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Data Governance in the Age of Large-Scale Data-Driven Language Technology

arXiv.org Artificial Intelligence

The recent emergence and adoption of Machine Learning technology, and specifically of Large Language Models, has drawn attention to the need for systematic and transparent management of language data. This work proposes an approach to global language data governance that attempts to organize data management amongst stakeholders, values, and rights. Our proposal is informed by prior work on distributed governance that accounts for human values and grounded by an international research collaboration that brings together researchers and practitioners from 60 countries. The framework we present is a multi-party international governance structure focused on language data, and incorporating technical and organizational tools needed to support its work.


Fast and efficient speech enhancement with variational autoencoders

arXiv.org Artificial Intelligence

Unsupervised speech enhancement based on variational autoencoders has shown promising performance compared with the commonly used supervised methods. This approach involves the use of a pre-trained deep speech prior along with a parametric noise model, where the noise parameters are learned from the noisy speech signal with an expectationmaximization (EM)-based method. The E-step involves an intractable latent posterior distribution. Existing algorithms to solve this step are either based on computationally heavy Monte Carlo Markov Chain sampling methods and variational inference, or inefficient optimization-based methods. In this paper, we propose a new approach based on Langevin dynamics that generates multiple sequences of samples and comes with a total variation-based regularization to incorporate temporal correlations of latent vectors. Our experiments demonstrate that the developed framework makes an effective compromise between computational efficiency and enhancement quality, and outperforms existing methods.


COVID-19 detection using chest X-rays: is lung segmentation important for generalization?

arXiv.org Artificial Intelligence

Purpose: we evaluated the generalization capability of deep neural networks (DNNs), trained to classify chest X-rays as Covid-19, normal or pneumonia, using a relatively small and mixed dataset. Methods: we proposed a DNN to perform lung segmentation and classification, stacking a segmentation module (U-Net), an original intermediate module and a classification module (DenseNet201). To evaluate generalization, we tested the DNN with an external dataset (from distinct localities) and used Bayesian inference to estimate probability distributions of performance metrics. Results: our DNN achieved 0.917 AUC on the external test dataset, and a DenseNet without segmentation, 0.906. Bayesian inference indicated mean accuracy of 76.1% and [0.695, 0.826] 95% HDI (highest density interval, which concentrates 95% of the metric's probability mass) with segmentation and, without segmentation, 71.7% and [0.646, 0.786]. Conclusion: employing a novel DNN evaluation technique, which uses LRP and Brixia scores, we discovered that areas where radiologists found strong Covid-19 symptoms are the most important for the stacked DNN classification. External validation showed smaller accuracies than internal, indicating difficulty in generalization, which is positively affected by segmentation. Finally, the performance in the external dataset and the analysis with LRP suggest that DNNs can be trained in small and mixed datasets and still successfully detect Covid-19.


Data Engineer (Remote)

#artificialintelligence

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Automatic Parameter Optimization Using Genetic Algorithm in Deep Reinforcement Learning for Robotic Manipulation Tasks

arXiv.org Artificial Intelligence

Learning agents can make use of Reinforcement Learning (RL) to decide their actions by using a reward function. However, the learning process is greatly influenced by the elect of values of the hyperparameters used in the learning algorithm. This work proposed a Deep Deterministic Policy Gradient (DDPG) and Hindsight Experience Replay (HER) based method, which makes use of the Genetic Algorithm (GA) to fine-tune the hyperparameters' values. This method (GA+DDPG+HER) experimented on six robotic manipulation tasks: FetchReach; FetchSlide; FetchPush; FetchPickAndPlace; DoorOpening; and AuboReach. Analysis of these results demonstrated a significant increase in performance and a decrease in learning time. Also, we compare and provide evidence that GA+DDPG+HER is better than the existing methods.


Informed Priors for Knowledge Integration in Trajectory Prediction

arXiv.org Artificial Intelligence

Informed machine learning methods allow the integration of prior knowledge into learning systems. This can increase accuracy and robustness or reduce data needs. However, existing methods often assume hard constraining knowledge, that does not require to trade-off prior knowledge with observations, but can be used to directly reduce the problem space. Other approaches use specific, architectural changes as representation of prior knowledge, limiting applicability. We propose an informed machine learning method, based on continual learning. This allows the integration of arbitrary, prior knowledge, potentially from multiple sources, and does not require specific architectures. Furthermore, our approach enables probabilistic and multi-modal predictions, that can improve predictive accuracy and robustness. We exemplify our approach by applying it to a state-of-the-art trajectory predictor for autonomous driving. This domain is especially dependent on informed learning approaches, as it is subject to an overwhelming large variety of possible environments and very rare events, while requiring robust and accurate predictions. We evaluate our model on a commonly used benchmark dataset, only using data already available in a conventional setup. We show that our method outperforms both non-informed and informed learning methods, that are often used in the literature. Furthermore, we are able to compete with a conventional baseline, even using half as many observation examples.


