Rodents navigating in a well-known environment can rapidly learn and revisit observed reward locations, often after a single trial. While the mechanism for rapid path planning is unknown, the CA3 region in the hippocampus plays an important role, and emerging evidence suggests that place cell activity during hippocampal preplay periods may trace out future goal-directed trajectories. Here, we show how a particular mapping of space allows for the immediate generation of trajectories between arbitrary start and goal locations in an environment, based only on the mapped representation of the goal. We show that this representation can be implemented in a neural attractor network model, resulting in bump--like activity profiles resembling those of the CA3 region of hippocampus. Neurons tend to locally excite neurons with similar place field centers, while inhibiting other neurons with distant place field centers, such that stable bumps of activity can form at arbitrary locations in the environment. The network is initialized to represent a point in the environment, then weakly stimulated with an input corresponding to an arbitrary goal location. We show that the resulting activity can be interpreted as a gradient ascent on the value function induced by a reward at the goal location. Indeed, in networks with large place fields, we show that the network properties cause the bump to move smoothly from its initial location to the goal, around obstacles or walls. Our results illustrate that an attractor network with hippocampal-like attributes may be important for rapid path planning.

We propose the infinite factorial dynamic model (iFDM), a general Bayesian nonparametric model for source separation. Our model builds on the Markov Indian buffet process to consider a potentially unbounded number of hidden Markov chains (sources) that evolve independently according to some dynamics, in which the state space can be either discrete or continuous. For posterior inference, we develop an algorithm based on particle Gibbs with ancestor sampling that can be efficiently applied to a wide range of source separation problems. We evaluate the performance of our iFDM on four well-known applications: multitarget tracking, cocktail party, power disaggregation, and multiuser detection. Our experimental results show that our approach for source separation does not only outperform previous approaches, but it can also handle problems that were computationally intractable for existing approaches.

Random walk kernels measure graph similarity by counting matching walks in two graphs. In their most popular form of geometric random walk kernels, longer walks of length $k$ are downweighted by a factor of $\lambda^k$ ($\lambda < 1$) to ensure convergence of the corresponding geometric series. We know from the field of link prediction that this downweighting often leads to a phenomenon referred to as halting: Longer walks are downweighted so much that the similarity score is completely dominated by the comparison of walks of length 1. This is a naive kernel between edges and vertices. We theoretically show that halting may occur in geometric random walk kernels. We also empirically quantify its impact in simulated datasets and popular graph classification benchmark datasets. Our findings promise to be instrumental in future graph kernel development and applications of random walk kernels.

The process of dynamic state estimation (filtering) based on point process observations is in general intractable. Numerical sampling techniques are often practically useful, but lead to limited conceptual insight about optimal encoding/decoding strategies, which are of significant relevance to Computational Neuroscience. We develop an analytically tractable Bayesian approximation to optimal filtering based on point process observations, which allows us to introduce distributional assumptions about sensory cell properties, that greatly facilitates the analysis of optimal encoding in situations deviating from common assumptions of uniform coding. The analytic framework leads to insights which are difficult to obtain from numerical algorithms, and is consistent with experiments about the distribution of tuning curve centers. Interestingly, we find that the information gained from the absence of spikes may be crucial to performance.

In this work we aim at extending theoretical foundations of lifelong learning. Previous work analyzing this scenario is based on the assumption that the tasks are sampled i.i.d. from a task environment or limited to strongly constrained data distributions. Instead we study two scenarios when lifelong learning is possible, even though the observed tasks do not form an i.i.d. sample: first, when they are sampled from the same environment, but possibly with dependencies, and second, when the task environment is allowed to change over time. In the first case we prove a PAC-Bayesian theorem, which can be seen as a direct generalization of the analogous previous result for the i.i.d. case. For the second scenario we propose to learn an inductive bias in form of a transfer procedure. We present a generalization bound and show on a toy example how it can be used to identify a beneficial transfer algorithm.

We propose a simple method to learn linear causal cyclic models in the presence of latent variables. The method relies on equilibrium data of the model recorded under a specific kind of interventions (``shift interventions''). The location and strength of these interventions do not have to be known and can be estimated from the data. Our method, called BACKSHIFT, only uses second moments of the data and performs simple joint matrix diagonalization, applied to differences between covariance matrices. We give a sufficient and necessary condition for identifiability of the system, which is fulfilled almost surely under some quite general assumptions if and only if there are at least three distinct experimental settings, one of which can be pure observational data. We demonstrate the performance on some simulated data and applications in flow cytometry and financial time series.

