Principal geodesic analysis (PGA) is a generalization of principal component analysis (PCA) for dimensionality reduction of data on a Riemannian manifold. Currently PGA is defined as a geometric fit to the data, rather than as a probabilistic model. Inspired by probabilistic PCA, we present a latent variable model for PGA that provides a probabilistic framework for factor analysis on manifolds. To compute maximum likelihood estimates of the parameters in our model, we develop a Monte Carlo Expectation Maximization algorithm, where the expectation is approximated by Hamiltonian Monte Carlo sampling of the latent variables. We demonstrate the ability of our method to recover the ground truth parameters in simulated sphere data, as well as its effectiveness in analyzing shape variability of a corpus callosum data set from human brain images.

Distributions over matrices with exchangeable rows and infinitely many columns are useful in constructing nonparametric latent variable models. However, the distribution impliedby such models over the number of features exhibited by each data point may be poorly-suited for many modeling tasks. In this paper, we propose aclass of exchangeable nonparametric priors obtained by restricting the domain ofexisting models. Such models allow us to specify the distribution over the number of features per data point, and can achieve better performance on data sets where the number of features is not well-modeled by the original distribution.

We address the scalability of symbolic planning under uncertainty with factored states and actions. Prior work has focused almost exclusively on factored states but not factored actions, and on value iteration (VI) compared to policy iteration (PI). Our first contribution is a novel method for symbolic policy backups via the application of constraints, which is used to yield a new efficient symbolic imple- mentation of modified PI (MPI) for factored action spaces. While this approach improves scalability in some cases, naive handling of policy constraints comes with its own scalability issues. This leads to our second and main contribution, symbolic Opportunistic Policy Iteration (OPI), which is a novel convergent al- gorithm lying between VI and MPI. The core idea is a symbolic procedure that applies policy constraints only when they reduce the space and time complexity of the update, and otherwise performs full Bellman backups, thus automatically adjusting the backup per state. We also give a memory bounded version of this algorithm allowing a space-time tradeoff. Empirical results show significantly improved scalability over the state-of-the-art.

We propose a family of maximum mean discrepancy (MMD) kernel two-sample tests that have low sample complexity and are consistent. The test has a hyperparameter that allows one to control the tradeoff between sample complexity and computational time. Our family of tests, which we denote as B-tests, is both computationally and statistically efficient, combining favorable properties of previously proposed MMD two-sample tests. It does so by better leveraging samples to produce low variance estimates in the finite sample case, while avoiding a quadratic number of kernel evaluations and complex null-hypothesis approximation as would be required by tests relying on one sample U-statistics. The B-test uses a smaller than quadratic number of kernel evaluations and avoids completely the computational burden of complex null-hypothesis approximation while maintaining consistency and probabilistically conservative thresholds on Type I error. Finally, recent results of combining multiple kernels transfer seamlessly to our hypothesis test, allowing a further increase in discriminative power and decrease in sample complexity.

The receptive field (RF) of a sensory neuron describes how the neuron integrates sensory stimuli over time and space. In typical experiments with naturalistic or flickering spatiotemporal stimuli, RFs are very high-dimensional, due to the large number of coefficients needed to specify an integration profile across time and space. Estimating these coefficients from small amounts of data poses a variety of challenging statistical and computational problems. Here we address these challenges by developing Bayesian reduced rank regression methods for RF estimation. This corresponds to modeling the RF as a sum of several space-time separable (i.e., rank-1) filters, which proves accurate even for neurons with strongly oriented space-time RFs. This approach substantially reduces the number of parameters needed to specify the RF, from 1K-100K down to mere 100s in the examples we consider, and confers substantial benefits in statistical power and computational efficiency. In particular, we introduce a novel prior over low-rank RFs using the restriction of a matrix normal prior to the manifold of low-rank matrices. We then use a localized'' prior over row and column covariances to obtain sparse, smooth, localized estimates of the spatial and temporal RF components. We develop two methods for inference in the resulting hierarchical model: (1) a fully Bayesian method using blocked-Gibbs sampling; and (2) a fast, approximate method that employs alternating coordinate ascent of the conditional marginal likelihood. We develop these methods under Gaussian and Poisson noise models, and show that low-rank estimates substantially outperform full rank estimates in accuracy and speed using neural data from retina and V1."

