The ubiquity of smartphones has led to an increase in on demand healthcare being supplied. For example, people can share their illness-related experiences with others similar to themselves, and healthcare experts can offer advice for better treatment and care for remediable, terminal and mental illnesses. As well as this human-to-human communication, there has been an increased use of human-to-computer digital health messaging, such as chatbots. These can prove advantageous as they offer synchronous and anonymous feedback without the need for a human conversational partner. However, there are many subtleties involved in human conversation that a computer agent may not properly exhibit. For example, there are various conversational styles, etiquettes, politeness strategies or empathic responses that need to be chosen appropriately for the conversation. Encouragingly, computers are social actors (CASA) posits that people apply the same social norms to computers as they would do to people. On from this, previous studies have focused on applying conversational strategies to computer agents to make them embody more favourable human characteristics. However, if a computer agent fails in this regard it can lead to negative reactions from users. Therefore, in this dissertation we describe a series of studies we carried out to lead to more effective human-to-computer digital health messaging. In our first study, we use the crowd [...] Our second study investigates the effect of a health chatbot's conversational style [...] In our final study, we investigate the format used by a chatbot when [...] In summary, we have researched how to create more effective digital health interventions starting from generating health messages, to choosing an appropriate formality of messaging, and finally to formatting messages which reference a user's previous utterances.

Since the onset of the COVID-19 pandemic, there has been a growing interest in studying epidemiological models. Traditional mechanistic models mathematically describe the transmission mechanisms of infectious diseases. However, they often suffer from limitations of oversimplified or fixed assumptions, which could cause sub-optimal predictive power and inefficiency in capturing complex relation information. Consequently, Graph Neural Networks (GNNs) have emerged as a progressively popular tool in epidemic research. In this paper, we endeavor to furnish a comprehensive review of GNNs in epidemic tasks and highlight potential future directions. To accomplish this objective, we introduce hierarchical taxonomies for both epidemic tasks and methodologies, offering a trajectory of development within this domain. For epidemic tasks, we establish a taxonomy akin to those typically employed within the epidemic domain. For methodology, we categorize existing work into Neural Models and Hybrid Models. Following this, we perform an exhaustive and systematic examination of the methodologies, encompassing both the tasks and their technical details. Furthermore, we discuss the limitations of existing methods from diverse perspectives and systematically propose future research directions. This survey aims to bridge literature gaps and promote the progression of this promising field, with a list of relevant papers at https://github.com/Emory-Melody/awesome-epidemic-modelingpapers. We hope that it will facilitate synergies between the communities of GNNs and epidemiology, and contribute to their collective progress.

We propose a constraint-based algorithm, which automatically determines causal relevance thresholds, to infer causal networks from data. We call these topological thresholds. We present two methods for determining the threshold: the first seeks a set of edges that leaves no disconnected nodes in the network; the second seeks a causal large connected component in the data. We tested these methods both for discrete synthetic and real data, and compared the results with those obtained for the PC algorithm, which we took as the benchmark. We show that this novel algorithm is generally faster and more accurate than the PC algorithm. The algorithm for determining the thresholds requires choosing a measure of causality. We tested our methods for Fisher Correlations, commonly used in PC algorithm (for instance in \cite{kalisch2005}), and further proposed a discrete and asymmetric measure of causality, that we called Net Influence, which provided very good results when inferring causal networks from discrete data. This metric allows for inferring directionality of the edges in the process of applying the thresholds, speeding up the inference of causal DAGs.

The popular subword tokenizers of current language models, such as Byte-Pair Encoding (BPE), are known not to respect morpheme boundaries, which affects the downstream performance of the models. While many improved tokenization algorithms have been proposed, their evaluation and cross-comparison is still an open problem. As a solution, we propose a combined intrinsic-extrinsic evaluation framework for subword tokenization. Intrinsic evaluation is based on our new UniMorph Labeller tool that classifies subword tokenization as either morphological or alien. Extrinsic evaluation, in turn, is performed via the Out-of-Vocabulary Generalization Challenge 1.0 benchmark, which consists of three newly specified downstream text classification tasks. Our empirical findings show that the accuracy of UniMorph Labeller is 98%, and that, in all language models studied (including ALBERT, BERT, RoBERTa, and DeBERTa), alien tokenization leads to poorer generalizations compared to morphological tokenization for semantic compositionality of word meanings.

The vast majority of the popular English named entity recognition (NER) datasets contain American or British English data, despite the existence of many global varieties of English. As such, it is unclear whether they generalize for analyzing use of English globally. To test this, we build a newswire dataset, the Worldwide English NER Dataset, to analyze NER model performance on low-resource English variants from around the world. We test widely used NER toolkits and transformer models, including models using the pre-trained contextual models RoBERTa and ELECTRA, on three datasets: a commonly used British English newswire dataset, CoNLL 2003, a more American focused dataset OntoNotes, and our global dataset. All models trained on the CoNLL or OntoNotes datasets experienced significant performance drops-over 10 F1 in some cases-when tested on the Worldwide English dataset. Upon examination of region-specific errors, we observe the greatest performance drops for Oceania and Africa, while Asia and the Middle East had comparatively strong performance. Lastly, we find that a combined model trained on the Worldwide dataset and either CoNLL or OntoNotes lost only 1-2 F1 on both test sets.

