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Infinite Structured Hidden Semi-Markov Models
Huggins, Jonathan H., Wood, Frank
This paper reviews recent advances in Bayesian nonparametric techniques for constructing and performing inference in infinite hidden Markov models. We focus on variants of Bayesian nonparametric hidden Markov models that enhance a posteriori state-persistence in particular. This paper also introduces a new Bayesian nonparametric framework for generating left-to- right and other structured, explicit-duration infinite hidden Markov models that we call the infinite structured hidden semi-Markov model .
Direct Density-Derivative Estimation and Its Application in KL-Divergence Approximation
Sasaki, Hiroaki, Noh, Yung-Kyun, Sugiyama, Masashi
Estimation of density derivatives is a versatile tool in statistical data analysis. A naive approach is to first estimate the density and then compute its derivative. However, such a two-step approach does not work well because a good density estimator does not necessarily mean a good density-derivative estimator. In this paper, we give a direct method to approximate the density derivative without estimating the density itself. Our proposed estimator allows analytic and computationally efficient approximation of multi-dimensional high-order density derivatives, with the ability that all hyper-parameters can be chosen objectively by cross-validation. We further show that the proposed density-derivative estimator is useful in improving the accuracy of non-parametric KL-divergence estimation via metric learning. The practical superiority of the proposed method is experimentally demonstrated in change detection and feature selection.
Data Requirement for Phylogenetic Inference from Multiple Loci: A New Distance Method
Dasarathy, Gautam, Nowak, Robert, Roch, Sebastien
We consider the problem of estimating the evolutionary history of a set of species (phylogeny or species tree) from several genes. It is known that the evolutionary history of individual genes (gene trees) might be topologically distinct from each other and from the underlying species tree, possibly confounding phylogenetic analysis. A further complication in practice is that one has to estimate gene trees from molecular sequences of finite length. We provide the first full data-requirement analysis of a species tree reconstruction method that takes into account estimation errors at the gene level. Under that criterion, we also devise a novel reconstruction algorithm that provably improves over all previous methods in a regime of interest.
Set Constraint Model and Automated Encoding into SAT: Application to the Social Golfer Problem
Lardeux, Frédéric, Monfroy, Eric, Crawford, Broderick, Soto, Ricardo
A CSP is defined by some variables (generally over finite domains) and constraints between these variables. Solving a CSP consists in finding assignments of the variables that satisfy the constraints. One of the main strength of CSP is declarativity: variables can be of various types (finite domains, floating point numbers, intervals, sets,...) and constraints as well (linear arithmetic constraints, set constraints, non linear constraints, Boolean constraints, symbolic constraints,...). Moreover, the so-called global constraints not only improve solving efficiency but also declarativity: they propose new constructs and relations such as alldifferent (to enforce that all the variables of a list have different values), cumulative (to schedule tasks sharing resources),... On the other hand, the propositional satisfiability problem (SAT) [12] is restricted (in terms of declarativity) to Boolean variables and propositional formulae. However, SAT solvers can now handle huge SAT instances (millions of variables).
Estimating the distribution of Galaxy Morphologies on a continuous space
Vinci, Giuseppe, Freeman, Peter, Newman, Jeffrey, Wasserman, Larry, Genovese, Christopher
The incredible variety of galaxy shapes cannot be summarized by human defined discrete classes of shapes without causing a possibly large loss of information. Dictionary learning and sparse coding allow us to reduce the high dimensional space of shapes into a manageable low dimensional continuous vector space. Statistical inference can be done in the reduced space via probability distribution estimation and manifold estimation.
Missing Entries Matrix Approximation and Completion
Shabat, Gil, Shmueli, Yaniv, Averbuch, Amir
We describe several algorithms for matrix completion and matrix approximation when only some of its entries are known. The approximation constraint can be any whose approximated solution is known for the full matrix. For low rank approximations, similar algorithms appears recently in the literature under different names. In this work, we introduce new theorems for matrix approximation and show that these algorithms can be extended to handle different constraints such as nuclear norm, spectral norm, orthogonality constraints and more that are different than low rank approximations. As the algorithms can be viewed from an optimization point of view, we discuss their convergence to global solution for the convex case. We also discuss the optimal step size and show that it is fixed in each iteration. In addition, the derived matrix completion flow is robust and does not require any parameters. This matrix completion flow is applicable to different spectral minimizations and can be applied to physics, mathematics and electrical engineering problems such as data reconstruction of images and data coming from PDEs such as Helmholtz equation used for electromagnetic waves.
