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VIBES: A Variational Inference Engine for Bayesian Networks

Neural Information Processing Systems

In recent years variational methods have become a popular tool for approximate inference and learning in a wide variety of probabilistic models.For each new application, however, it is currently necessary first to derive the variational update equations, and then to implement them in application-specific code. Each of these steps is both time consuming and error prone. In this paper we describe a general purpose inference engine called VIBES ('Variational Inference forBayesian Networks') which allows a wide variety of probabilistic modelsto be implemented and solved variationally without recourse to coding. New models are specified either through a simple script or via a graphical interface analogous to a drawing package. VIBES then automatically generates and solves the variational equations.We illustrate the power and flexibility of VIBES using examples from Bayesian mixture modelling.


Feature Selection by Maximum Marginal Diversity

Neural Information Processing Systems

We address the question of feature selection in the context of visual recognition. It is shown that, besides efficient from a computational standpoint, the infomax principle is nearly optimal in the minimum Bayes error sense. The concept of marginal diversity is introduced, leading toa generic principle for feature selection (the principle of maximum marginal diversity) of extreme computational simplicity. The relationships betweeninfomax and the maximization of marginal diversity are identified, uncovering the existence of a family of classification procedures forwhich near optimal (in the Bayes error sense) feature selection does not require combinatorial search. Examination of this family in light of recent studies on the statistics of natural images suggests that visual recognition problems are a subset of it.


How to Combine Color and Shape Information for 3D Object Recognition: Kernels do the Trick

Neural Information Processing Systems

This paper presents a kernel method that allows to combine color and shape information for appearance-based object recognition. It doesn't require to define a new common representation, but use the power of kernels to combine different representations together in an effective manner. These results are achieved using results of statistical mechanicsof spin glasses combined with Markov random fields via kernel functions. Experiments show an increase in recognition rate up to 5.92% with respect to conventional strategies. 1 Introduction Consider the two cars in Figure 1. They look very similar, but this wouldn't be the case if we would look at color pictures: as the left car is yellow and the right car is red, we would realize at a first glance that they are different.


Going Metric: Denoising Pairwise Data

Neural Information Processing Systems

Pairwise data in empirical sciences typically violate metricity, either dueto noise or due to fallible estimates, and therefore are hard to analyze by conventional machine learning technology. In this paper we therefore study ways to work around this problem. First, we present an alternative embedding to multidimensional scaling (MDS) that allows us to apply a variety of classical machine learningand signal processing algorithms. The class of pairwise grouping algorithms which share the shift-invariance property is statistically invariant under this embedding procedure, leading to identical assignments of objects to clusters. Based on this new vectorial representation, denoising methods are applied in a second step.Both steps provide a theoretically well controlled setup to translate from pairwise data to the respective denoised metric representation.We demonstrate the practical usefulness of our theoretical reasoning by discovering structure in protein sequence data bases, visibly improving performance upon existing automatic methods. 1 Introduction Unsupervised grouping or clustering aims at extracting hidden structure from data (see e.g.


Constraint Classification for Multiclass Classification and Ranking

Neural Information Processing Systems

We present a meta-algorithm for learning in this framework that learns via a single linear classifier in high dimension. We discuss distribution independent as well as margin-based generalization bounds and present empirical and theoretical evidence showing that constraint classification benefits over existing methods of multiclass classification.


Adaptation and Unsupervised Learning

Neural Information Processing Systems

Adaptation is a ubiquitous neural and psychological phenomenon, with a wealth of instantiations and implications. Although a basic form of plasticity, it has, bar some notable exceptions, attracted computational theory of only one main variety. In this paper, we study adaptation from the perspective of factor analysis, a paradigmatic technique of unsupervised learning.We use factor analysis to reinterpret a standard view of adaptation, and apply our new model to some recent data on adaptation in the domain of face discrimination.


Combining Features for BCI

Neural Information Processing Systems

Recently, interest is growing to develop an effective communication interface connectingthe human brain to a computer, the'Brain-Computer Interface' (BCI). One motivation of BCI research is to provide a new communication channel substituting normal motor output in patients with severe neuromuscular disabilities. In the last decade, various neurophysiological corticalprocesses, such as slow potential shifts, movement related potentials (MRPs) or event-related desynchronization (ERD) of spontaneous EEG rhythms, were shown to be suitable for BCI, and, consequently, differentindependent approaches of extracting BCI-relevant EEGfeatures for single-trial analysis are under investigation. Here, we present and systematically compare several concepts for combining such EEGfeatures to improve the single-trial classification. Feature combinations areevaluated on movement imagination experiments with 3 subjects where EEGfeatures are based on either MRPs or ERD, or both. Those combination methods that incorporate the assumption that the single EEG-featuresare physiologically mutually independent outperform the plain method of'adding' evidence where the single-feature vectors are simply concatenated. These results strengthen the hypothesis that MRP and ERD reflect at least partially independent aspects of cortical processes and open a new perspective to boost BCI effectiveness.


Fast Sparse Gaussian Process Methods: The Informative Vector Machine

Neural Information Processing Systems

We present a framework for sparse Gaussian process (GP) methods which uses forward selection with criteria based on informationtheoretic principles,previously suggested for active learning. Our goal is not only to learn d-sparse predictors (which can be evaluated inO(d) rather than O(n), d n, n the number of training points), but also to perform training under strong restrictions on time and memory requirements.


Feature Selection in Mixture-Based Clustering

Neural Information Processing Systems

There exist many approaches to clustering, but the important issue of feature selection, i.e., selecting the data attributes that are relevant for clustering, is rarely addressed. Feature selection for clustering is difficult due to the absence of class labels. We propose two approaches to feature selection in the context of Gaussian mixture-based clustering. In the first one, instead of making hard selections, we estimate feature saliencies. An expectation-maximization (EM) algorithm is derived for this task. The second approach extends Koller and Sahami's mutual-informationbased featurerelevance criterion to the unsupervised case. Feature selection is then carried out by a backward search scheme. This scheme can be classified as a "wrapper", since it wraps mixture estimation in an outer layer that performs feature selection. Experimental results on synthetic and real data show that both methods have promising performance.


The Effect of Singularities in a Learning Machine when the True Parameters Do Not Lie on such Singularities

Neural Information Processing Systems

A lot of learning machines with hidden variables used in information sciencehave singularities in their parameter spaces. At singularities, the Fisher information matrix becomes degenerate, resulting that the learning theory of regular statistical models does not hold. Recently, it was proven that, if the true parameter is contained in singularities, then the coefficient of the Bayes generalization erroris equal to the pole of the zeta function of the Kullback information.