With the rapid amassing of spatial-temporal (ST) ocean data, many spatial-temporal data mining (STDM) studies have been conducted to address various oceanic issues, including climate forecasting and disaster warning. Compared with typical ST data (e.g., traffic data), ST ocean data is more complicated but with unique characteristics, e.g., diverse regionality and high sparsity. These characteristics make it difficult to design and train STDM models on ST ocean data. To the best of our knowledge, a comprehensive survey of existing studies remains missing in the literature, which hinders not only computer scientists from identifying the research issues in ocean data mining but also ocean scientists to apply advanced STDM techniques. In this paper, we provide a comprehensive survey of existing STDM studies for ocean science. Concretely, we first review the widely-used ST ocean datasets and highlight their unique characteristics. Then, typical ST ocean data quality enhancement techniques are explored. Next, we classify existing STDM studies in ocean science into four types of tasks, i.e., prediction, event detection, pattern mining, and anomaly detection, and elaborate on the techniques for these tasks. Finally, promising research opportunities are discussed. This survey can help scientists from both computer science and ocean science better understand the fundamental concepts, key techniques, and open challenges of STDM for ocean science.

Deep reinforcement learning algorithms (DRL) are increasingly being used in safety-critical systems. Ensuring the safety of DRL agents is a critical concern in such contexts. However, relying solely on testing is not sufficient to ensure safety as it does not offer guarantees. Building safety monitors is one solution to alleviate this challenge. This paper proposes SMARLA, a machine learning-based safety monitoring approach designed for DRL agents. For practical reasons, SMARLA is designed to be black-box (as it does not require access to the internals of the agent) and leverages state abstraction to reduce the state space and thus facilitate the learning of safety violation prediction models from agent's states. We validated SMARLA on two well-known RL case studies. Empirical analysis reveals that SMARLA achieves accurate violation prediction with a low false positive rate, and can predict safety violations at an early stage, approximately halfway through the agent's execution before violations occur.

Machine Learning (ML) has shown significant potential in various applications; however, its adoption in privacy-critical domains has been limited due to concerns about data privacy. A promising solution to this issue is Federated Machine Learning (FedML), a model-to-data approach that prioritizes data privacy. By enabling ML algorithms to be applied directly to distributed data sources without sharing raw data, FedML offers enhanced privacy protections, making it suitable for privacy-critical environments. Despite its theoretical benefits, FedML has not seen widespread practical implementation. This study aims to explore the current state of applied FedML and identify the challenges hindering its practical adoption. Through a comprehensive systematic literature review, we assess 74 relevant papers to analyze the real-world applicability of FedML. Our analysis focuses on the characteristics and emerging trends of FedML implementations, as well as the motivational drivers and application domains. We also discuss the encountered challenges in integrating FedML into real-life settings. By shedding light on the existing landscape and potential obstacles, this research contributes to the further development and implementation of FedML in privacy-critical scenarios.

This paper presents a retrospective overview of a decade of research in our department towards self-organizing personal knowledge assistants in evolving corporate memories. Our research is typically inspired by real-world problems and often conducted in interdisciplinary collaborations with research and industry partners. We summarize past experiments and results comprising topics like various ways of knowledge graph construction in corporate and personal settings, Managed Forgetting and (Self-organizing) Context Spaces as a novel approach to Personal Information Management (PIM) and knowledge work support. Past results are complemented by an overview of related work and some of our latest findings not published so far. Last, we give an overview of our related industry use cases including a detailed look into CoMem, a Corporate Memory based on our presented research already in productive use and providing challenges for further research. Many contributions are only first steps in new directions with still a lot of untapped potential, especially with regard to further increasing the automation in PIM and knowledge work support.

Unsupervised representation learning approaches aim to learn discriminative feature representations from unlabeled data, without the requirement of annotating every sample. Enabling unsupervised representation learning is extremely crucial for time series data, due to its unique annotation bottleneck caused by its complex characteristics and lack of visual cues compared with other data modalities. In recent years, unsupervised representation learning techniques have advanced rapidly in various domains. However, there is a lack of systematic analysis of unsupervised representation learning approaches for time series. To fill the gap, we conduct a comprehensive literature review of existing rapidly evolving unsupervised representation learning approaches for time series. Moreover, we also develop a unified and standardized library, named ULTS (i.e., Unsupervised Learning for Time Series), to facilitate fast implementations and unified evaluations on various models. With ULTS, we empirically evaluate state-of-the-art approaches, especially the rapidly evolving contrastive learning methods, on 9 diverse real-world datasets. We further discuss practical considerations as well as open research challenges on unsupervised representation learning for time series to facilitate future research in this field.

