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Assertion Detection in Multi-Label Clinical Text using Scope Localization
Ambati, Rajeev Bhatt, Hanifi, Ahmed Ada, Vunikili, Ramya, Sharma, Puneet, Farri, Oladimeji
Multi-label sentences (text) in the clinical domain result from the rich description of scenarios during patient care. The state-of-theart methods for assertion detection mostly address this task in the setting of a single assertion label per sentence (text). In addition, few rules based and deep learning methods perform negation/assertion scope detection on single-label text. It is a significant challenge extending these methods to address multi-label sentences without diminishing performance. Therefore, we developed a convolutional neural network (CNN) architecture to localize multiple labels and their scopes in a single stage end-to-end fashion, and demonstrate that our model performs atleast 12% better than the state-of-the-art on multi-label clinical text.
Time Series to Images: Monitoring the Condition of Industrial Assets with Deep Learning Image Processing Algorithms
Garcia, Gabriel Rodriguez, Michau, Gabriel, Ducoffe, Mรฉlanie, Gupta, Jayant Sen, Fink, Olga
The ability to detect anomalies in time series is considered as highly valuable within plenty of application domains. The sequential nature of time series objects is responsible for an additional feature complexity, ultimately requiring specialized approaches for solving the task. Essential characteristics of time series, laying outside the time domain, are often difficult to capture with state-of-the-art anomaly detection methods, when no transformations on the time series have been applied. Inspired by the success of deep learning methods in computer vision, several studies have proposed to transform time-series into image-like representations, leading to very promising results. However, most of the previous studies implementing time-series to image encodings have focused on the supervised classification. The application to unsupervised anomaly detection tasks has been limited. The paper has the following contributions: First, we evaluate the application of six time-series to image encodings to DL algorithms: Gramian Angular Field, Markov Transition Field, Recurrence Plot, Grey Scale Encoding, Spectrogram and Scalogram. Second, we propose modifications of the original encoding definitions, to make them more robust to the variability in large datasets. And third, we provide a comprehensive comparison between using the raw time series directly and the different encodings, with and without the proposed improvements. The comparison is performed on a dataset collected and released by Airbus, containing highly complex vibration measurements from real helicopters flight tests. The different encodings provide competitive results for anomaly detection.
Distilling Knowledge from Ensembles of Acoustic Models for Joint CTC-Attention End-to-End Speech Recognition
Gao, Yan, Parcollet, Titouan, Lane, Nicholas
Knowledge distillation has been widely used to compress existing deep learning models while preserving the performance on a wide range of applications. In the specific context of Automatic Speech Recognition (ASR), distillation from ensembles of acoustic models has recently shown promising results in increasing recognition performance. In this paper, we propose an extension of multi-teacher distillation methods to joint ctc-atention end-to-end ASR systems. We also introduce two novel distillation strategies. The core intuition behind both is to integrate the error rate metric to the teacher selection rather than solely focusing on the observed losses. This way, we directly distillate and optimize the student toward the relevant metric for speech recognition. We evaluated these strategies under a selection of training procedures on the TIMIT phoneme recognition task and observed promising error rate for these strategies compared to a common baseline. Indeed, the best obtained phoneme error rate of 16.4% represents a state-of-the-art score for end-to-end ASR systems.
Neural Ordinary Differential Equation based Recurrent Neural Network Model
Habiba, Mansura, Pearlmutter, Barak A.
Neural differential equations are a promising new member in the neural network family. They show the potential of differential equations for time series data analysis. In this paper, the strength of the ordinary differential equation (ODE) is explored with a new extension. The main goal of this work is to answer the following questions: (i)~can ODE be used to redefine the existing neural network model? (ii)~can Neural ODEs solve the irregular sampling rate challenge of existing neural network models for a continuous time series, i.e., length and dynamic nature, (iii)~how to reduce the training and evaluation time of existing Neural ODE systems? This work leverages the mathematical foundation of ODEs to redesign traditional RNNs such as Long Short-Term Memory (LSTM) and Gated Recurrent Unit (GRU). The main contribution of this paper is to illustrate the design of two new ODE-based RNN models (GRU-ODE model and LSTM-ODE) which can compute the hidden state and cell state at any point of time using an ODE solver. These models reduce the computation overhead of hidden state and cell state by a vast amount. The performance evaluation of these two new models for learning continuous time series with irregular sampling rate is then demonstrated. Experiments show that these new ODE based RNN models require less training time than Latent ODEs and conventional Neural ODEs. They can achieve higher accuracy quickly, and the design of the neural network is simpler than, previous neural ODE systems.
Normalized Attention Without Probability Cage
Richter, Oliver, Wattenhofer, Roger
Attention architectures are widely used; they recently gained renewed popularity with Transformers yielding a streak of state of the art results. Yet, the geometrical implications of softmax-attention remain largely unexplored. In this work we highlight the limitations of constraining attention weights to the probability simplex and the resulting convex hull of value vectors. We show that Transformers are sequence length dependent biased towards token isolation at initialization and contrast Transformers to simple max- and sum-pooling - two strong baselines rarely reported. We propose to replace the softmax in self-attention with normalization, yielding a hyperparameter and data-bias robust, generally applicable architecture. We support our insights with empirical results from more than 25,000 trained models. All results and implementations are made available.
