Drone-based remote sensing combined with AI-driven methodologies has shown great potential for accurate mapping and monitoring of coral reef ecosystems. This study presents a novel multi-scale approach to coral reef monitoring, integrating fine-scale underwater imagery with medium-scale aerial imagery. Underwater images are captured using an Autonomous Surface Vehicle (ASV), while aerial images are acquired with an aerial drone. A transformer-based deep-learning model is trained on underwater images to detect the presence of 31 classes covering various coral morphotypes, associated fauna, and habitats. These predictions serve as annotations for training a second model applied to aerial images. The transfer of information across scales is achieved through a weighted footprint method that accounts for partial overlaps between underwater image footprints and aerial image tiles. The results show that the multi-scale methodology successfully extends fine-scale classification to larger reef areas, achieving a high degree of accuracy in predicting coral morphotypes and associated habitats. The method showed a strong alignment between underwater-derived annotations and ground truth data, reflected by an AUC (Area Under the Curve) score of 0.9251. This shows that the integration of underwater and aerial imagery, supported by deep-learning models, can facilitate scalable and accurate reef assessments. This study demonstrates the potential of combining multi-scale imaging and AI to facilitate the monitoring and conservation of coral reefs. Our approach leverages the strengths of underwater and aerial imagery, ensuring the precision of fine-scale analysis while extending it to cover a broader reef area.

Failure of machine learning models to generalize to new data is a core problem limiting the reliability of AI systems, partly due to the lack of simple and robust methods for comparing new data to the original training dataset. We propose a standardized approach for assessing data similarity in a model-agnostic manner by constructing a supervised autoencoder for generalizability estimation (SAGE). We compare points in a low-dimensional embedded latent space, defining empirical probability measures for k -Nearest Neighbors (kNN) distance, reconstruction of inputs and task-based performance. As proof of concept for classification tasks, we use MNIST and CIFAR-10 to demonstrate how an ensemble output probability score can separate deformed images from a mixture of typical test examples, and how this SAGE score is robust to transformations of increasing severity. As further proof of concept, we extend this approach to a regression task using non-imaging data (UCI Abalone). In all cases, we show that out-of-the-box model performance increases after SAGE score filtering, even when applied to data from the model's own training and test datasets. Our out-of-distribution scoring method can be introduced during several steps of model construction and assessment, leading to future improvements in responsible deep learning implementation. 1 Background The presence of generalization gaps, where machine learning performance degrades when a trained model encounters previously-unseen data, represents a critical ongoing challenge in the implementation of AI systems.

Marine heatwaves (MHWs) are extreme ocean-temperature events with significant impacts on marine ecosystems and related industries. Accurate forecasts (one to six months ahead) of MHWs would aid in mitigating these impacts. However, forecasting MHWs presents a challenging imbalanced regression task due to the rarity of extreme temperature anomalies in comparison to more frequent moderate conditions. In this study, we examine monthly MHW forecasts for 12 locations around New Zealand. We use a fully-connected neural network and compare standard and specialized regression loss functions, including the mean squared error (MSE), the mean absolute error (MAE), the Huber, the weighted MSE, the focal-R, the balanced MSE, and a proposed scaling-weighted MSE. Results show that (i) short lead times (one month) are considerably more predictable than three- and six-month leads, (ii) models trained with the standard MSE or MAE losses excel at forecasting average conditions but struggle to capture extremes, and (iii) specialized loss functions such as the balanced MSE and our scaling-weighted MSE substantially improve forecasting of MHW and suspected MHW events. These findings underscore the importance of tailored loss functions for imbalanced regression, particularly in forecasting rare but impactful events such as MHWs.

Accurate and efficient climate simulations are crucial for understanding Earth's evolving climate. However, current general circulation models (GCMs) face challenges in capturing unresolved physical processes, such as cloud and convection. A common solution is to adopt cloud resolving models, that provide more accurate results than the standard subgrid parametrisation schemes typically used in GCMs. However, cloud resolving models, also referred to as super paramtetrizations, remain computationally prohibitive. Hybrid modeling, which integrates deep learning with equation-based GCMs, offers a promising alternative but often struggles with long-term stability and accuracy issues. In this work, we find that water vapor oversaturation during condensation is a key factor compromising the stability of hybrid models. To address this, we introduce CondensNet, a novel neural network architecture that embeds a self-adaptive physical constraint to correct unphysical condensation processes. CondensNet effectively mitigates water vapor oversaturation, enhancing simulation stability while maintaining accuracy and improving computational efficiency compared to super parameterization schemes. We integrate CondensNet into a GCM to form PCNN-GCM (Physics-Constrained Neural Network GCM), a hybrid deep learning framework designed for long-term stable climate simulations in real-world conditions, including ocean and land. PCNN-GCM represents a significant milestone in hybrid climate modeling, as it shows a novel way to incorporate physical constraints adaptively, paving the way for accurate, lightweight, and stable long-term climate simulations.

Arabic is one of the oldest languages still in use today. As a result, several Arabic-speaking regions have developed dialects that are unique to them. Dialect and emotion recognition have various uses in Arabic text analysis, such as determining an online customer's origin based on their comments. Furthermore, intelligent chatbots that are aware of a user's emotions can respond appropriately to the user. Current research in emotion detection in the Arabic language lacks awareness of how emotions are exhibited in different dialects, which motivates the work found in this study. This research addresses the problems of dialect and emotion classification in Arabic. Specifically, this is achieved by building a novel framework that can identify and predict Arabic dialects and emotions from a given text. The framework consists of three modules: A text-preprocessing module, a classification module, and a clustering module with the novel capability of building new dialect-aware emotion lexicons. The proposed framework generated a new emotional lexicon for different dialects. It achieved an accuracy of 88.9% in classifying Arabic dialects, which outperforms the state-of-the-art results by 6.45 percentage points. Furthermore, the framework achieved 89.1-79% accuracy in detecting emotions in the Egyptian and Gulf dialects, respectively.

