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Model Selection for Gaussian Mixture Models
Huang, Tao, Peng, Heng, Zhang, Kun
Finite mixture modeling is a flexible and powerful approach to modeling data that is heterogeneous and stems from multiple populations, such as data from patter recognition, computer vision, image analysis, and machine learning. The Gaussian mixture model is an important mixture model family. It is well known that any continuous distribution can be approximated arbitrarily well by a finite mixture of normal densities (Lindsay, 1995; McLachlan and Peel, 2000). However, as demonstrated by Chen (1995), when the number of components is unknown, the optimal convergence rate of the estimate of a finite mixture model is slower than the optimal convergence rate when the number is known. In practice, with too many components, the mixture may overfit the data and yield poor interpretations, while with too few components, the mixture may not be flexible enough to approximate the true underlying data structure.
Stochastic Pooling for Regularization of Deep Convolutional Neural Networks
Zeiler, Matthew D., Fergus, Rob
We introduce a simple and effective method for regularizing large convolutional neural networks. We replace the conventional deterministic pooling operations with a stochastic procedure, randomly picking the activation within each pooling region according to a multinomial distribution, given by the activities within the pooling region. The approach is hyper-parameter free and can be combined with other regularization approaches, such as dropout and data augmentation. We achieve state-of-the-art performance on four image datasets, relative to other approaches that do not utilize data augmentation.
An Efficient Sufficient Dimension Reduction Method for Identifying Genetic Variants of Clinical Significance
Fast and cheaper next generation sequencing technologies will generate unprecedentedly massive and highly-dimensional genomic and epigenomic variation data. In the near future, a routine part of medical record will include the sequenced genomes. A fundamental question is how to efficiently extract genomic and epigenomic variants of clinical utility which will provide information for optimal wellness and interference strategies. Traditional paradigm for identifying variants of clinical validity is to test association of the variants. However, significantly associated genetic variants may or may not be usefulness for diagnosis and prognosis of diseases. Alternative to association studies for finding genetic variants of predictive utility is to systematically search variants that contain sufficient information for phenotype prediction. To achieve this, we introduce concepts of sufficient dimension reduction and coordinate hypothesis which project the original high dimensional data to very low dimensional space while preserving all information on response phenotypes. We then formulate clinically significant genetic variant discovery problem into sparse SDR problem and develop algorithms that can select significant genetic variants from up to or even ten millions of predictors with the aid of dividing SDR for whole genome into a number of subSDR problems defined for genomic regions. The sparse SDR is in turn formulated as sparse optimal scoring problem, but with penalty which can remove row vectors from the basis matrix. To speed up computation, we develop the modified alternating direction method for multipliers to solve the sparse optimal scoring problem which can easily be implemented in parallel. To illustrate its application, the proposed method is applied to simulation data and the NHLBI's Exome Sequencing Project dataset
Anomaly Classification with the Anti-Profile Support Vector Machine
Dinalankara, Wikum, Bravo, Hector Corrada
We introduce the anti-profile Support Vector Machine (apSVM) as a novel algorithm to address the anomaly classification problem, an extension of anomaly detection where the goal is to distinguish data samples from a number of anomalous and heterogeneous classes based on their pattern of deviation from a normal stable class. We show that under heterogeneity assumptions defined here that the apSVM can be solved as the dual of a standard SVM with an indirect kernel that measures similarity of anomalous samples through similarity to the stable normal class. We characterize this indirect kernel as the inner product in a Reproducing Kernel Hilbert Space between representers that are projected to the subspace spanned by the representers of the normal samples. We show by simulation and application to cancer genomics datasets that the anti-profile SVM produces classifiers that are more accurate and stable than the standard SVM in the anomaly classification setting.
Fano schemes of generic intersections and machine learning
We investigate Fano schemes of conditionally generic intersections, i.e. of hypersurfaces in projective space chosen generically up to additional conditions. Via a correspondence between generic properties of algebraic varieties and events in probability spaces that occur with probability one, we use the obtained results on Fano schemes to solve a problem in machine learning.
Matrix Approximation under Local Low-Rank Assumption
Lee, Joonseok, Kim, Seungyeon, Lebanon, Guy, Singer, Yoram
Matrix approximation is a common tool in machine learning for building accurate prediction models for recommendation systems, text mining, and computer vision. A prevalent assumption in constructing matrix approximations is that the partially observed matrix is of low-rank. We propose a new matrix approximation model where we assume instead that the matrix is only locally of low-rank, leading to a representation of the observed matrix as a weighted sum of low-rank matrices. We analyze the accuracy of the proposed local low-rank modeling. Our experiments show improvements of prediction accuracy in recommendation tasks.
Multiple functional regression with both discrete and continuous covariates
Kadri, Hachem, Preux, Philippe, Duflos, Emmanuel, Canu, Stéphane
In this paper we present a nonparametric method for extending functional regression methodology to the situation where more than one functional covariate is used to predict a functional response. Borrowing the idea from Kadri et al. (2010a), the method, which support mixed discrete and continuous explanatory variables, is based on estimating a function-valued function in reproducing kernel Hilbert spaces by virtue of positive operator-valued kernels.
A Triclustering Approach for Time Evolving Graphs
Guigourès, Romain, Boullé, Marc, Rossi, Fabrice
This paper introduces a novel technique to track structures in time evolving graphs. The method is based on a parameter free approach for three-dimensional co-clustering of the source vertices, the target vertices and the time. All these features are simultaneously segmented in order to build time segments and clusters of vertices whose edge distributions are similar and evolve in the same way over the time segments. The main novelty of this approach lies in that the time segments are directly inferred from the evolution of the edge distribution between the vertices, thus not requiring the user to make an a priori discretization. Experiments conducted on a synthetic dataset illustrate the good behaviour of the technique, and a study of a real-life dataset shows the potential of the proposed approach for exploratory data analysis.
Functional Regularized Least Squares Classi cation with Operator-valued Kernels
Kadri, Hachem, Rabaoui, Asma, Preux, Philippe, Duflos, Emmanuel, Rakotomamonjy, Alain
Although operator-valued kernels have recently received increasing interest in various machine learning and functional data analysis problems such as multi-task learning or functional regression, little attention has been paid to the understanding of their associated feature spaces. In this paper, we explore the potential of adopting an operator-valued kernel feature space perspective for the analysis of functional data. We then extend the Regularized Least Squares Classification (RLSC) algorithm to cover situations where there are multiple functions per observation. Experiments on a sound recognition problem show that the proposed method outperforms the classical RLSC algorithm.
Learning from Distributions via Support Measure Machines
Muandet, Krikamol, Fukumizu, Kenji, Dinuzzo, Francesco, Schölkopf, Bernhard
This paper presents a kernel-based discriminative learning framework on probability measures. Rather than relying on large collections of vectorial training examples, our framework learns using a collection of probability distributions that have been constructed to meaningfully represent training data. By representing these probability distributions as mean embeddings in the reproducing kernel Hilbert space (RKHS), we are able to apply many standard kernel-based learning techniques in straightforward fashion. To accomplish this, we construct a generalization of the support vector machine (SVM) called a support measure machine (SMM). Our analyses of SMMs provides several insights into their relationship to traditional SVMs. Based on such insights, we propose a flexible SVM (Flex-SVM) that places different kernel functions on each training example. Experimental results on both synthetic and real-world data demonstrate the effectiveness of our proposed framework.