The wealth of information available through the Internet and social media is unprecedented. Within computing fields, websites such as Stack Overflow are considered important sources for users seeking solutions to their computing and programming issues. However, like other social media platforms, Stack Overflow contains a mixture of relevant and irrelevant information. In this paper, we evaluated neural network models to predict the quality of questions on Stack Overflow, as an example of Question Answering (QA) communities. Our results demonstrate the effectiveness of neural network models compared to baseline machine learning models, achieving an accuracy of 80%. Furthermore, our findings indicate that the number of layers in the neural network model can significantly impact its performance.

Information Extraction (IE) is a transformative process that converts unstructured text data into a structured format by employing entity and relation extraction (RE) methodologies. The identification of the relation between a pair of entities plays a crucial role within this framework. Despite the existence of various techniques for relation extraction, their efficacy heavily relies on access to labeled data and substantial computational resources. In addressing these challenges, Large Language Models (LLMs) emerge as promising solutions; however, they might return hallucinating responses due to their own training data. To overcome these limitations, Retrieved-Augmented Generation-based Relation Extraction (RAG4RE) in this work is proposed, offering a pathway to enhance the performance of relation extraction tasks. This work evaluated the effectiveness of our RAG4RE approach utilizing different LLMs. Through the utilization of established benchmarks, such as TACRED, TACREV, Re-TACRED, and SemEval RE datasets, our aim is to comprehensively evaluate the efficacy of our RAG4RE approach. In particularly, we leverage prominent LLMs including Flan T5, Llama2, and Mistral in our investigation. The results of our study demonstrate that our RAG4RE approach surpasses performance of traditional RE approaches based solely on LLMs, particularly evident in the TACRED dataset and its variations. Furthermore, our approach exhibits remarkable performance compared to previous RE methodologies across both TACRED and TACREV datasets, underscoring its efficacy and potential for advancing RE tasks in natural language processing.

Multi-modal 3D object detection models for automated driving have demonstrated exceptional performance on computer vision benchmarks like nuScenes. However, their reliance on densely sampled LiDAR point clouds and meticulously calibrated sensor arrays poses challenges for real-world applications. Issues such as sensor misalignment, miscalibration, and disparate sampling frequencies lead to spatial and temporal misalignment in data from LiDAR and cameras. Additionally, the integrity of LiDAR and camera data is often compromised by adverse environmental conditions such as inclement weather, leading to occlusions and noise interference. To address this challenge, we introduce MultiCorrupt, a comprehensive benchmark designed to evaluate the robustness of multi-modal 3D object detectors against ten distinct types of corruptions. We evaluate five state-of-the-art multi-modal detectors on MultiCorrupt and analyze their performance in terms of their resistance ability. Our results show that existing methods exhibit varying degrees of robustness depending on the type of corruption and their fusion strategy. We provide insights into which multi-modal design choices make such models robust against certain perturbations. The dataset generation code and benchmark are open-sourced at https://github.com/ika-rwth-aachen/MultiCorrupt.

Arrhythmias, detectable via electrocardiograms (ECGs), pose significant health risks, emphasizing the need for robust automated identification techniques. Although traditional deep learning methods have shown potential, recent advances in graph-based strategies are aimed at enhancing arrhythmia detection performance. However, effectively representing ECG signals as graphs remains a challenge. This study explores graph representations of ECG signals using Visibility Graph (VG) and Vector Visibility Graph (VVG), coupled with Graph Convolutional Networks (GCNs) for arrhythmia classification. Through experiments on the MIT-BIH dataset, we investigated various GCN architectures and preprocessing parameters. The results reveal that GCNs, when integrated with VG and VVG for signal graph mapping, can classify arrhythmias without the need for preprocessing or noise removal from ECG signals. While both VG and VVG methods show promise, VG is notably more efficient. The proposed approach was competitive compared to baseline methods, although classifying the S class remains challenging, especially under the inter-patient paradigm. Computational complexity, particularly with the VVG method, required data balancing and sophisticated implementation strategies. The source code is publicly available for further research and development at https://github.com/raffoliveira/VG_for_arrhythmia_classification_with_GCN.

Cutting planes (cuts) play an important role in solving mixed-integer linear programs (MILPs), which formulate many important real-world applications. Cut selection heavily depends on (P1) which cuts to prefer and (P2) how many cuts to select. Although modern MILP solvers tackle (P1)-(P2) by human-designed heuristics, machine learning carries the potential to learn more effective heuristics. However, many existing learning-based methods learn which cuts to prefer, neglecting the importance of learning how many cuts to select. Moreover, we observe that (P3) what order of selected cuts to prefer significantly impacts the efficiency of MILP solvers as well. To address these challenges, we propose a novel hierarchical sequence/set model (HEM) to learn cut selection policies. Specifically, HEM is a bi-level model: (1) a higher-level module that learns how many cuts to select, (2) and a lower-level module -- that formulates the cut selection as a sequence/set to sequence learning problem -- to learn policies selecting an ordered subset with the cardinality determined by the higher-level module. To the best of our knowledge, HEM is the first data-driven methodology that well tackles (P1)-(P3) simultaneously. Experiments demonstrate that HEM significantly improves the efficiency of solving MILPs on eleven challenging MILP benchmarks, including two Huawei's real problems.