Asia
Leaf vein segmentation using Odd Gabor filters and morphological operations
Leaf vein forms the basis of leaf characterization and classification. Different species have different leaf vein patterns. It is seen that leaf vein segmentation will help in maintaining a record of all the leaves according to their specific pattern of veins thus provide an effective way to retrieve and store information regarding various plant species in database as well as provide an effective means to characterize plants on the basis of leaf vein structure which is unique for every species. The algorithm proposes a new way of segmentation of leaf veins with the use of Odd Gabor filters and the use of morphological operations for producing a better output. The Odd Gabor filter gives an efficient output and is robust and scalable as compared with the existing techniques as it detects the fine fiber like veins present in leaves much more efficiently.
Algorithms for Generating Ordered Solutions for Explicit AND/OR Structures
Ghosh, P., Sharma, A., Chakrabarti, P.P., Dasgupta, P.
We present algorithms for generating alternative solutions for explicit acyclic AND/OR structures in non-decreasing order of cost. The proposed algorithms use a best first search technique and report the solutions using an implicit representation ordered by cost. In this paper, we present two versions of the search algorithm -- (a) an initial version of the best first search algorithm, ASG, which may present one solution more than once while generating the ordered solutions, and (b) another version, LASG, which avoids the construction of the duplicate solutions. The actual solutions can be reconstructed quickly from the implicit compact representation used. We have applied the methods on a few test domains, some of them are synthetic while the others are based on well known problems including the search space of the 5-peg Tower of Hanoi problem, the matrix-chain multiplication problem and the problem of finding secondary structure of RNA. Experimental results show the efficacy of the proposed algorithms over the existing approach. Our proposed algorithms have potential use in various domains ranging from knowledge based frameworks to service composition, where the AND/OR structure is widely used for representing problems.
Template Based Inference in Symmetric Relational Markov Random Fields
Jaimovich, Ariel, Meshi, Ofer, Friedman, Nir
Relational Markov Random Fields are a general and flexible framework for reasoning about the joint distribution over attributes of a large number of interacting entities. The main computational difficulty in learning such models is inference. Even when dealing with complete data, where one can summarize a large domain by sufficient statistics, learning requires one to compute the expectation of the sufficient statistics given different parameter choices. The typical solution to this problem is to resort to approximate inference procedures, such as loopy belief propagation. Although these procedures are quite efficient, they still require computation that is on the order of the number of interactions (or features) in the model. When learning a large relational model over a complex domain, even such approximations require unrealistic running time. In this paper we show that for a particular class of relational MRFs, which have inherent symmetry, we can perform the inference needed for learning procedures using a template-level belief propagation. This procedure's running time is proportional to the size of the relational model rather than the size of the domain. Moreover, we show that this computational procedure is equivalent to sychronous loopy belief propagation. This enables a dramatic speedup in inference and learning time. We use this procedure to learn relational MRFs for capturing the joint distribution of large protein-protein interaction networks.
Ranking Under Uncertainty
Zuk, Or, Ein-Dor, Liat, Domany, Eytan
Ranking objects is a simple and natural procedure for organizing data. It is often performed by assigning a quality score to each object according to its relevance to the problem at hand. Ranking is widely used for object selection, when resources are limited and it is necessary to select a subset of most relevant objects for further processing. In real world situations, the object's scores are often calculated from noisy measurements, casting doubt on the ranking reliability. We introduce an analytical method for assessing the influence of noise levels on the ranking reliability. We use two similarity measures for reliability evaluation, Top-K-List overlap and Kendall's tau measure, and show that the former is much more sensitive to noise than the latter. We apply our method to gene selection in a series of microarray experiments of several cancer types. The results indicate that the reliability of the lists obtained from these experiments is very poor, and that experiment sizes which are necessary for attaining reasonably stable Top-K-Lists are much larger than those currently available. Simulations support our analytical results.
