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Origins and genetic legacy of prehistoric dogs

Science

Dogs were the first domesticated animal, likely originating from human-associated wolves, but their origin remains unclear. Bergstrom et al. sequenced 27 ancient dog genomes from multiple locations near to and corresponding in time to comparable human ancient DNA sites (see the Perspective by Pavlidis and Somel). By analyzing these genomes, along with other ancient and modern dog genomes, the authors found that dogs likely arose once from a now-extinct wolf population. They also found that at least five different dog populations ∼10,000 years before the present show replacement in Europe at later dates. Furthermore, some dog population genetics are similar to those of humans, whereas others differ, inferring a complex ancestral history for humanity's best friend. Science , this issue p. [557][1]; see also p. [522][2] Dogs were the first domestic animal, but little is known about their population history and to what extent it was linked to humans. We sequenced 27 ancient dog genomes and found that all dogs share a common ancestry distinct from present-day wolves, with limited gene flow from wolves since domestication but substantial dog-to-wolf gene flow. By 11,000 years ago, at least five major ancestry lineages had diversified, demonstrating a deep genetic history of dogs during the Paleolithic. Coanalysis with human genomes reveals aspects of dog population history that mirror humans, including Levant-related ancestry in Africa and early agricultural Europe. Other aspects differ, including the impacts of steppe pastoralist expansions in West and East Eurasia and a near-complete turnover of Neolithic European dog ancestry. [1]: /lookup/doi/10.1126/science.aba9572 [2]: /lookup/doi/10.1126/science.abe7823


The Next Generation Of Artificial Intelligence (Part 2)

#artificialintelligence

Deep learning pioneer Yoshua Bengio has provocative ideas about the future of AI. For the first part of this article series, see here. It has only been 8 years since the modern era of deep learning began at the 2012 ImageNet competition. Progress in the field since then has been breathtaking and relentless. If anything, this breakneck pace is only accelerating. Five years from now, the field of AI will look very different than it does today.


The Next Generation Of Artificial Intelligence (Part 2)

#artificialintelligence

For the first part of this article series, see here. It has only been 8 years since the modern era of deep learning began at the 2012 ImageNet competition. Progress in the field since then has been breathtaking and relentless. If anything, this breakneck pace is only accelerating. Five years from now, the field of AI will look very different than it does today. Methods that are currently considered cutting-edge will have become outdated; methods that today are nascent or on the fringes will be mainstream.


Envisioning Technology's Role in Future Elections - Connected World

#artificialintelligence

The 2020 presidential election in the United States is just around the corner. This year, the election has been particularly controversial in part because of the ongoing COVID-19 pandemic and the restrictions the virus has placed on in-person gatherings. In a world in which connected devices and IoT (Internet of Things) technologies have enabled everything from autonomous vehicles to robotic surgery, it seems like there should be other options for casting votes besides sending paper ballots in by mail or turning them in by hand. However, concerns (both legitimate and overblown) about election-outcome accuracy and voter privacy have held the election process back in many ways from the digital revolution that has permeated almost everything else. Will 2020 be a pivotal year in changing how the American people and "the powers that be" feel about advancing the voting process?


Huawei investigates the future of healthcare technology for developing countries

#artificialintelligence

Huawei's TECH4ALL initiative aims to ensure nobody is left behind in the digital world by encouraging digital inclusion programmes and empowering technology adoption globally. The project is similar to some of the work happening within academia across Europe, where research projects are focused on harnessing technology for societal good. Professor van Ginneken, Professor of Medical Image Analysis at Radboud University Medical Centre in The Netherlands, is introducing digitized healthcare solutions to developing countries and believes that in ten years' time, all hospital pathology departments will be digitized. When did your work in medical imaging begin? I studied physics and completed a PhD in medical image analysis in 1996, developing computer programs that analyse chest x-rays using artificial intelligence (AI). At the end of the 1990s we wanted to put digital chest x-ray units with AI software in countries where there was a lot of tuberculosis, because it accommodates faster, more widespread screening, without the need to develop images on film.


Artificial Intelligence Initiative: Bank of Thailand - Central Banking

#artificialintelligence

With an esteemed line-up of international speakers, drawn from across Europe, Asia and the Middle East, the forum will inform and provide insight to all participants during the one-day programme.


