South America
Early Detection of Ovarian Cancer by Wavelet Analysis of Protein Mass Spectra
Vimalajeewa, Dixon, Bruce, Scott Alan, Vidakovic, Brani
Accurate and efficient detection of ovarian cancer at early stages is critical to ensure proper treatments for patients. Among the first-line modalities investigated in studies of early diagnosis are features distilled from protein mass spectra. This method, however, considers only a specific subset of spectral responses and ignores the interplay among protein expression levels, which can also contain diagnostic information. We propose a new modality that automatically searches protein mass spectra for discriminatory features by considering the self-similar nature of the spectra. Self-similarity is assessed by taking a wavelet decomposition of protein mass spectra and estimating the rate of level-wise decay in the energies of the resulting wavelet coefficients. Level-wise energies are estimated in a robust manner using distance variance, and rates are estimated locally via a rolling window approach. This results in a collection of rates that can be used to characterize the interplay among proteins, which can be indicative of cancer presence. Discriminatory descriptors are then selected from these evolutionary rates and used as classifying features. The proposed wavelet-based features are used in conjunction with features proposed in the existing literature for early stage diagnosis of ovarian cancer using two datasets published by the American National Cancer Institute. Including the wavelet-based features from the new modality results in improvements in diagnostic performance for early-stage ovarian cancer detection. This demonstrates the ability of the proposed modality to characterize new ovarian cancer diagnostic information.
Artificial Intelligence (AI) Robots Market to Reach USD 66,662 Million by 2030 Driven By the Demand for Industrial Robots Exclusive Report by Acumen Research and Consulting
TOKYO, July 12, 2022 (GLOBE NEWSWIRE) -- The Global Artificial Intelligence Robots Market size was valued at USD 6,214 Million in 2021 and is expected to reach USD 66,662 Million by 2030 growing at a CAGR of 30.5% during the forecast period from 2022 to 2030. Human-robot interaction is becoming more common as robots make everyone's lives easier and more comfortable, and as a result, the market for AI robots is expanding. AI, or machine intelligence in robotic systems, is the implementation of AI technology into robots to allow them to perform repetitive tasks more efficiently without human intervention. AI also enables robots to communicate with other autonomous systems. For entrepreneurs, robotic systems will prove to be more effective and cost-effective labor.
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N-Grammer: Augmenting Transformers with latent n-grams
Roy, Aurko, Anil, Rohan, Lai, Guangda, Lee, Benjamin, Zhao, Jeffrey, Zhang, Shuyuan, Wang, Shibo, Zhang, Ye, Wu, Shen, Swavely, Rigel, Tao, null, Yu, null, Dao, Phuong, Fifty, Christopher, Chen, Zhifeng, Wu, Yonghui
Transformer models have recently emerged as one of the foundational models in natural language processing, and as a byproduct, there is significant recent interest and investment in scaling these models. However, the training and inference costs of these large Transformer language models are prohibitive, thus necessitating more research in identifying more efficient variants. In this work, we propose a simple yet effective modification to the Transformer architecture inspired by the literature in statistical language modeling, by augmenting the model with n-grams that are constructed from a discrete latent representation of the text sequence. We evaluate our model, the N-Grammer on language modeling on the C4 data-set as well as text classification on the SuperGLUE data-set, and find that it outperforms several strong baselines such as the Transformer and the Primer. We open-source our model for reproducibility purposes in Jax.
Re2G: Retrieve, Rerank, Generate
Glass, Michael, Rossiello, Gaetano, Chowdhury, Md Faisal Mahbub, Naik, Ankita Rajaram, Cai, Pengshan, Gliozzo, Alfio
As demonstrated by GPT-3 and T5, transformers grow in capability as parameter spaces become larger and larger. However, for tasks that require a large amount of knowledge, non-parametric memory allows models to grow dramatically with a sub-linear increase in computational cost and GPU memory requirements. Recent models such as RAG and REALM have introduced retrieval into conditional generation. These models incorporate neural initial retrieval from a corpus of passages. We build on this line of research, proposing Re2G, which combines both neural initial retrieval and reranking into a BART-based sequence-to-sequence generation. Our reranking approach also permits merging retrieval results from sources with incomparable scores, enabling an ensemble of BM25 and neural initial retrieval. To train our system end-to-end, we introduce a novel variation of knowledge distillation to train the initial retrieval, reranker, and generation using only ground truth on the target sequence output. We find large gains in four diverse tasks: zero-shot slot filling, question answering, fact-checking, and dialog, with relative gains of 9% to 34% over the previous state-of-the-art on the KILT leaderboard. We make our code available as open source at https://github.com/IBM/kgi-slot-filling/tree/re2g.