We consider the problem of sampling from a probability distribution defined over a high-dimensional discrete set, specified for instance by a graphical model. We propose a sampling algorithm, called PAWS, based on embedding the set into a higher-dimensional space which is then randomly projected using universal hash functions to a lower-dimensional subspace and explored using combinatorial search methods. Our scheme can leverage fast combinatorial optimization tools as a blackbox and, unlike MCMC methods, samples produced are guaranteed to be within an (arbitrarily small) constant factor of the true probability distribution. We demonstrate that by using state-of-the-art combinatorial search tools, PAWS can efficiently sample from Ising grids with strong interactions and from software verification instances, while MCMC and variational methods fail in both cases.

Learning dynamic models from observed data has been a central issue in many scientific studies or engineering tasks. The usual setting is that data are collected sequentially from trajectories of some dynamical system operation. In quite a few modern scientific modeling tasks, however, it turns out that reliable sequential data are rather difficult to gather, whereas out-of-order snapshots are much easier to obtain. Examples include the modeling of galaxies, chronic diseases such Alzheimer's, or certain biological processes. Existing methods for learning dynamic model from non-sequence data are mostly based on Expectation-Maximization, which involves non-convex optimization and is thus hard to analyze. Inspired by recent advances in spectral learning methods, we propose to study this problem from a different perspective: moment matching and spectral decomposition. Under that framework, we identify reasonable assumptions on the generative process of non-sequence data, and propose learning algorithms based on the tensor decomposition method \cite{anandkumar2012tensor} to \textit{provably} recover first-order Markov models and hidden Markov models. To the best of our knowledge, this is the first formal guarantee on learning from non-sequence data. Preliminary simulation results confirm our theoretical findings.

Lasso is a widely used regression technique to find sparse representations. When the dimension of the feature space and the number of samples are extremely large, solving the Lasso problem remains challenging. To improve the efficiency of solving large-scale Lasso problems, El Ghaoui and his colleagues have proposed the SAFE rules which are able to quickly identify the inactive predictors, i.e., predictors that have $0$ components in the solution vector. Then, the inactive predictors or features can be removed from the optimization problem to reduce its scale. By transforming the standard Lasso to its dual form, it can be shown that the inactive predictors include the set of inactive constraints on the optimal dual solution. In this paper, we propose an efficient and effective screening rule via Dual Polytope Projections (DPP), which is mainly based on the uniqueness and nonexpansiveness of the optimal dual solution due to the fact that the feasible set in the dual space is a convex and closed polytope. Moreover, we show that our screening rule can be extended to identify inactive groups in group Lasso. To the best of our knowledge, there is currently no exact" screening rule for group Lasso. We have evaluated our screening rule using many real data sets. Results show that our rule is more effective to identify inactive predictors than existing state-of-the-art screening rules for Lasso."

In many practical applications of active learning, it is more cost-effective to request labels in large batches, rather than one-at-a-time. This is because the cost of labeling a large batch of examples at once is often sublinear in the number of examples in the batch. In this work, we study the label complexity of active learning algorithms that request labels in a given number of batches, as well as the tradeoff between the total number of queries and the number of rounds allowed. We additionally study the total cost sufficient for learning, for an abstract notion of the cost of requesting the labels of a given number of examples at once. In particular, we find that for sublinear cost functions, it is often desirable to request labels in large batches (i.e., buying in bulk); although this may increase the total number of labels requested, it reduces the total cost required for learning.

We propose a general formalism of iterated random functions with semigroup property, under which exact and approximate Bayesian posterior updates can be viewed as specific instances. A convergence theory for iterated random functions is presented. As an application of the general theory we analyze convergence behaviors of exact and approximate message-passing algorithms that arise in a sequential change point detection problem formulated via a latent variable directed graphical model. The sequential inference algorithm and its supporting theory are illustrated by simulated examples.