How Eugenics Shaped Statistics - Issue 92: Frontiers

Nautilus

In early 2018, officials at University College London were shocked to learn that meetings organized by "race scientists" and neo-Nazis, called the London Conference on Intelligence, had been held at the college the previous four years. The existence of the conference was surprising, but the choice of location was not. UCL was an epicenter of the early 20th-century eugenics movement--a precursor to Nazi "racial hygiene" programs--due to its ties to Francis Galton, the father of eugenics, and his intellectual descendants and fellow eugenicists Karl Pearson and Ronald Fisher. In response to protests over the conference, UCL announced this June that it had stripped Galton's and Pearson's names from its buildings and classrooms. After similar outcries about eugenics, the Committee of Presidents of Statistical Societies renamed its annual Fisher Lecture, and the Society for the Study of Evolution did the same for its Fisher Prize. In science, these are the equivalents of toppling a Confederate statue and hurling it into the sea. Unlike tearing down monuments to white supremacy in the American South, purging statistics of the ghosts of its eugenicist past is not a straightforward proposition. In this version, it's as if Stonewall Jackson developed quantum physics. What we now understand as statistics comes largely from the work of Galton, Pearson, and Fisher, whose names appear in bread-and-butter terms like "Pearson correlation coefficient" and "Fisher information." In particular, the beleaguered concept of "statistical significance," for decades the measure of whether empirical research is publication-worthy, can be traced directly to the trio. Ideally, statisticians would like to divorce these tools from the lives and times of the people who created them. It would be convenient if statistics existed outside of history, but that's not the case.


IoT Platform for COVID-19 Prevention and Control: A Survey

arXiv.org Artificial Intelligence

As a result of the worldwide transmission of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), coronavirus disease 2019 (COVID-19) has evolved into an unprecedented pandemic. Currently, with unavailable pharmaceutical treatments and vaccines, this novel coronavirus results in a great impact on public health, human society, and global economy, which is likely to last for many years. One of the lessons learned from the COVID-19 pandemic is that a long-term system with non-pharmaceutical interventions for preventing and controlling new infectious diseases is desirable to be implemented. Internet of things (IoT) platform is preferred to be utilized to achieve this goal, due to its ubiquitous sensing ability and seamless connectivity. IoT technology is changing our lives through smart healthcare, smart home, and smart city, which aims to build a more convenient and intelligent community. This paper presents how the IoT could be incorporated into the epidemic prevention and control system. Specifically, we demonstrate a potential fog-cloud combined IoT platform that can be used in the systematic and intelligent COVID-19 prevention and control, which involves five interventions including COVID-19 Symptom Diagnosis, Quarantine Monitoring, Contact Tracing & Social Distancing, COVID-19 Outbreak Forecasting, and SARS-CoV-2 Mutation Tracking. We investigate and review the state-of-the-art literatures of these five interventions to present the capabilities of IoT in countering against the current COVID-19 pandemic or future infectious disease epidemics.


Performance Indicators Contributing To Success At The Group And Play-Off Stages Of The 2019 Rugby World Cup

arXiv.org Artificial Intelligence

Performance indicators that contributed to success at the group stage and play-off stages of the 2019 Rugby World Cup were analysed using publicly available data obtained from the official tournament website using both a non-parametric statistical technique, Wilcoxon's signed rank test, and a decision rules technique from machine learning called RIPPER. Our statistical results found that ball carry effectiveness (percentage of ball carries that penetrated the opposition gain-line) and total metres gained (kick metres plus carry metres) were found to contribute to success at both stages of the tournament and that indicators that contributed to success during the group stages (dominating possession, making more ball carries, making more passes, winning more rucks, and making less tackles) did not contribute to success at the play-off stage. Our results using RIPPER found that low ball carries and a low lineout success percentage jointly contributed to losing at the group stage, while winning a low number of rucks and carrying over the gain-line a sufficient number of times contributed to winning at the play-off stage of the tournament. The results emphasise the need for teams to adapt their playing strategies from the group stage to the play-off stage at tournament in order to be successful.


Tensor Completion via Tensor Networks with a Tucker Wrapper

arXiv.org Machine Learning

In recent years, low-rank tensor completion (LRTC) has received considerable attention due to its applications in image/video inpainting, hyperspectral data recovery, etc. With different notions of tensor rank (e.g., CP, Tucker, tensor train/ring, etc.), various optimization based numerical methods are proposed to LRTC. However, tensor network based methods have not been proposed yet. In this paper, we propose to solve LRTC via tensor networks with a Tucker wrapper. Here by "Tucker wrapper" we mean that the outermost factor matrices of the tensor network are all orthonormal. We formulate LRTC as a problem of solving a system of nonlinear equations, rather than a constrained optimization problem. A two-level alternative least square method is then employed to update the unknown factors. The computation of the method is dominated by tensor matrix multiplications and can be efficiently performed. Also, under proper assumptions, it is shown that with high probability, the method converges to the exact solution at a linear rate. Numerical simulations show that the proposed algorithm is comparable with state-of-the-art methods.