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Improved Off-policy Reinforcement Learning in Biological Sequence Design

arXiv.org Artificial Intelligence

Designing biological sequences with desired properties is a significant challenge due to the combinatorially vast search space and the high cost of evaluating each candidate sequence. To address these challenges, reinforcement learning (RL) methods, such as GFlowNets, utilize proxy models for rapid reward evaluation and annotated data for policy training. Although these approaches have shown promise in generating diverse and novel sequences, the limited training data relative to the vast search space often leads to the misspecification of proxy for out-of-distribution inputs. We introduce $\delta$-Conservative Search, a novel off-policy search method for training GFlowNets designed to improve robustness against proxy misspecification. The key idea is to incorporate conservativeness, controlled by parameter $\delta$, to constrain the search to reliable regions. Specifically, we inject noise into high-score offline sequences by randomly masking tokens with a Bernoulli distribution of parameter $\delta$ and then denoise masked tokens using the GFlowNet policy. Additionally, $\delta$ is adaptively adjusted based on the uncertainty of the proxy model for each data point. This enables the reflection of proxy uncertainty to determine the level of conservativeness. Experimental results demonstrate that our method consistently outperforms existing machine learning methods in discovering high-score sequences across diverse tasks-including DNA, RNA, protein, and peptide design-especially in large-scale scenarios.


Empowering Backbone Models for Visual Text Generation with Input Granularity Control and Glyph-Aware Training

arXiv.org Artificial Intelligence

Diffusion-based text-to-image models have demonstrated impressive achievements in diversity and aesthetics but struggle to generate images with legible visual texts. Existing backbone models have limitations such as misspelling, failing to generate texts, and lack of support for Chinese text, but their development shows promising potential. In this paper, we propose a series of methods, aiming to empower backbone models to generate visual texts in English and Chinese. We first conduct a preliminary study revealing that Byte Pair Encoding (BPE) tokenization and the insufficient learning of cross-attention modules restrict the performance of the backbone models. Based on these observations, we make the following improvements: (1) We design a mixed granularity input strategy to provide more suitable text representations; (2) We propose to augment the conventional training objective with three glyph-aware training losses, which enhance the learning of cross-attention modules and encourage the model to focus on visual texts. Through experiments, we demonstrate that our methods can effectively empower backbone models to generate semantic relevant, aesthetically appealing, and accurate visual text images, while maintaining their fundamental image generation quality.


CiMaTe: Citation Count Prediction Effectively Leveraging the Main Text

arXiv.org Artificial Intelligence

Prediction of the future citation counts of papers is increasingly important to find interesting papers among an ever-growing number of papers. Although a paper's main text is an important factor for citation count prediction, it is difficult to handle in machine learning models because the main text is typically very long; thus previous studies have not fully explored how to leverage it. In this paper, we propose a BERT-based citation count prediction model, called CiMaTe, that leverages the main text by explicitly capturing a paper's sectional structure. Through experiments with papers from computational linguistics and biology domains, we demonstrate the CiMaTe's effectiveness, outperforming the previous methods in Spearman's rank correlation coefficient; 5.1 points in the computational linguistics domain and 1.8 points in the biology domain.


Data Distribution Valuation

arXiv.org Artificial Intelligence

Data valuation is a class of techniques for quantitatively assessing the value of data for applications like pricing in data marketplaces. Existing data valuation methods define a value for a discrete dataset. However, in many use cases, users are interested in not only the value of the dataset, but that of the distribution from which the dataset was sampled. For example, consider a buyer trying to evaluate whether to purchase data from different vendors. The buyer may observe (and compare) only a small preview sample from each vendor, to decide which vendor's data distribution is most useful to the buyer and purchase. The core question is how should we compare the values of data distributions from their samples? Under a Huber characterization of the data heterogeneity across vendors, we propose a maximum mean discrepancy (MMD)-based valuation method which enables theoretically principled and actionable policies for comparing data distributions from samples. We empirically demonstrate that our method is sample-efficient and effective in identifying valuable data distributions against several existing baselines, on multiple real-world datasets (e.g., network intrusion detection, credit card fraud detection) and downstream applications (classification, regression).


Real-World Cooking Robot System from Recipes Based on Food State Recognition Using Foundation Models and PDDL

arXiv.org Artificial Intelligence

Although there is a growing demand for cooking behaviours as one of the expected tasks for robots, a series of cooking behaviours based on new recipe descriptions by robots in the real world has not yet been realised. In this study, we propose a robot system that integrates real-world executable robot cooking behaviour planning using the Large Language Model (LLM) and classical planning of PDDL descriptions, and food ingredient state recognition learning from a small number of data using the Vision-Language model (VLM). We succeeded in experiments in which PR2, a dual-armed wheeled robot, performed cooking from arranged new recipes in a real-world environment, and confirmed the effectiveness of the proposed system.


Neural Fourier Modelling: A Highly Compact Approach to Time-Series Analysis

arXiv.org Machine Learning

Neural time-series analysis has traditionally focused on modeling data in the time domain, often with some approaches incorporating equivalent Fourier domain representations as auxiliary spectral features. In this work, we shift the main focus to frequency representations, modeling time-series data fully and directly in the Fourier domain. We introduce Neural Fourier Modelling (NFM), a compact yet powerful solution for time-series analysis. NFM is grounded in two key properties of the Fourier transform (FT): (i) the ability to model finite-length time series as functions in the Fourier domain, treating them as continuous-time elements in function space, and (ii) the capacity for data manipulation (such as resampling and timespan extension) within the Fourier domain. We reinterpret Fourier-domain data manipulation as frequency extrapolation and interpolation, incorporating this as a core learning mechanism in NFM, applicable across various tasks. To support flexible frequency extension with spectral priors and effective modulation of frequency representations, we propose two learning modules: Learnable Frequency Tokens (LFT) and Implicit Neural Fourier Filters (INFF). These modules enable compact and expressive modeling in the Fourier domain. Extensive experiments demonstrate that NFM achieves state-of-the-art performance on a wide range of tasks (forecasting, anomaly detection, and classification), including challenging time-series scenarios with previously unseen sampling rates at test time. Moreover, NFM is highly compact, requiring fewer than 40K parameters in each task, with time-series lengths ranging from 100 to 16K.


