Automatic source code analysis in key areas of software engineering, such as code security, can benefit from Machine Learning (ML). However, many standard ML approaches require a numeric representation of data and cannot be applied directly to source code. Thus, to enable ML, we need to embed source code into numeric feature vectors while maintaining the semantics of the code as much as possible. code2vec is a recently released embedding approach that uses the proxy task of method name prediction to map Java methods to feature vectors. However, experimentation with code2vec shows that it learns to rely on variable names for prediction, causing it to be easily fooled by typos or adversarial attacks. Moreover, it is only able to embed individual Java methods and cannot embed an entire collection of methods such as those present in a typical Java class, making it difficult to perform predictions at the class level (e.g., for the identification of malicious Java classes). Both shortcomings are addressed in the research presented in this paper. We investigate the effect of obfuscating variable names during the training of a code2vec model to force it to rely on the structure of the code rather than specific names and consider a simple approach to creating class-level embeddings by aggregating sets of method embeddings. Our results, obtained on a challenging new collection of source-code classification problems, indicate that obfuscating variable names produces an embedding model that is both impervious to variable naming and more accurately reflects code semantics. The datasets, models, and code are shared for further ML research on source code.

Community is a common characteristic of networks including social networks, biological networks, computer and information networks, to name a few. Community detection is a basic step for exploring and analysing these network data. Typically, homogenous network is a type of networks which consists of only one type of objects with one type of links connecting them. There has been a large body of developments in models and algorithms to detect communities over it. However, real-world networks naturally exhibit heterogeneous qualities appearing as multiple types of objects with multi-relational links connecting them. Those heterogeneous information could facilitate the community detection for its constituent homogeneous networks, but has not been fully explored. In this paper, we exploit heterogeneous multi-relational networks (HMRNet) and propose an efficient message passing based algorithm to simultaneously detect communities for all homogeneous networks. Specifically, an HMRNet is reorganized into a hierarchical structure with homogeneous networks as its layers and heterogeneous links connecting them. To detect communities in such an HMRNet, the problem is formulated as a maximum a posterior (MAP) over a factor graph. Finally a message passing based algorithm is derived to find a best solution of the MAP problem. Evaluation on both synthetic and real-world networks confirms the effectiveness of the proposed method.

Random Forest remains one of Data Mining's most enduring ensemble algorithms, achieving well-documented levels of accuracy and processing speed, as well as regularly appearing in new research. However, with data mining now reaching the domain of hardware-constrained devices such as smartphones and Internet of Things (IoT) devices, there is continued need for further research into algorithm efficiency to deliver greater processing speed without sacrificing accuracy. Our proposed FastForest algorithm delivers an average 24% increase in processing speed compared with Random Forest whilst maintaining (and frequently exceeding) it on classification accuracy over tests involving 45 datasets. FastForest achieves this result through a combination of three optimising components - Subsample Aggregating ('Subbagging'), Logarithmic Split-Point Sampling and Dynamic Restricted Subspacing. Moreover, detailed testing of Subbagging sizes has found an optimal scalar delivering a positive mix of processing performance and accuracy.

Applications based on Machine Learning models have now become an indispensable part of the everyday life and the professional world. A critical question then recently arised among the population: Do algorithmic decisions convey any type of discrimination against specific groups of population or minorities? In this paper, we show the importance of understanding how a bias can be introduced into automatic decisions. We first present a mathematical framework for the fair learning problem, specifically in the binary classification setting. We then propose to quantify the presence of bias by using the standard Disparate Impact index on the real and well-known Adult income data set. Finally, we check the performance of different approaches aiming to reduce the bias in binary classification outcomes. Importantly, we show that some intuitive methods are ineffective. This sheds light on the fact trying to make fair machine learning models may be a particularly challenging task, in particular when the training observations contain a bias.

We study the problem of generating inferential texts of events for a variety of commonsense like \textit{if-else} relations. Existing approaches typically use limited evidence from training examples and learn for each relation individually. In this work, we use multiple knowledge sources as fuels for the model. Existing commonsense knowledge bases like ConceptNet are dominated by taxonomic knowledge (e.g., \textit{isA} and \textit{relatedTo} relations), having a limited number of inferential knowledge. We use not only structured commonsense knowledge bases, but also natural language snippets from search-engine results. These sources are incorporated into a generative base model via key-value memory network. In addition, we introduce a meta-learning based multi-task learning algorithm. For each targeted commonsense relation, we regard the learning of examples from other relations as the meta-training process, and the evaluation on examples from the targeted relation as the meta-test process. We conduct experiments on Event2Mind and ATOMIC datasets. Results show that both the integration of multiple knowledge sources and the use of the meta-learning algorithm improve the performance.