LudVision -- Remote Detection of Exotic Invasive Aquatic Floral Species using Drone-Mounted Multispectral Data
Abreu, António J., Alexandre, Luís A., Santos, João A., Basso, Filippo
Remote sensing is the process of detecting and monitoring the physical characteristics of an area by measuring its reflected and emitted radiation at a distance. It is being broadly used to monitor ecosystems, mainly for their preservation. Ever-growing reports of invasive species have affected the natural balance of ecosystems. Exotic invasive species have a critical impact when introduced into new ecosystems and may lead to the extinction of native species. In this study, we focus on Ludwigia peploides, considered by the European Union as an aquatic invasive species. Its presence can negatively impact the surrounding ecosystem and human activities such as agriculture, fishing, and navigation. Our goal was to develop a method to identify the presence of the species. We used images collected by a drone-mounted multispectral sensor to achieve this, creating our LudVision data set. To identify the targeted species on the collected images, we propose a new method for detecting Ludwigia p. in multispectral images. The method is based on existing state-of-the-art semantic segmentation methods modified to handle multispectral data. The proposed method achieved a producer's accuracy of 79.9% and a user's accuracy of 95.5%.
QT-Routenet: Improved GNN generalization to larger 5G networks by fine-tuning predictions from queueing theory
Afonso, Bruno Klaus de Aquino, Berton, Lilian
In order to promote the use of machine learning in 5G, the International Telecommunication Union (ITU) proposed in 2021 the second edition of the ITU AI/ML in 5G challenge, with over 1600 participants from 82 countries. This work details the second place solution overall, which is also the winning solution of the Graph Neural Networking Challenge 2021. We tackle the problem of generalization when applying a model to a 5G network that may have longer paths and larger link capacities than the ones observed in training. To achieve this, we propose to first extract robust features related to Queueing Theory (QT), and then fine-tune the analytical baseline prediction using a modification of the Routenet Graph Neural Network (GNN) model. The proposed solution generalizes much better than simply using Routenet, and manages to reduce the analytical baseline's 10.42 mean absolute percent error to 1.45 (1.27 with an ensemble). This suggests that making small changes to an approximate model that is known to be robust can be an effective way to improve accuracy without compromising generalization.
FRUIT: Faithfully Reflecting Updated Information in Text
Logan, Robert L. IV, Passos, Alexandre, Singh, Sameer, Chang, Ming-Wei
Textual knowledge bases such as Wikipedia require considerable effort to keep up to date and consistent. While automated writing assistants could potentially ease this burden, the problem of suggesting edits grounded in external knowledge has been under-explored. In this paper, we introduce the novel generation task of *faithfully reflecting updated information in text* (FRUIT) where the goal is to update an existing article given new evidence. We release the FRUIT-WIKI dataset, a collection of over 170K distantly supervised data produced from pairs of Wikipedia snapshots, along with our data generation pipeline and a gold evaluation set of 914 instances whose edits are guaranteed to be supported by the evidence. We provide benchmark results for popular generation systems as well as EDIT5 -- a T5-based approach tailored to editing we introduce that establishes the state of the art. Our analysis shows that developing models that can update articles faithfully requires new capabilities for neural generation models, and opens doors to many new applications.
A Causal Approach for Business Optimization: Application on an Online Marketplace
Parush, Naama, Levinkron-Fisch, Ohad, Shteingart, Hanan, Sela, Amir Bar, Zilberman, Amir, Klein, Jake
A common sales strategy involves having account executives (AEs) actively reach out and contact potential customers. However, not all contact attempts have a positive effect: some attempts do not change customer decisions, while others might even interfere with the desired outcome. In this work we propose using causal inference to estimate the effect of contacting each potential customer and setting the contact policy accordingly. We demonstrate this approach on data from Worthy, an online jewelry marketplace. We examined the Worthy business process to identify relevant decisions and outcomes, and formalized assumptions on how they were made. Using causal tools, we selected a decision point where improving AE contact activity appeared to be promising. We then generated a personalized policy and recommended reaching out only to customers for whom it would be beneficial. Finally, we validated the results in an A\B test over a 3-month period, resulting in an increase in item delivery rate of the targeted population by 22% (p-value=0.026). This policy is now being used on an ongoing basis.
Hierarchy exploitation to detect missing annotations on hierarchical multi-label classification
Romero, Miguel, Nakano, Felipe Kenji, Finke, Jorge, Rocha, Camilo, Vens, Celine
The availability of genomic data has grown exponentially in the last decade, mainly due to the development of new sequencing technologies. Based on the interactions between genes (and gene products) extracted from the increasing genomic data, numerous studies have focused on the identification of associations between genes and functions. While these studies have shown great promise, the problem of annotating genes with functions remains an open challenge. In this work, we present a method to detect missing annotations in hierarchical multi-label classification datasets. We propose a method that exploits the class hierarchy by computing aggregated probabilities to the paths of classes from the leaves to the root for each instance. The proposed method is presented in the context of predicting missing gene function annotations, where these aggregated probabilities are further used to select a set of annotations to be verified through in vivo experiments. The experiments on Oriza sativa Japonica, a variety of rice, showcase that incorporating the hierarchy of classes into the method often improves the predictive performance and our proposed method yields superior results when compared to competitor methods from the literature. Genomic data has become exponentially available in the last decade, mainly due to the development of new technologies, including gene expression profiling generated with RNA sequencing (Ranganathan, Gribskov, Nakai and Schönbach, 2019). Based on the interactions between genes (and gene products) extracted from the increasing genomic data, numerous studies have focused on the identification of associations between genes and functions (Rust, Mongin and Birney, 2002; Vandepoele, Quimbaya, Casneuf, De Veylder and Van de Peer, 2009; van Dam, Võsa, van der Graaf, Franke and de Magalhães, 2017).