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Ontology Reasoning with Deep Neural Networks

Journal of Artificial Intelligence Research

The ability to conduct logical reasoning is a fundamental aspect of intelligent human behavior, and thus an important problem along the way to human-level artificial intelligence. Traditionally, logic-based symbolic methods from the field of knowledge representation and reasoning have been used to equip agents with capabilities that resemble human logical reasoning qualities. More recently, however, there has been an increasing interest in using machine learning rather than logic-based symbolic formalisms to tackle these tasks. In this paper, we employ state-of-the-art methods for training deep neural networks to devise a novel model that is able to learn how to effectively perform logical reasoning in the form of basic ontology reasoning. This is an important and at the same time very natural logical reasoning task, which is why the presented approach is applicable to a plethora of important real-world problems. We present the outcomes of several experiments, which show that our model is able to learn to perform highly accurate ontology reasoning on very large, diverse, and challenging benchmarks. Furthermore, it turned out that the suggested approach suffers much less from different obstacles that prohibit logic-based symbolic reasoning, and, at the same time, is surprisingly plausible from a biological point of view.


Learning from Data to Optimize Control in Precision Farming

arXiv.org Machine Learning

Precision farming is one way of many to meet a 70 percent increase in global demand for agricultural products on current agricultural land by 2050 at reduced need of fertilizers and efficient use of water resources. The catalyst for the emergence of precision farming has been satellite positioning and navigation followed by Internet-of-Things, generating vast information that can be used to optimize farming processes in real-time. Statistical tools from data mining, predictive modeling, and machine learning analyze pattern in historical data, to make predictions about future events as well as intelligent actions. This special issue presents the latest development in statistical inference, machine learning and optimum control for precision farming.


Robust Multi-Agent Multi-Armed Bandits

arXiv.org Machine Learning

There has been recent interest in collaborative multi-agent bandits, where groups of agents share recommendations to decrease per-agent regret. However, these works assume that each agent always recommends their individual best-arm estimates to other agents, which is unrealistic in envisioned applications (machine faults in distributed computing or spam in social recommendation systems). Hence, we generalize the setting to include honest and malicious agents who recommend best-arm estimates and arbitrary arms, respectively. We show that even with a single malicious agent, existing collaboration-based algorithms fail to improve regret guarantees over a single-agent baseline. We propose a scheme where honest agents learn who is malicious and dynamically reduce communication with them, i.e., "blacklist" them. We show that collaboration indeed decreases regret for this algorithm, when the number of malicious agents is small compared to the number of arms, and crucially without assumptions on the malicious agents' behavior. Thus, our algorithm is robust against any malicious recommendation strategy.


GraphOpt: Learning Optimization Models of Graph Formation

arXiv.org Machine Learning

Formation mechanisms are fundamental to the study of complex networks, but learning them from observations is challenging. In real-world domains, one often has access only to the final constructed graph, instead of the full construction process, and observed graphs exhibit complex structural properties. In this work, we propose GraphOpt, an end-to-end framework that jointly learns an implicit model of graph structure formation and discovers an underlying optimization mechanism in the form of a latent objective function. The learned objective can serve as an explanation for the observed graph properties, thereby lending itself to transfer across different graphs within a domain. GraphOpt poses link formation in graphs as a sequential decision-making process and solves it using maximum entropy inverse reinforcement learning algorithm. Further, it employs a novel continuous latent action space that aids scalability. Empirically, we demonstrate that GraphOpt discovers a latent objective transferable across graphs with different characteristics. GraphOpt also learns a robust stochastic policy that achieves competitive link prediction performance without being explicitly trained on this task and further enables construction of graphs with properties similar to those of the observed graph.


Gradient Descent Converges to Ridgelet Spectrum

arXiv.org Machine Learning

Deep learning achieves a high generalization performance in practice, despite the non-convexity of the gradient descent learning problem. Recently, the inductive bias in deep learning has been studied through the characterization of local minima. In this study, we show that the distribution of parameters learned by gradient descent converges to a spectrum of the ridgelet transform based on a ridgelet analysis, which is a wavelet-like analysis developed for neural networks. This convergence is stronger than those shown in previous results, and guarantees the shape of the parameter distribution has been identified with the ridgelet spectrum. In numerical experiments with finite models, we visually confirm the resemblance between the distribution of learned parameters and the ridgelet spectrum. Our study provides a better understanding of the theoretical background of an inductive bias theory based on lazy regimes.