In simple perceptual decisions the brain has to identify a stimulus based on noisy sensory samples from the stimulus. Basic statistical considerations state that the reliability of the stimulus information, i.e., the amount of noise in the samples, should be taken into account when the decision is made. However, for perceptual decision making experiments it has been questioned whether the brain indeed uses the reliability for making decisions when confronted with unpredictable changes in stimulus reliability. We here show that even the basic drift diffusion model, which has frequently been used to explain experimental findings in perceptual decision making, implicitly relies on estimates of stimulus reliability. We then show that only those variants of the drift diffusion model which allow stimulus-specific reliabilities are consistent with neurophysiological findings. Our analysis suggests that the brain estimates the reliability of the stimulus on a short time scale of at most a few hundred milliseconds.

In many learning problems, ranging from clustering to ranking through metric learning, empirical estimates of the risk functional consist of an average over tuples (e.g., pairs or triplets) of observations, rather than over individual observations. In this paper, we focus on how to best implement a stochastic approximation approach to solve such risk minimization problems. We argue that in the large-scale setting, gradient estimates should be obtained by sampling tuples of data points with replacement (incomplete U-statistics) instead of sampling data points without replacement (complete U-statistics based on subsamples). We develop a theoretical framework accounting for the substantial impact of this strategy on the generalization ability of the prediction model returned by the Stochastic Gradient Descent (SGD) algorithm. It reveals that the method we promote achieves a much better trade-off between statistical accuracy and computational cost. Beyond the rate bound analysis, experiments on AUC maximization and metric learning provide strong empirical evidence of the superiority of the proposed approach.

To predict sensory inputs or control motor trajectories, the brain must constantly learn temporal dynamics based on error feedback. However, it remains unclear how such supervised learning is implemented in biological neural networks. Learning in recurrent spiking networks is notoriously difficult because local changes in connectivity may have an unpredictable effect on the global dynamics. The most commonly used learning rules, such as temporal back-propagation, are not local and thus not biologically plausible. Furthermore, reproducing the Poisson-like statistics of neural responses requires the use of networks with balanced excitation and inhibition. Such balance is easily destroyed during learning. Using a top-down approach, we show how networks of integrate-and-fire neurons can learn arbitrary linear dynamical systems by feeding back their error as a feed-forward input. The network uses two types of recurrent connections: fast and slow. The fast connections learn to balance excitation and inhibition using a voltage-based plasticity rule. The slow connections are trained to minimize the error feedback using a current-based Hebbian learning rule. Importantly, the balance maintained by fast connections is crucial to ensure that global error signals are available locally in each neuron, in turn resulting in a local learning rule for the slow connections. This demonstrates that spiking networks can learn complex dynamics using purely local learning rules, using E/I balance as the key rather than an additional constraint. The resulting network implements a given function within the predictive coding scheme, with minimal dimensions and activity.

Precision-Recall analysis abounds in applications of binary classification where true negatives do not add value and hence should not affect assessment of the classifier's performance. Perhaps inspired by the many advantages of receiver operating characteristic (ROC) curves and the area under such curves for accuracy-based performance assessment, many researchers have taken to report Precision-Recall (PR) curves and associated areas as performance metric. We demonstrate in this paper that this practice is fraught with difficulties, mainly because of incoherent scale assumptions -- e.g., the area under a PR curve takes the arithmetic mean of precision values whereas the $F_{\beta}$ score applies the harmonic mean. We show how to fix this by plotting PR curves in a different coordinate system, and demonstrate that the new Precision-Recall-Gain curves inherit all key advantages of ROC curves. In particular, the area under Precision-Recall-Gain curves conveys an expected $F_1$ score on a harmonic scale, and the convex hull of a Precision-Recall-Gain curve allows us to calibrate the classifier's scores so as to determine, for each operating point on the convex hull, the interval of $\beta$ values for which the point optimises $F_{\beta}$. We demonstrate experimentally that the area under traditional PR curves can easily favour models with lower expected $F_1$ score than others, and so the use of Precision-Recall-Gain curves will result in better model selection.