Temporal data, representing chronological observations of complex systems, has always been a typical data structure that can be widely generated by many domains, such as industry, medicine and finance. Analyzing this type of data is extremely valuable for various applications. Thus, different temporal data analysis tasks, eg, classification, clustering and prediction, have been proposed in the past decades. Among them, causal discovery, learning the causal relations from temporal data, is considered an interesting yet critical task and has attracted much research attention. Existing causal discovery works can be divided into two highly correlated categories according to whether the temporal data is calibrated, ie, multivariate time series causal discovery, and event sequence causal discovery. However, most previous surveys are only focused on the time series causal discovery and ignore the second category. In this paper, we specify the correlation between the two categories and provide a systematical overview of existing solutions. Furthermore, we provide public datasets, evaluation metrics and new perspectives for temporal data causal discovery.

Integrating knowledge across different domains is an essential feature of human learning. Learning paradigms such as transfer learning, meta learning, and multi-task learning reflect the human learning process by exploiting the prior knowledge for new tasks, encouraging faster learning and good generalization for new tasks. This article gives a detailed view of these learning paradigms and their comparative analysis. The weakness of one learning algorithm turns out to be a strength of another, and thus merging them is a prevalent trait in the literature. There are numerous research papers that focus on each of these learning paradigms separately and provide a comprehensive overview of them. However, this article provides a review of research studies that combine (two of) these learning algorithms. This survey describes how these techniques are combined to solve problems in many different fields of study, including computer vision, natural language processing, hyperspectral imaging, and many more, in supervised setting only. As a result, the global generic learning network an amalgamation of meta learning, transfer learning, and multi-task learning is introduced here, along with some open research questions and future research directions in the multi-task setting.

Phase recovery (PR) refers to calculating the phase of the light field from its intensity measurements. As exemplified from quantitative phase imaging and coherent diffraction imaging to adaptive optics, PR is essential for reconstructing the refractive index distribution or topography of an object and correcting the aberration of an imaging system. In recent years, deep learning (DL), often implemented through deep neural networks, has provided unprecedented support for computational imaging, leading to more efficient solutions for various PR problems. In this review, we first briefly introduce conventional methods for PR. Then, we review how DL provides support for PR from the following three stages, namely, pre-processing, in-processing, and post-processing. We also review how DL is used in phase image processing. Finally, we summarize the work in DL for PR and outlook on how to better use DL to improve the reliability and efficiency in PR.

Calibrating deep neural models plays an important role in building reliable, robust AI systems in safety-critical applications. Recent work has shown that modern neural networks that possess high predictive capability are poorly calibrated and produce unreliable model predictions. Though deep learning models achieve remarkable performance on various benchmarks, the study of model calibration and reliability is relatively underexplored. Ideal deep models should have not only high predictive performance but also be well calibrated. There have been some recent methods proposed to calibrate deep models by using different mechanisms. In this survey, we review the state-of-the-art calibration methods and provide an understanding of their principles for performing model calibration. First, we start with the definition of model calibration and explain the root causes of model miscalibration. Then we introduce the key metrics that can measure this aspect. It is followed by a summary of calibration methods that we roughly classified into four categories: post-hoc calibration, regularization methods, uncertainty estimation, and composition methods. We also covered some recent advancements in calibrating large models, particularly large language models (LLMs). Finally, we discuss some open issues, challenges, and potential directions.

Machine learning (ML) is a promising approach for predicting small molecule properties in drug discovery. Here, we provide a comprehensive overview of various ML methods introduced for this purpose in recent years. We review a wide range of properties, including binding affinities, solubility, and ADMET (Absorption, Distribution, Metabolism, Excretion, and Toxicity). We discuss existing popular datasets and molecular descriptors and embeddings, such as chemical fingerprints and graph-based neural networks. We highlight also challenges of predicting and optimizing multiple properties during hit-to-lead and lead optimization stages of drug discovery and explore briefly possible multi-objective optimization techniques that can be used to balance diverse properties while optimizing lead candidates. Finally, techniques to provide an understanding of model predictions, especially for critical decision-making in drug discovery are assessed. Overall, this review provides insights into the landscape of ML models for small molecule property predictions in drug discovery. So far, there are multiple diverse approaches, but their performances are often comparable. Neural networks, while more flexible, do not always outperform simpler models. This shows that the availability of high-quality training data remains crucial for training accurate models and there is a need for standardized benchmarks, additional performance metrics, and best practices to enable richer comparisons between the different techniques and models that can shed a better light on the differences between the many techniques.