Learning about the social structure of hidden and hard-to-reach populations — such as drug users and sex workers — is a major goal of epidemiological and public health research on risk behaviors and disease prevention. Respondent-driven sampling (RDS) is a peer-referral process widely used by many health organizations, where research subjects recruit other subjects from their social network. In such surveys, researchers observe who recruited whom, along with the time of recruitment and the total number of acquaintances (network degree) of respondents. However, due to privacy concerns, the identities of acquaintances are not disclosed. In this work, we show how to reconstruct the underlying network structure through which the subjects are recruited. We formulate the dynamics of RDS as a continuous-time diffusion process over the underlying graph and derive the likelihood of the recruitment time series under an arbitrary inter-recruitment time distribution. We develop an efficient stochastic optimization algorithm called RENDER (REspoNdent-Driven nEtwork Reconstruction) that finds the network that best explains the collected data. We support our analytical results through an exhaustive set of experiments on both synthetic and real data.

The goal of connectomics is to manifest the interconnections of neural system with the Electron Microscopy (EM) images. However, the formidable size of EM image data renders human annotation impractical, as it may take decades to fulfill the whole job. An alternative way to reconstruct the connectome can be attained with the computerized scheme that can automatically segment the neuronal structures. The segmentation of EM images is very challenging as the depicted structures can be very diverse.To address this difficult problem, a deep contextual network is proposed here by leveraging multi-level contextual information from the deep hierarchical structure to achieve better segmentation performance.To further improve the robustness against the vanishing gradients and strengthen the capability of the back-propagation of gradient flow, auxiliary classifiers are incorporated in the architecture of our deep neural network. It will be shown that our method can effectively parse the semantic meaning from the images with the underlying neural network and accurately delineate the structural boundaries with the reference of low-level contextual cues. Experimental results on the benchmark dataset of 2012 ISBI segmentation challenge of neuronal structures suggest that the proposed method can outperform the state-of-the-art methods by a large margin with respect to different evaluation measurements. Our method can potentially facilitate the automatic connectome analysis from EM images with less human intervention effort.

The number of mitoses per tissue area gives an important aggressiveness indication of the invasive breast carcinoma.However, automatic mitosis detection in histology images remains a challenging problem. Traditional methods either employ hand-crafted features to discriminate mitoses from other cells or construct a pixel-wise classifier to label every pixel in a sliding window way. While the former suffers from the large shape variation of mitoses and the existence of many mimics with similar appearance, the slow speed of the later prohibits its use in clinical practice.In order to overcome these shortcomings, we propose a fast and accurate method to detect mitosis by designing a novel deep cascaded convolutional neural network, which is composed of two components. First, by leveraging the fully convolutional neural network, we propose a coarse retrieval model to identify and locate the candidates of mitosis while preserving a high sensitivity.Based on these candidates, a fine discrimination model utilizing knowledge transferred from cross-domain is developed to further single out mitoses from hard mimics.Our approach outperformed other methods by a large margin in 2014 ICPR MITOS-ATYPIA challenge in terms of detection accuracy. When compared with the state-of-the-art methods on the 2012 ICPR MITOSIS data (a smaller and less challenging dataset), our method achieved comparable or better results with a roughly 60 times faster speed.

We present a discriminative nonparametric latent feature relational model (LFRM) for link prediction to automatically infer the dimensionality of latent features. Under the generic RegBayes (regularized Bayesian inference) framework, we handily incorporate the prediction loss with probabilistic inference of a Bayesian model; set distinct regularization parameters for different types of links to handle the imbalance issue in real networks; and unify the analysis of both the smooth logistic log-loss and the piecewise linear hinge loss. For the nonconjugate posterior inference, we present a simple Gibbs sampler via data augmentation, without making restricting assumptions as done in variational methods. We further develop an approximate sampler using stochastic gradient Langevin dynamics to handle large networks with hundreds of thousands of entities and millions of links, orders of magnitude larger than what existing LFRM models can process. Extensive studies on various real networks show promising performance.