Evaluation of the Causal Effect of Control Plans in Nonrecursive Structural Equation Models
When observational data is available from practical studies and a directed cyclic graph for how various variables affect each other is known based on substantive understanding of the process, we consider a problem in which a control plan of a treatment variable is conducted in order to bring a response variable close to a target value with variation reduction. We formulate an optimal control plan concerning a certain treatment variable through path coefficients in the framework of linear nonrecursive structural equation models. Based on the formulation, we clarify the properties of causal effects when conducting a control plan. The results enable us to evaluate the effect of a control plan on the variance from observational data.
Semi-Supervised Learning of Class Balance under Class-Prior Change by Distribution Matching
Plessis, Marthinus Du, Sugiyama, Masashi
In real-world classification problems, the class balance in the training dataset does not necessarily reflect that of the test dataset, which can cause significant estimation bias. If the class ratio of the test dataset is known, instance re-weighting or resampling allows systematical bias correction. However, learning the class ratio of the test dataset is challenging when no labeled data is available from the test domain. In this paper, we propose to estimate the class ratio in the test dataset by matching probability distributions of training and test input data. We demonstrate the utility of the proposed approach through experiments.
Fast Computation of Subpath Kernel for Trees
Kimura, Daisuke, Kashima, Hisashi
The kernel method is a potential approach to analyzing structured data such as sequences, trees, and graphs; however, unordered trees have not been investigated extensively. Kimura et al. (2011) proposed a kernel function for unordered trees on the basis of their subpaths, which are vertical substructures of trees responsible for hierarchical information in them. Their kernel exhibits practically good performance in terms of accuracy and speed; however, linear-time computation is not guaranteed theoretically, unlike the case of the other unordered tree kernel proposed by Vishwanathan and Smola (2003). In this paper, we propose a theoretically guaranteed linear-time kernel computation algorithm that is practically fast, and we present an efficient prediction algorithm whose running time depends only on the size of the input tree. Experimental results show that the proposed algorithms are quite efficient in practice.
Robust PCA in High-dimension: A Deterministic Approach
Feng, Jiashi, Xu, Huan, Yan, Shuicheng
We consider principal component analysis for contaminated data-set in the high dimensional regime, where the dimensionality of each observation is comparable or even more than the number of observations. We propose a deterministic high-dimensional robust PCA algorithm which inherits all theoretical properties of its randomized counterpart, i.e., it is tractable, robust to contaminated points, easily kernelizable, asymptotic consistent and achieves maximal robustness -- a breakdown point of 50%. More importantly, the proposed method exhibits significantly better computational efficiency, which makes it suitable for large-scale real applications.
Dirichlet Process with Mixed Random Measures: A Nonparametric Topic Model for Labeled Data
Kim, Dongwoo, Kim, Suin, Oh, Alice
We describe a nonparametric topic model for labeled data. The model uses a mixture of random measures (MRM) as a base distribution of the Dirichlet process (DP) of the HDP framework, so we call it the DP-MRM. To model labeled data, we define a DP distributed random measure for each label, and the resulting model generates an unbounded number of topics for each label. We apply DP-MRM on single-labeled and multi-labeled corpora of documents and compare the performance on label prediction with MedLDA, LDA-SVM, and Labeled-LDA. We further enhance the model by incorporating ddCRP and modeling multi-labeled images for image segmentation and object labeling, comparing the performance with nCuts and rddCRP.
Dependence Maximizing Temporal Alignment via Squared-Loss Mutual Information
Yamada, Makoto, Sigal, Leonid, Raptis, Michalis, Sugiyama, Masashi
The goal of temporal alignment is to establish time correspondence between two sequences, which has many applications in a variety of areas such as speech processing, bioinformatics, computer vision, and computer graphics. In this paper, we propose a novel temporal alignment method called least-squares dynamic time warping (LSDTW). LSDTW finds an alignment that maximizes statistical dependency between sequences, measured by a squared-loss variant of mutual information. The benefit of this novel information-theoretic formulation is that LSDTW can align sequences with different lengths, different dimensionality, high non-linearity, and non-Gaussianity in a computationally efficient manner. In addition, model parameters such as an initial alignment matrix can be systematically optimized by cross-validation. We demonstrate the usefulness of LSDTW through experiments on synthetic and real-world Kinect action recognition datasets.