An Efficient Hybrid CS and K-Means Algorithm for the Capacitated PMedian Problem
Mazinan, Hassan Gholami, Ahmadi, Gholam Reza, Khaji, Erfan
The capacitated P-median problem (CPMP) is an NPcomplete problem which investigates the problem of partitioning a set of N nodes into M different disjoint clusters, each represented by a certain node that is designed as concentrator. The NM nodes that are not chosen as concentrators are referred as terminals. The partitioning of the initial N nodes must be performed in such a way that a measure of total distance between the terminals and their corresponding concentrators is minimized. In addition, a capacity constraint imposed on the concentrators must be met, in order to obtain feasible solutions to the problem [1-4]. A direct application of the CPMP is in the context of communication networks deployment, where a set of terminals in the network must be assigned to the corresponding concentrator in order to compose access networks that satisfy the rate requirements of such terminals [5]. In this context, most of the efforts so far has focused on the topological design of communication networks (e.g. Wireless Sensor Networks (WSN), backbone networks or mobile networks [6-8]) since many of the processes involved in such networks can be approached as a CPMP problem, e.g.
Exponentially Increasing the Capacity-to-Computation Ratio for Conditional Computation in Deep Learning
Cho, Kyunghyun, Bengio, Yoshua
Yoshua Bengio Université de Montréal CIFAR Fellow Many state-of-the-art results obtained with deep networks are achieved with the largest models that could be trained, and if more computation power was available, we might be able to exploit much larger datasets in order to improve generalization ability. Whereas in learning algorithms such as decision trees the ratio of capacity (e.g., the number of parameters) to computation is very favorable (up to exponentially more parameters than computation), the ratio is essentially 1 for deep neural networks. Conditional computation has been proposed as a way to increase the capacity of a deep neural network without increasing the amount of computation required, by activating some parameters and computation "on-demand", on a per-example basis. In this note, we propose a novel parametrization of weight matrices in neural networks which has the potential to increase up to exponentially the ratio of the number of parameters to computation. The proposed approach is based on turning on some parameters (weight matrices) when specific bit patterns of hidden unit activations are obtained. In order to better control for the overfitting that might result, we propose a parametrization that is tree-structured, where each node of the tree corresponds to a prefix of a sequence of sign bits, or gating units, associated with hidden units.
Graphical structure of conditional independencies in determinantal point processes
Determinantal point process have recently been used as models in machine learning and this has raised questions regarding the characterizations of conditional independence. In this paper we investigate characterizations of conditional independence. We describe some conditional independencies through the conditions on the kernel of a determinantal point process, and show many can be obtained using the graph induced by a kernel of the L-ensemble. In recent years there have been several machine learning papers about the applications of determinantal point processes (DPP's) [4], [7], [8], [9]... An overview of theory, recent applications and problems in learning DPP's is given in a recent extensive survey [6] by Kulesza and Taskar. In a private communication with Ben Taskar, one of the questions from survey [6] (see §7.3), that remains for future research, was brought to author's attention: - Is there a simple characterization of the conditional independence relations encoded by a DPP? This question arises naturally having in mind conditional independence structure models (see [12]), such as graphical models (see [11]) that are often used. It turns out that, from the mathematical view point, elegant characterizations, similar to those in graphical models, exist. This paper provides two (main) characterizations: - the block in a Schur complement of the kernel has to be a 0-block (Theorem 16, Proposition 17); - we can use the structure of the graph induced by the kernel of the L-ensemble to read many conditional independencies in the process (Theorem 28, Proposition 30).
Learning Nonlinear Functions Using Regularized Greedy Forest
We consider the problem of learning a forest of nonlinear decision rules with general loss functions. The standard methods employ boosted decision trees such as Adaboost for exponential loss and Friedman's gradient boosting for general loss. In contrast to these traditional boosting algorithms that treat a tree learner as a black box, the method we propose directly learns decision forests via fully-corrective regularized greedy search using the underlying forest structure. Our method achieves higher accuracy and smaller models than gradient boosting (and Adaboost with exponential loss) on many datasets.