In this paper, we propose a novel model for learning graph representations, which generates a low-dimensional vector representation for each vertex by capturing the graph structural information. Different from other previous research efforts, we adopt a random surfing model to capture graph structural information directly, instead of using the sampling-based method for generating linear sequences proposed by Perozzi et al. (2014). The advantages of our approach will be illustrated from both theorical and empirical perspectives. We also give a new perspective for the matrix factorization method proposed by Levy and Goldberg (2014), in which the pointwise mutual information (PMI) matrix is considered as an analytical solution to the objective function of the skip-gram model with negative sampling proposed by Mikolov et al. (2013). Unlike their approach which involves the use of the SVD for finding the low-dimensitonal projections from the PMI matrix, however, the stacked denoising autoencoder is introduced in our model to extract complex features and model non-linearities. To demonstrate the effectiveness of our model, we conduct experiments on clustering and visualization tasks, employing the learned vertex representations as features. Empirical results on datasets of varying sizes show that our model outperforms other stat-of-the-art models in such tasks.

Vehicle detection in satellite image has attracted extensive research attentions with various emerging applications.However, the detector performance has been significantly degenerated due to the low resolutions of satellite images, as well as the limited training data.In this paper, a robust domain-adaptive vehicle detection framework is proposed to bypass both problems.Our innovation is to transfer the detector learning to the high-resolution aerial image domain,where rich supervision exists and robust detectors can be trained.To this end, we first propose a super-resolution algorithm using coupled dictionary learning to ``augment'' the satellite image region being tested into the aerial domain.Notably, linear detection loss is embedded into the dictionary learning, which enforces the augmented region to be sensitive to the subsequent detector training.Second, to cope with the domain changes, we propose an instance-wised detection using Exemplar Support Vector Machines (E-SVMs), which well handles the intra-class and imaging variations like scales, rotations, and occlusions.With comprehensive experiments on large-scale satellite image collections, we demonstrate that the proposed framework can significantly boost the detection accuracy over several state-of-the-arts.

We have earlier shown that the standard mappings from action languages B and C to logic programs under answer set semantics can be captured by sets of properties on transition systems. In this paper, we consider action language BC and show that a standard mapping from BC action descriptions to logic programs can be similarly captured when the action rules in the descriptions do not have consistency conditions.

Hashing techniques are powerful for approximate nearest neighbour (ANN) search.Existing quantization methods in hashing are all focused on scalar quantization (SQ) which is inferior in utilizing the inherent data distribution.In this paper, we propose a novel vector quantization (VQ) method named affinity preserving quantization (APQ) to improve the quantization quality of projection values, which has significantly boosted the performance of state-of-the-art hashing techniques.In particular, our method incorporates the neighbourhood structure in the pre- and post-projection data space into vector quantization.APQ minimizes the quantization errors of projection values as well as the loss of affinity property of original space.An effective algorithm has been proposed to solve the joint optimization problem in APQ, and the extension to larger binary codes has been resolved by applying product quantization to APQ.Extensive experiments have shown that APQ consistently outperforms the state-of-the-art quantization methods, and has significantly improved the performance of various hashing techniques.

Understanding the dynamics of argumentation frameworks (AFs) is important in the study of argumentation in AI. In this work, we focus on the so-called extension enforcement problem in abstract argumentation. We provide a nearly complete computational complexity map of fixed-argument extension enforcement under various major AF semantics, with results ranging from polynomial-time algorithms to completeness for the second-level of the polynomial hierarchy. Complementing the complexity results, we propose algorithms for NP-hard extension enforcement based on constrained optimization. Going beyond NP, we propose novel counterexample-guided abstraction refinement procedures for the second-level complete problems and present empirical results on a prototype system constituting the first approach to extension enforcement in its generality.

We introduce normalized nonnegative models (NNM) for explorative data analysis. NNMs are partial convexifications of models from probability theory. We demonstrate their value at the example of item recommendation. We show that NNM-based recommender systems satisfy three criteria that all recommender systems should ideally satisfy: high predictive power, computational tractability, and expressive representations of users and items. Expressive user and item representations are important in practice to succinctly summarize the pool of customers and the pool of items. In NNMs, user representations are expressive because each user's preference can be regarded as normalized mixture of preferences of stereotypical users. The interpretability of item and user representations allow us to arrange properties of items (e.g., genres of movies or topics of documents) or users (e.g., personality traits) hierarchically.