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Learning Bayesian networks with ancestral constraints
Eunice Yuh-Jie Chen, Yujia Shen, Arthur Choi, Adnan Darwiche
We consider the problem of learning Bayesian networks optimally, when subject to background knowledge in the form of ancestral constraints. Our approach is based on a recently proposed framework for optimal structure learning based on non-decomposable scores, which is general enough to accommodate ancestral constraints. The proposed framework exploits oracles for learning structures using decomposable scores, which cannot accommodate ancestral constraints since they are non-decomposable. We show how to empower these oracles by passing them decomposable constraints that they can handle, which are inferred from ancestral constraints that they cannot handle. Empirically, we demonstrate that our approach can be orders-of-magnitude more efficient than alternative frameworks, such as those based on integer linear programming.
Combining Low-Density Separators with CNNs
This work explores CNNs for the recognition of novel categories from few examples. Inspired by the transferability properties of CNNs, we introduce an additional unsupervised meta-training stage that exposes multiple top layer units to a large amount of unlabeled real-world images. By encouraging these units to learn diverse sets of low-density separators across the unlabeled data, we capture a more generic, richer description of the visual world, which decouples these units from ties to a specific set of categories. We propose an unsupervised margin maximization that jointly estimates compact high-density regions and infers low-density separators. The low-density separator (LDS) modules can be plugged into any or all of the top layers of a standard CNN architecture. The resulting CNNs significantly improve the performance in scene classification, fine-grained recognition, and action recognition with small training samples.
Active Nearest-Neighbor Learning in Metric Spaces
Aryeh Kontorovich, Sivan Sabato, Ruth Urner
We propose a pool-based non-parametric active learning algorithm for general metric spaces, called MArgin Regularized Metric Active Nearest Neighbor (MARMANN), which outputs a nearest-neighbor classifier. We give prediction error guarantees that depend on the noisy-margin properties of the input sample, and are competitive with those obtained by previously proposed passive learners. We prove that the label complexity of MARMANN is significantly lower than that of any passive learner with similar error guarantees. Our algorithm is based on a generalized sample compression scheme and a new label-efficient active model-selection procedure.
Fast and accurate spike sorting of high-channel count probes with KiloSort
Marius Pachitariu, Nicholas A. Steinmetz, Shabnam N. Kadir, Matteo Carandini, Kenneth D. Harris
New silicon technology is enabling large-scale electrophysiological recordings in vivo from hundreds to thousands of channels. Interpreting these recordings requires scalable and accurate automated methods for spike sorting, which should minimize the time required for manual curation of the results. Here we introduce KiloSort, a new integrated spike sorting framework that uses template matching both during spike detection and during spike clustering. KiloSort models the electrical voltage as a sum of template waveforms triggered on the spike times, which allows overlapping spikes to be identified and resolved. Unlike previous algorithms that compress the data with PCA, KiloSort operates on the raw data which allows it to construct a more accurate model of the waveforms. Processing times are faster than in previous algorithms thanks to batch-based optimization on GPUs. We compare KiloSort to an established algorithm and show favorable performance, at much reduced processing times. A novel post-clustering merging step based on the continuity of the templates further reduced substantially the number of manual operations required on this data, for the neurons with nearzero error rates, paving the way for fully automated spike sorting of multichannel electrode recordings.
On Valid Optimal Assignment Kernels and Applications to Graph Classification
Nils M. Kriege, Pierre-Louis Giscard, Richard Wilson
The success of kernel methods has initiated the design of novel positive semidefinite functions, in particular for structured data. A leading design paradigm for this is the convolution kernel, which decomposes structured objects into their parts and sums over all pairs of parts. Assignment kernels, in contrast, are obtained from an optimal bijection between parts, which can provide a more valid notion of similarity. In general however, optimal assignments yield indefinite functions, which complicates their use in kernel methods. We characterize a class of base kernels used to compare parts that guarantees positive semidefinite optimal assignment kernels. These base kernels give rise to hierarchies from which the optimal assignment kernels are computed in linear time by histogram intersection. We apply these results by developing the Weisfeiler-Lehman optimal assignment kernel for graphs. It provides high classification accuracy on widely-used benchmark data sets improving over the original Weisfeiler-Lehman kernel.
Convolutional Neural Fabrics
Despite the success of CNNs, selecting the optimal architecture for a given task remains an open problem. Instead of aiming to select a single optimal architecture, we propose a "fabric" that embeds an exponentially large number of architectures. The fabric consists of a 3D trellis that connects response maps at different layers, scales, and channels with a sparse homogeneous local connectivity pattern.
Integrated perception with recurrent multi-task neural networks
Modern discriminative predictors have been shown to match natural intelligences inspecific perceptual tasks in image classification, object and part detection, boundary extraction, etc. However, a major advantage that natural intelligences still have is that they work well for all perceptual problems together, solving them efficiently and coherently in an integrated manner. In order to capture some of these advantages in machine perception, we ask two questions: whether deep neural networks can learn universal image representations, useful not only for a single task but for all of them, and how the solutions to the different tasks can be integrated in this framework. We answer by proposing a new architecture, which we call multinet, in which not only deep image features are shared between tasks, but where tasks can interact in a recurrent manner by encoding the results of their analysis in a common shared representation of the data. In this manner, we show that the performance of individual tasks in standard benchmarks can be improved first by sharing features between them and then, more significantly, by integrating their solutions in the common representation.