Semantic memory refers to our knowledge of facts and relationships between concepts. A successful semantic memory depends on inferring relationships between items that are not explicitly taught. Recent mathematical modeling of episodic memory argues that episodic recall relies on retrieval of a gradually-changing representation of temporal context. We show that retrieved context enables the development of a global memory space that reflects relationships between all items that have been previously learned. When newly-learned information is integrated into this structure, it is placed in some relationship to all other items, even if that relationship has not been explicitly learned. We demonstrate this effect for global semantic structures shaped topologically as a ring, and as a two-dimensional sheet. We also examined the utility of this learning algorithm for learning a more realistic semantic space by training it on a large pool of synonym pairs. Retrieved context enabled the model to "infer" relationships between synonym pairs that had not yet been presented.

In bioinformatics it is often desirable to combine data from various measurement sources and thus structured feature vectors are to be analyzed that possess different intrinsic blocking characteristics (e.g., different patterns of missing values, observation noise levels, effective intrinsic dimensionalities). We propose a new machine learning tool, heterogeneous component analysis (HCA), for feature extraction in order to better understand the factors that underlie such complex structured heterogeneous data. HCA is a linear block-wise sparse Bayesian PCA based not only on a probabilistic model with block-wise residual variance terms but also on a Bayesian treatment of a block-wise sparse factor-loading matrix. We study various algorithms that implement our HCA concept extracting sparse heterogeneous structure by obtaining common components for the blocks and specific components within each block. Simulations on toy and bioinformatics data underline the usefulness of the proposed structured matrix factorization concept.

A nonlinear dynamic system is called contracting if initial conditions are forgotten exponentially fast, so that all trajectories converge to a single trajectory. We use contraction theory to derive an upper bound for the strength of recurrent connections that guarantees contraction for complex neural networks. Specifically, we apply this theory to a special class of recurrent networks, often called Cooperative Competitive Networks (CCNs), which are an abstract representation of the cooperative-competitive connectivity observed in cortex. This specific type of network is believed to play a major role in shaping cortical responses and selecting the relevant signal among distractors and noise. In this paper, we analyze contraction of combined CCNs of linear threshold units and verify the results of our analysis in a hybrid analog/digital VLSI CCN comprising spiking neurons and dynamic synapses.

We present an efficient generalization of the sparse pseudo-input Gaussian process (SPGP) model developed by Snelson and Ghahramani [1], applying it to binary classification problems.

We propose a compact, low power VLSI network of spiking neurons which can learn to classify complex patterns of mean firing rates online and in real-time. The network of integrate-and-fire neurons is connected by bistable synapses that can change their weight using a local spike-based plasticity mechanism. Learning is supervised by a teacher which provides an extra input to the output neurons during training. The synaptic weights are updated only if the current generated by the plastic synapses does not match the output desired by the teacher (as in the perceptron learning rule). We present experimental results that demonstrate how this VLSI network is able to robustly classify uncorrelated linearly separable spatial patterns of mean firing rates.

Clustering is often formulated as a discrete optimization problem. The objective is to find, among all partitions of the data set, the best one according to some quality measure. However, in the statistical setting where we assume that the finite data set has been sampled from some underlying space, the goal is not to find the best partition of the given sample, but to approximate the true partition of the underlying space. We argue that the discrete optimization approach usually does not achieve this goal. As an alternative, we suggest the paradigm of "nearest neighbor clustering". Instead of selecting the best out of all partitions of the sample, it only considers partitions in some restricted function class. Using tools from statistical learning theory we prove that nearest neighbor clustering is statistically consistent. Moreover, its worst case complexity is polynomial by construction, and it can be implemented with small average case complexity using branch and bound.

Recent experimental studies have focused on the specialization of different neural structures for different types of instrumental behavior. Recent theoretical work has provided normative accounts for why there should be more than one control system, and how the output of different controllers can be integrated. Two particlar controllers have been identified, one associated with a forward model and the prefrontal cortex and a second associated with computationally simpler, habitual, actor-critic methods and part of the striatum. We argue here for the normative appropriateness of an additional, but so far marginalized control system, associated with episodic memory, and involving the hippocampus and medial temporal cortices. We analyze in depth a class of simple environments to show that episodic control should be useful in a range of cases characterized by complexity and inferential noise, and most particularly at the very early stages of learning, long before habitization has set in. We interpret data on the transfer of control from the hippocampus to the striatum in the light of this hypothesis.

Reward-modulated spike-timing-dependent plasticity (STDP) has recently emerged as a candidate for a learning rule that could explain how local learning rules at single synapses support behaviorally relevant adaptive changes in complex networks of spiking neurons. However the potential and limitations of this learning rule could so far only be tested through computer simulations. This article provides tools for an analytic treatment of reward-modulated STDP, which allow us to predict under which conditions reward-modulated STDP will be able to achieve a desired learning effect. In particular, we can produce in this way a theoretical explanation and a computer model for a fundamental experimental finding on biofeedback in monkeys (reported in [1]).

Simulated annealing is a popular method for approaching the solution of a global optimization problem. Existing results on its performance apply to discrete combinatorial optimization where the optimization variables can assume only a finite set of possible values. We introduce a new general formulation of simulated annealing which allows one to guarantee finite-time performance in the optimization of functions of continuous variables. The results hold universally for any optimization problem on a bounded domain and establish a connection between simulated annealing and up-to-date theory of convergence of Markov chain Monte Carlo methods on continuous domains. This work is inspired by the concept of finite-time learning with known accuracy and confidence developed in statistical learning theory.

Statistical models on full and partial rankings of n items are often of limited practical use for large n due to computational consideration. We explore the use of nonparametric models for partially ranked data and derive efficient procedures for their use for large n. The derivations are largely possible through combinatorial and algebraic manipulations based on the lattice of partial rankings. In particular, we demonstrate for the first time a nonparametric coherent and consistent model capable of efficiently aggregating partially ranked data of different types.