Inference on the Change Point in High Dimensional Dynamic Graphical Models
Kaul, Abhishek, Zhang, Hongjin, Tsampourakis, Konstantinos
We propose a new estimator for the change point parameter in a dynamic high dimensional graphical model setting. We show that the proposed estimator retains sufficient adaptivity against plugin estimates of the edge structure of the underlying graphical models, in order to yield an $O(\psi^{-2})$ rate of convergence of the change point estimator in the integer scale. This rate is preserved while allowing high dimensionality as well as a diminishing jump size $\psi,$ provided $s\log^{3/2}(p\vee T)=o\big(\surd(Tl_T)\big).$ Here $s,p,T$ and $l_T$ represent a sparsity parameter, model dimension, sampling period and the separation of the change point from its parametric boundary, respectively. Moreover, since the rate of convergence is free of $s,p$ and logarithmic terms of $T,$ it allows the existence of a limiting distribution valid in the high dimensional setting, which is then derived. The method does not assume an underlying Gaussian distribution. Theoretical results are supported numerically with monte carlo simulations.
A Novel Fusion of Attention and Sequence to Sequence Autoencoders to Predict Sleepiness From Speech
Amiriparian, Shahin, Winokurow, Pawel, Karas, Vincent, Ottl, Sandra, Gerczuk, Maurice, Schuller, Bjรถrn W.
Motivated by the attention mechanism of the human visual system and recent developments in the field of machine translation, we introduce our attention-based and recurrent sequence to sequence autoencoders for fully unsupervised representation learning from audio files. In particular, we test the efficacy of our novel approach on the task of speech-based sleepiness recognition. We evaluate the learnt representations from both autoencoders, and then conduct an early fusion to ascertain possible complementarity between them. In our frameworks, we first extract Mel-spectrograms from raw audio files. Second, we train recurrent autoencoders on these spectrograms which are considered as time-dependent frequency vectors. Afterwards, we extract the activations of specific fully connected layers of the autoencoders which represent the learnt features of spectrograms for the corresponding audio instances. Finally, we train support vector regressors on these representations to obtain the predictions. On the development partition of the data, we achieve Spearman's correlation coefficients of .324, .283, and .320 with the targets on the Karolinska Sleepiness Scale by utilising attention and non-attention autoencoders, and the fusion of both autoencoders' representations, respectively. In the same order, we achieve .311, .359, and .367 Spearman's correlation coefficients on the test data, indicating the suitability of our proposed fusion strategy.
Two-Dimensional Semi-Nonnegative Matrix Factorization for Clustering
Peng, Chong, Zhang, Zhilu, Kang, Zhao, Chen, Chenglizhao, Cheng, Qiang
In this paper, we propose a new Semi-Nonnegative Matrix Factorization method for 2-dimensional (2D) data, named TS-NMF. It overcomes the drawback of existing methods that seriously damage the spatial information of the data by converting 2D data to vectors in a preprocessing step. In particular, projection matrices are sought under the guidance of building new data representations, such that the spatial information is retained and projections are enhanced by the goal of clustering, which helps construct optimal projection directions. Moreover, to exploit nonlinear structures of the data, manifold is constructed in the projected subspace, which is adaptively updated according to the projections and less afflicted with noise and outliers of the data and thus more representative in the projected space. Hence, seeking projections, building new data representations, and learning manifold are seamlessly integrated in a single model, which mutually enhance other and lead to a powerful data representation. Comprehensive experimental results verify the effectiveness of TS-NMF in comparison with several state-of-the-art algorithms, which suggests high potential of the proposed method for real world applications.
Quaternion Neural Networks for Multi-channel Distant Speech Recognition
Qiu, Xinchi, Parcollet, Titouan, Ravanelli, Mirco, Lane, Nicholas, Morchid, Mohamed
Despite the significant progress in automatic speech recognition (ASR), distant ASR remains challenging due to noise and reverberation. A common approach to mitigate this issue consists of equipping the recording devices with multiple microphones that capture the acoustic scene from different perspectives. These multi-channel audio recordings contain specific internal relations between each signal. In this paper, we propose to capture these inter- and intra- structural dependencies with quaternion neural networks, which can jointly process multiple signals as whole quaternion entities. The quaternion algebra replaces the standard dot product with the Hamilton one, thus offering a simple and elegant way to model dependencies between elements. The quaternion layers are then coupled with a recurrent neural network, which can learn long-term dependencies in the time domain. We show that a quaternion long-short term memory neural network (QLSTM), trained on the concatenated multi-channel speech signals, outperforms equivalent real-valued LSTM on two different tasks of multi-channel distant speech recognition.
Continuous LWE
Bruna, Joan, Regev, Oded, Song, Min Jae, Tang, Yi
We introduce a continuous analogue of the Learning with Errors (LWE) problem, which we name CLWE. We give a polynomial-time quantum reduction from worst-case lattice problems to CLWE, showing that CLWE enjoys similar hardness guarantees to those of LWE. Alternatively, our result can also be seen as opening new avenues of (quantum) attacks on lattice problems. Our work resolves an open problem regarding the computational complexity of learning mixtures of Gaussians without separability assumptions (Diakonikolas 2016, Moitra 2018). As an additional motivation, (a slight variant of) CLWE was considered in the context of robust machine learning (Diakonikolas et al.~FOCS 2017), where hardness in the statistical query (SQ) model was shown; our work addresses the open question regarding its computational hardness (Bubeck et al.~ICML 2019).