Several studies point out different causes of performance degradation in supervised machine learning. Problems such as class imbalance, overlapping, small-disjuncts, noisy labels, and sparseness limit accuracy in classification algorithms. Even though a number of approaches either in the form of a methodology or an algorithm try to minimize performance degradation, they have been isolated efforts with limited scope. Most of these approaches focus on remediation of one among many problems, with experimental results coming from few datasets and classification algorithms, insufficient measures of prediction power, and lack of statistical validation for testing the real benefit of the proposed approach. This paper consists of two main parts: In the first part, a novel probabilistic diagnostic model based on identifying signs and symptoms of each problem is presented. Thereby, early and correct diagnosis of these problems is to be achieved in order to select not only the most convenient remediation treatment but also unbiased performance metrics. Secondly, the behavior and performance of several supervised algorithms are studied when training sets have such problems. Therefore, prediction of success for treatments can be estimated across classifiers.

One of the most important goals of digital humanities is to provide researchers with data and tools for new research questions, either by increasing the scale of scholarly studies, linking existing databases, or improving the accessibility of data. Here, the FAIR principles provide a useful framework as these state that data needs to be: Findable, as they are often scattered among various sources; Accessible, since some might be offline or behind paywalls; Interoperable, thus using standard knowledge representation formats and shared vocabularies; and Reusable, through adequate licensing and permissions. Integrating data from diverse humanities domains is not trivial, research questions such as "was economic wealth equally distributed in the 18th century?", or "what are narratives constructed around disruptive media events?") and preparation phases (e.g. data collection, knowledge organisation, cleaning) of scholars need to be taken into account. In this chapter, we describe the ontologies and tools developed and integrated in the Dutch national project CLARIAH to address these issues across datasets from three fundamental domains or "pillars" of the humanities (linguistics, social and economic history, and media studies) that have paradigmatic data representations (textual corpora, structured data, and multimedia). We summarise the lessons learnt from using such ontologies and tools in these domains from a generalisation and reusability perspective.

Predictive auxiliary tasks have been shown to improve performance in numerous reinforcement learning works, however, this effect is still not well understood. The primary purpose of the work presented here is to investigate the impact that an auxiliary task's prediction timescale has on the agent's policy performance. We consider auxiliary tasks which learn to make on-policy predictions using temporal difference learning. We test the impact of prediction timescale using a specific form of auxiliary task in which the input image is used as the prediction target, which we refer to as temporal difference autoencoders (TD-AE). We empirically evaluate the effect of TD-AE on the A2C algorithm in the VizDoom environment using different prediction timescales. While we do not observe a clear relationship between the prediction timescale on performance, we make the following observations: 1) using auxiliary tasks allows us to reduce the trajectory length of the A2C algorithm, 2) in some cases temporally extended TD-AE performs better than a straight autoencoder, 3) performance with auxiliary tasks is sensitive to the weight placed on the auxiliary loss, 4) despite this sensitivity, auxiliary tasks improved performance without extensive hyper-parameter tuning. Our overall conclusions are that TD-AE increases the robustness of the A2C algorithm to the trajectory length and while promising, further study is required to fully understand the relationship between auxiliary task prediction timescale and the agent's performance.

Intrinsic motivation enables reinforcement learning (RL) agents to explore when rewards are very sparse, where traditional exploration heuristics such as Boltzmann or ɛ-greedy would typically fail. However, intrinsic exploration is generally handled in an ad-hoc manner, where exploration is not treated as a core objective of the learning process; this weak formulation leads to sub-optimal exploration performance. To overcome this problem, we propose a framework based on multi-objective RL where both exploration and exploitation are being optimized as separate objectives. This formulation brings the balance between exploration and exploitation at a policy level, resulting in advantages over traditional methods. This also allows for controlling exploration while learning, at no extra cost. Such strategies achieve a degree of control over agent exploration that was previously unattainable with classic or intrinsic rewards. We demonstrate scalability to continuous state-action spaces by presenting a method (EMU-Q) based on our framework, guiding exploration towards regions of higher value-function uncertainty. EMU-Q is experimentally shown to outperform classic exploration techniques and other intrinsic RL methods on a continuous control benchmark and on a robotic manipulator.

We cast neural machine translation (NMT) as a classification task in an autoregressive setting and analyze the limitations of both classification and autoregression components. Classifiers are known to perform better with balanced class distributions during training. Since the Zipfian nature of languages causes imbalanced classes, we explore the effect of class imbalance on NMT. We analyze the effect of vocabulary sizes on NMT performance and reveal an explanation for 'why' certain vocabulary sizes are better than others.