The FBI Still Hasn't Cracked NYC Mayor Eric Adams' Phone

WIRED

Pig butchering, the crypto-based scammer scourge that has pulled in an estimated 75 billion from victims globally, is spreading beyond its roots in Southeast Asia, with operations proliferating across the Middle East, Eastern Europe, Latin America, and West Africa. The UK's National Crime Agency disclosed new details about the identities of the Russian ransomware group known as Evil Corp--as well as the group's ties to Russian intelligence agencies and even its direct participation in espionage operations targeting NATO allies. A WIRED investigation revealed how car-mounted automatic license plate reader cameras are capturing far more than just license plates, including campaign yard signs, bumper stickers, and other politically sensitive text, all examples of how a system for tracking vehicles threatens to become a broader surveillance tool. In other news, ICE signed a 2 million contract with Paragon Solutions, a known vendor of spyware including the hacking tool Graphite. And the Pentagon is increasingly adopting handheld controllers for weapons systems in an effort provide more intuitive interfaces to soldiers who have grown up playing Xbox and PlayStation consoles.


Transformers Utilization in Chart Understanding: A Review of Recent Advances & Future Trends

arXiv.org Artificial Intelligence

In recent years, interest in vision-language tasks has grown, especially those involving chart interactions. These tasks are inherently multimodal, requiring models to process chart images, accompanying text, underlying data tables, and often user queries. Traditionally, Chart Understanding (CU) relied on heuristics and rule-based systems. However, recent advancements that have integrated transformer architectures significantly improved performance. This paper reviews prominent research in CU, focusing on State-of-The-Art (SoTA) frameworks that employ transformers within End-to-End (E2E) solutions. Relevant benchmarking datasets and evaluation techniques are analyzed. Additionally, this article identifies key challenges and outlines promising future directions for advancing CU solutions. Following the PRISMA guidelines, a comprehensive literature search is conducted across Google Scholar, focusing on publications from Jan'20 to Jun'24. After rigorous screening and quality assessment, 32 studies are selected for in-depth analysis. The CU tasks are categorized into a three-layered paradigm based on the cognitive task required. Recent advancements in the frameworks addressing various CU tasks are also reviewed. Frameworks are categorized into single-task or multi-task based on the number of tasks solvable by the E2E solution. Within multi-task frameworks, pre-trained and prompt-engineering-based techniques are explored. This review overviews leading architectures, datasets, and pre-training tasks. Despite significant progress, challenges remain in OCR dependency, handling low-resolution images, and enhancing visual reasoning. Future directions include addressing these challenges, developing robust benchmarks, and optimizing model efficiency. Additionally, integrating explainable AI techniques and exploring the balance between real and synthetic data are crucial for advancing CU research.


Persona Knowledge-Aligned Prompt Tuning Method for Online Debate

arXiv.org Artificial Intelligence

Debate is the process of exchanging viewpoints or convincing others on a particular issue. Recent research has provided empirical evidence that the persuasiveness of an argument is determined not only by language usage but also by communicator characteristics. Researchers have paid much attention to aspects of languages, such as linguistic features and discourse structures, but combining argument persuasiveness and impact with the social personae of the audience has not been explored due to the difficulty and complexity. We have observed the impressive simulation and personification capability of ChatGPT, indicating a giant pre-trained language model may function as an individual to provide personae and exert unique influences based on diverse background knowledge. Therefore, we propose a persona knowledge-aligned framework for argument quality assessment tasks from the audience side. This is the first work that leverages the emergence of ChatGPT and injects such audience personae knowledge into smaller language models via prompt tuning. The performance of our pipeline demonstrates significant and consistent improvement compared to competitive architectures.


Self-Supervised Anomaly Detection in the Wild: Favor Joint Embeddings Methods

arXiv.org Artificial Intelligence

Accurate anomaly detection is critical in vision-based infrastructure inspection, where it helps prevent costly failures and enhances safety. Self-Supervised Learning (SSL) offers a promising approach by learning robust representations from unlabeled data. However, its application in anomaly detection remains underexplored. This paper addresses this gap by providing a comprehensive evaluation of SSL methods for real-world anomaly detection, focusing on sewer infrastructure. Using the Sewer-ML dataset, we evaluate lightweight models such as ViT-Tiny and ResNet-18 across SSL frameworks, including BYOL, Barlow Twins, SimCLR, DINO, and MAE, under varying class imbalance levels. Through 250 experiments, we rigorously assess the performance of these SSL methods to ensure a robust and comprehensive evaluation. Our findings highlight the superiority of joint-embedding methods like SimCLR and Barlow Twins over reconstruction-based approaches such as MAE, which struggle to maintain performance under class imbalance. Furthermore, we find that the SSL model choice is more critical than the backbone architecture. Additionally, we emphasize the need for better label-free assessments of SSL representations, as current methods like RankMe fail to adequately evaluate representation quality, making cross-validation without labels infeasible. Despite the remaining performance gap between SSL and supervised models, these findings highlight the potential of SSL to enhance anomaly detection, paving the way for further research in this underexplored area of SSL applications.