OpenSRH: optimizing brain tumor surgery using intraoperative stimulated Raman histology

arXiv.org Artificial Intelligence

Accurate intraoperative diagnosis is essential for providing safe and effective care during brain tumor surgery. Our standard-of-care diagnostic methods are time, resource, and labor intensive, which restricts access to optimal surgical treatments. To address these limitations, we propose an alternative workflow that combines stimulated Raman histology (SRH), a rapid optical imaging method, with deep learning-based automated interpretation of SRH images for intraoperative brain tumor diagnosis and real-time surgical decision support. Here, we present OpenSRH, the first public dataset of clinical SRH images from 300+ brain tumors patients and 1300+ unique whole slide optical images. OpenSRH contains data from the most common brain tumors diagnoses, full pathologic annotations, whole slide tumor segmentations, raw and processed optical imaging data for end-to-end model development and validation. We provide a framework for patch-based whole slide SRH classification and inference using weak (i.e. patient-level) diagnostic labels. Finally, we benchmark two computer vision tasks: multiclass histologic brain tumor classification and patch-based contrastive representation learning. We hope OpenSRH will facilitate the clinical translation of rapid optical imaging and real-time ML-based surgical decision support in order to improve the access, safety, and efficacy of cancer surgery in the era of precision medicine. Dataset access, code, and benchmarks are available at opensrh.mlins.org.


Technology Pipeline for Large Scale Cross-Lingual Dubbing of Lecture Videos into Multiple Indian Languages

arXiv.org Artificial Intelligence

Cross-lingual dubbing of lecture videos requires the transcription of the original audio, correction and removal of disfluencies, domain term discovery, text-to-text translation into the target language, chunking of text using target language rhythm, text-to-speech synthesis followed by isochronous lipsyncing to the original video. This task becomes challenging when the source and target languages belong to different language families, resulting in differences in generated audio duration. This is further compounded by the original speaker's rhythm, especially for extempore speech. This paper describes the challenges in regenerating English lecture videos in Indian languages semi-automatically. A prototype is developed for dubbing lectures into 9 Indian languages. A mean-opinion-score (MOS) is obtained for two languages, Hindi and Tamil, on two different courses. The output video is compared with the original video in terms of MOS (1-5) and lip synchronisation with scores of 4.09 and 3.74, respectively. The human effort also reduces by 75%.


TOE: A Grid-Tagging Discontinuous NER Model Enhanced by Embedding Tag/Word Relations and More Fine-Grained Tags

arXiv.org Artificial Intelligence

So far, discontinuous named entity recognition (NER) has received increasing research attention and many related methods have surged such as hypergraph-based methods, span-based methods, and sequence-to-sequence (Seq2Seq) methods, etc. However, these methods more or less suffer from some problems such as decoding ambiguity and efficiency, which limit their performance. Recently, grid-tagging methods, which benefit from the flexible design of tagging systems and model architectures, have shown superiority to adapt for various information extraction tasks. In this paper, we follow the line of such methods and propose a competitive grid-tagging model for discontinuous NER. We call our model TOE because we incorporate two kinds of Tag-Oriented Enhancement mechanisms into a state-of-the-art (SOTA) grid-tagging model that casts the NER problem into word-word relationship prediction. First, we design a Tag Representation Embedding Module (TREM) to force our model to consider not only word-word relationships but also word-tag and tag-tag relationships. Concretely, we construct tag representations and embed them into TREM, so that TREM can treat tag and word representations as queries/keys/values and utilize self-attention to model their relationships. On the other hand, motivated by the Next-Neighboring-Word (NNW) and Tail-Head-Word (THW) tags in the SOTA model, we add two new symmetric tags, namely Previous-Neighboring-Word (PNW) and Head-Tail-Word (HTW), to model more fine-grained word-word relationships and alleviate error propagation from tag prediction. In the experiments of three benchmark datasets, namely CADEC, ShARe13 and ShARe14, our TOE model pushes the SOTA results by about 0.83%, 0.05% and 0.66% in F1, demonstrating its effectiveness.


When Bioprocess Engineering Meets Machine Learning: A Survey from the Perspective of Automated Bioprocess Development

arXiv.org Artificial Intelligence

Machine learning (ML) is becoming increasingly crucial in many fields of engineering but has not yet played out its full potential in bioprocess engineering. While experimentation has been accelerated by increasing levels of lab automation, experimental planning and data modeling are still largerly depend on human intervention. ML can be seen as a set of tools that contribute to the automation of the whole experimental cycle, including model building and practical planning, thus allowing human experts to focus on the more demanding and overarching cognitive tasks. First, probabilistic programming is used for the autonomous building of predictive models. Second, machine learning automatically assesses alternative decisions by planning experiments to test hypotheses and conducting investigations to gather informative data that focus on model selection based on the uncertainty of model predictions. This review provides a comprehensive overview of ML-based automation in bioprocess development. On the one hand, the biotech and bioengineering community should be aware of the potential and, most importantly, the limitation of existing ML solutions for their application in biotechnology and biopharma. On the other hand, it is essential to identify the missing links to enable the easy implementation of ML and Artificial Intelligence (AI) tools in valuable solutions for the bio-community.