In data mining, when binary prediction rules are used to predict a binary outcome, many performance measures are used in a vast array of literature for the purposes of evaluation and comparison. Some examples include classification accuracy, precision, recall, F measures, and Jaccard index. Typically, these performance measures are only approximately estimated from a finite dataset, which may lead to findings that are not statistically significant. In order to properly quantify such statistical uncertainty, it is important to provide confidence intervals associated with these estimated performance measures. We consider statistical inference about general performance measures used in data mining, with both individual and joint confidence intervals. These confidence intervals are based on asymptotic normal approximations and can be computed fast, without needs to do bootstrap resampling. We study the finite sample coverage probabilities for these confidence intervals and also propose a `blurring correction' on the variance to improve the finite sample performance. This 'blurring correction' generalizes the plus-four method from binomial proportion to general performance measures used in data mining. Our framework allows multiple performance measures of multiple classification rules to be inferred simultaneously for comparisons.

Due to the challenge posed by multi-source and heterogeneous data collected from diverse environments, causal relationships among features can exhibit variations influenced by different time spans, regions, or strategies. This diversity makes a single causal model inadequate for accurately representing complex causal relationships in all observational data, a crucial consideration in causal learning. To address this challenge, the nonlinear Causal Kernel Clustering method is introduced for heterogeneous subgroup causal learning, highlighting variations in causal relationships across diverse subgroups. The main component for clustering heterogeneous subgroups lies in the construction of the $u$-centered sample mapping function with the property of unbiased estimation, which assesses the differences in potential nonlinear causal relationships in various samples and supported by causal identifiability theory. Experimental results indicate that the method performs well in identifying heterogeneous subgroups and enhancing causal learning, leading to a reduction in prediction error.

Recent studies show that in supervised fine-tuning (SFT) of large language models (LLMs), data quality matters more than quantity. While most data cleaning methods concentrate on filtering entire samples, the quality of individual tokens within a sample can vary significantly. After pre-training, even in high-quality samples, patterns or phrases that are not task-related can be redundant or uninformative. Continuing to fine-tune on these patterns may offer limited benefit and even degrade downstream task performance. In this paper, we investigate token quality from a noisy-label perspective and propose a generic token cleaning pipeline for SFT tasks. Our method filters out uninformative tokens while preserving those carrying key task-specific information. Specifically, we first evaluate token quality by examining the influence of model updates on each token, then apply a threshold-based separation. The token influence can be measured in a single pass with a fixed reference model or iteratively with self-evolving reference models. The benefits and limitations of both methods are analyzed theoretically by error upper bounds. Extensive experiments show that our framework consistently improves performance across multiple downstream tasks.

Acoustic telemetry data plays a vital role in understanding the behaviour and movement of aquatic animals. However, these datasets, which often consist of millions of individual data points, frequently contain anomalous movements that pose significant challenges. Traditionally, anomalous movements are identified either manually or through basic statistical methods, approaches that are time-consuming and prone to high rates of unidentified anomalies in large datasets. This study focuses on the development of automated classifiers for a large telemetry dataset comprising detections from fifty acoustically tagged dusky kob monitored in the Breede Estuary, South Africa. Using an array of 16 acoustic receivers deployed throughout the estuary between 2016 and 2021, we collected over three million individual data points. We present detailed guidelines for data pre-processing, resampling strategies, labelling process, feature engineering, data splitting methodologies, and the selection and interpretation of machine learning and deep learning models for anomaly detection. Among the evaluated models, neural networks autoencoder (NN-AE) demonstrated superior performance, aided by our proposed threshold-finding algorithm. NN-AE achieved a high recall with no false normal (i.e., no misclassifications of anomalous movements as normal patterns), a critical factor in ensuring that no true anomalies are overlooked. In contrast, other models exhibited false normal fractions exceeding 0.9, indicating they failed to detect the majority of true anomalies; a significant limitation for telemetry studies where undetected anomalies can distort interpretations of movement patterns. While the NN-AE's performance highlights its reliability and robustness in detecting anomalies, it faced challenges in accurately learning normal movement patterns when these patterns gradually deviated from anomalous ones.

The preservation of aquatic biodiversity is critical in mitigating the effects of climate change. Aquatic scene understanding plays a pivotal role in aiding marine scientists in their decision-making processes. In this paper, we introduce AquaticCLIP, a novel contrastive language-image pre-training model tailored for aquatic scene understanding. AquaticCLIP presents a new unsupervised learning framework that aligns images and texts in aquatic environments, enabling tasks such as segmentation, classification, detection, and object counting. By leveraging our large-scale underwater image-text paired dataset without the need for ground-truth annotations, our model enriches existing vision-language models in the aquatic domain. For this purpose, we construct a 2 million underwater image-text paired dataset using heterogeneous resources, including YouTube, Netflix, NatGeo, etc. To fine-tune AquaticCLIP, we propose a prompt-guided vision encoder that progressively aggregates patch features via learnable prompts, while a vision-guided mechanism enhances the language encoder by incorporating visual context. The model is optimized through a contrastive pretraining loss to align visual and textual modalities. AquaticCLIP achieves notable performance improvements in zero-shot settings across multiple underwater computer vision tasks, outperforming existing methods in both robustness and interpretability. Our model sets a new benchmark for vision-language applications in underwater environments. The code and dataset for AquaticCLIP are publicly available on GitHub at xxx.