C2G-Net: Exploiting Morphological Properties for Image Classification

arXiv.org Machine Learning

In this paper we propose C2G-Net, a pipeline for image classification that exploits the morphological properties of images containing a large number of similar objects like biological cells. C2G-Net consists of two components: (1) Cell2Grid, an image compression algorithm that identifies objects using segmentation and arranges them on a grid, and (2) DeepLNiNo, a CNN architecture with less than 10,000 trainable parameters aimed at facilitating model interpretability. To test the performance of C2G-Net we used multiplex immunohistochemistry images for predicting relapse risk in colon cancer. Compared to conventional CNN architectures trained on raw images, C2G-Net achieved similar prediction accuracy while training time was reduced by 85% and its model was is easier to interpret.


Divide-and-Shuffle Synchronization for Distributed Machine Learning

arXiv.org Machine Learning

Distributed Machine Learning suffers from the bottleneck of synchronization to all-reduce workers' updates. Previous works mainly consider better network topology, gradient compression, or stale updates to speed up communication and relieve the bottleneck. However, all these works ignore the importance of reducing the scale of synchronized elements and inevitable serial executed operators. To address the problem, our work proposes the Divide-and-Shuffle Synchronization(DS-Sync), which divides workers into several parallel groups and shuffles group members. DS-Sync only synchronizes the workers in the same group so that the scale of a group is much smaller. The shuffle of workers maintains the algorithm's convergence speed, which is interpreted in theory. Comprehensive experiments also show the significant improvements in the latest and popular models like Bert, WideResnet, and DeepFM on challenging datasets.


ASGN: An Active Semi-supervised Graph Neural Network for Molecular Property Prediction

arXiv.org Machine Learning

Molecular property prediction (e.g., energy) is an essential problem in chemistry and biology. Unfortunately, many supervised learning methods usually suffer from the problem of scarce labeled molecules in the chemical space, where such property labels are generally obtained by Density Functional Theory (DFT) calculation which is extremely computational costly. An effective solution is to incorporate the unlabeled molecules in a semi-supervised fashion. However, learning semi-supervised representation for large amounts of molecules is challenging, including the joint representation issue of both molecular essence and structure, the conflict between representation and property leaning. Here we propose a novel framework called Active Semi-supervised Graph Neural Network (ASGN) by incorporating both labeled and unlabeled molecules. Specifically, ASGN adopts a teacher-student framework. In the teacher model, we propose a novel semi-supervised learning method to learn general representation that jointly exploits information from molecular structure and molecular distribution. Then in the student model, we target at property prediction task to deal with the learning loss conflict. At last, we proposed a novel active learning strategy in terms of molecular diversities to select informative data during the whole framework learning. We conduct extensive experiments on several public datasets. Experimental results show the remarkable performance of our ASGN framework.


Enhancing SAT solvers with glue variable predictions

arXiv.org Artificial Intelligence

Modern SAT solvers routinely operate at scales that make it impractical to query a neural network for every branching decision. NeuroCore, proposed by Selsam and Bjorner, offered a proof-of-concept that neural networks can still accelerate SAT solvers by only periodically refocusing a score-based branching heuristic. However, that work suffered from several limitations: their modified solvers require GPU acceleration, further ablations showed that they were no better than a random baseline on the SATCOMP 2018 benchmark, and their training target of unsat cores required an expensive data pipeline which only labels relatively easy unsatisfiable problems. We address all these limitations, using a simpler network architecture allowing CPU inference for even large industrial problems with millions of clauses, and training instead to predict {\em glue variables}---a target for which it is easier to generate labelled data, and which can also be formulated as a reinforcement learning task. We demonstrate the effectiveness of our approach by modifying the state-of-the-art SAT solver CaDiCaL, improving its performance on SATCOMP 2018 and SATRACE 2019 with supervised learning and its performance on a dataset of SHA-1 preimage attacks with reinforcement learning.


INT: An Inequality Benchmark for Evaluating Generalization in Theorem Proving

arXiv.org Artificial Intelligence

In learning-assisted theorem proving, one of the most critical challenges is to generalize to theorems unlike those seen at training time. In this paper, we introduce INT, an INequality Theorem proving benchmark, specifically designed to test agents' generalization ability. INT is based on a procedure for generating theorems and proofs; this procedure's knobs allow us to measure 6 different types of generalization, each reflecting a distinct challenge characteristic of automated theorem proving. In addition, unlike prior benchmarks for learning-assisted theorem proving, INT provides a lightweight and user-friendly theorem proving environment with fast simulations, conducive to performing learning-based and search-based research. We introduce learning-based baselines and evaluate them across 6 dimensions of generalization with the benchmark. We then evaluate the same agents augmented with Monte Carlo Tree Search (MCTS) at test time, and show that MCTS can help to prove new theorems.