: A Knowledge Graph Perspective

arXiv.org Artificial Intelligence

Drug discovery and development is an extremely complex process, with high attrition contributing to the costs of delivering new medicines to patients. Recently, various machine learning approaches have been proposed and investigated to help improve the effectiveness and speed of multiple stages of the drug discovery pipeline. Among these techniques, it is especially those using Knowledge Graphs that are proving to have considerable promise across a range of tasks, including drug repurposing, drug toxicity prediction and target gene-disease prioritisation. In such a knowledge graph-based representation of drug discovery domains, crucial elements including genes, diseases and drugs are represented as entities or vertices, whilst relationships or edges between them indicate some level of interaction. For example, an edge between a disease and drug entity might represent a successful clinical trial, or an edge between two drug entities could indicate a potentially harmful interaction. In order to construct high-quality and ultimately informative knowledge graphs however, suitable data and information is of course required. In this review, we detail publicly available primary data sources containing information suitable for use in constructing various drug discovery focused knowledge graphs. We aim to help guide machine learning and knowledge graph practitioners who are interested in applying new techniques to the drug discovery field, but who may be unfamiliar with the relevant data sources. Overall we hope this review will help motivate more machine learning researchers to explore combining knowledge graphs and machine learning to help solve key and emerging questions in the drug discovery domain.


Analytics and Machine Learning in Vehicle Routing Research

arXiv.org Artificial Intelligence

The Vehicle Routing Problem (VRP) is one of the most intensively studied combinatorial optimisation problems for which numerous models and algorithms have been proposed. To tackle the complexities, uncertainties and dynamics involved in real-world VRP applications, Machine Learning (ML) methods have been used in combination with analytical approaches to enhance problem formulations and algorithmic performance across different problem solving scenarios. However, the relevant papers are scattered in several traditional research fields with very different, sometimes confusing, terminologies. This paper presents a first, comprehensive review of hybrid methods that combine analytical techniques with ML tools in addressing VRP problems. Specifically, we review the emerging research streams on ML-assisted VRP modelling and ML-assisted VRP optimisation. We conclude that ML can be beneficial in enhancing VRP modelling, and improving the performance of algorithms for both online and offline VRP optimisations. Finally, challenges and future opportunities of VRP research are discussed.


Trends in Vehicle Re-identification Past, Present, and Future: A Comprehensive Review

arXiv.org Artificial Intelligence

Vehicle Re-identification (re-id) over surveillance camera network with non-overlapping field of view is an exciting and challenging task in intelligent transportation systems (ITS). Due to its versatile applicability in metropolitan cities, it gained significant attention. Vehicle re-id matches targeted vehicle over non-overlapping views in multiple camera network. However, it becomes more difficult due to inter-class similarity, intra-class variability, viewpoint changes, and spatio-temporal uncertainty. In order to draw a detailed picture of vehicle re-id research, this paper gives a comprehensive description of the various vehicle re-id technologies, applicability, datasets, and a brief comparison of different methodologies. Our paper specifically focuses on vision-based vehicle re-id approaches, including vehicle appearance, license plate, and spatio-temporal characteristics. In addition, we explore the main challenges as well as a variety of applications in different domains. Lastly, a detailed comparison of current state-of-the-art methods performances over VeRi-776 and VehicleID datasets is summarized with future directions. We aim to facilitate future research by reviewing the work being done on vehicle re-id till to date.


iX-BSP: Incremental Belief Space Planning

arXiv.org Artificial Intelligence

Deciding what's next? is a fundamental problem in robotics and Artificial Intelligence. Under belief space planning (BSP), in a partially observable setting, it involves calculating the expected accumulated belief-dependent reward, where the expectation is with respect to all future measurements. Since solving this general un-approximated problem quickly becomes intractable, state of the art approaches turn to approximations while still calculating planning sessions from scratch. In this work we propose a novel paradigm, Incremental BSP (iX-BSP), based on the key insight that calculations across planning sessions are similar in nature and can be appropriately re-used. We calculate the expectation incrementally by utilizing Multiple Importance Sampling techniques for selective re-sampling and re-use of measurement from previous planning sessions. The formulation of our approach considers general distributions and accounts for data association aspects. We demonstrate how iX-BSP could benefit existing approximations of the general problem, introducing iML-BSP, which re-uses calculations across planning sessions under the common Maximum Likelihood assumption. We evaluate both methods and demonstrate a substantial reduction in computation time while statistically preserving accuracy. The evaluation includes both simulation and real-world experiments considering autonomous vision-based navigation and SLAM. As a further contribution, we introduce to iX-BSP the non-integral wildfire approximation, allowing one to trade accuracy for computational performance by averting from updating re-used beliefs when they are "close enough". We evaluate iX-BSP under wildfire demonstrating a substantial reduction in computation time while controlling the accuracy sacrifice. We also provide analytical and empirical bounds of the effect wildfire holds over the objective value.