Efficient Bayesian analysis of multiple changepoint models with dependence across segments

arXiv.org Machine Learning

We consider Bayesian analysis of a class of multiple changepoint models. While there are a variety of efficient ways to analyse these models if the parameters associated with each segment are independent, there are few general approaches for models where the parameters are dependent. Under the assumption that the dependence is Markov, we propose an efficient online algorithm for sampling from an approximation to the posterior distribution of the number and position of the changepoints. In a simulation study, we show that the approximation introduced is negligible. We illustrate the power of our approach through fitting piecewise polynomial models to data, under a model which allows for either continuity or discontinuity of the underlying curve at each changepoint. This method is competitive with, or out-performs, other methods for inferring curves from noisy data; and uniquely it allows for inference of the locations of discontinuities in the underlying curve.

Thompson Sampling Based Monte-Carlo Planning in POMDPs

AAAI Conferences

Monte-Carlo tree search (MCTS) has been drawing great interest in recent years for planning under uncertainty. One of the key challenges is the trade-off between exploration and exploitation. To address this, we introduce a novel online planning algorithm for large POMDPs using Thompson sampling based MCTS that balances between cumulative and simple regrets. The proposed algorithm  Dirichlet-Dirichlet-NormalGamma based Partially Observable Monte-Carlo Planning (D 2 NG-POMCP) treats the accumulated reward of performing an action from a belief state in the MCTS search tree as a random variable following an unknown distribution with hidden parameters. Bayesian method is used to model and infer the posterior distribution of these parameters by choosing the conjugate prior in the form of a combination of two Dirichlet and one NormalGamma distributions. Thompson sampling is exploited to guide the action selection in the search tree. Experimental results confirmed that our algorithm outperforms the state-of-the-art approaches on several common benchmark problems.

Sharing Features among Dynamical Systems with Beta Processes

Neural Information Processing Systems

We propose a Bayesian nonparametric approach to relating multiple time series via a set of latent, dynamical behaviors. Using a beta process prior, we allow data-driven selection of the size of this set, as well as the pattern with which behaviors are shared among time series. Via the Indian buffet process representation of the beta process predictive distributions, we develop an exact Markov chain Monte Carlo inference method. In particular, our approach uses the sum-product algorithm to efficiently compute Metropolis-Hastings acceptance probabilities, and explores new dynamical behaviors via birth/death proposals. We validate our sampling algorithm using several synthetic datasets, and also demonstrate promising unsupervised segmentation of visual motion capture data.

Bayesian Model Scoring in Markov Random Fields

Neural Information Processing Systems

Scoring structures of undirected graphical models by means of evaluating the marginal likelihood is very hard. The main reason is the presence of the partition functionwhich is intractable to evaluate, let alone integrate over. We propose to approximate the marginal likelihood by employing two levels of approximation: we assume normality of the posterior (the Laplace approximation) and approximate allremaining intractable quantities using belief propagation and the linear response approximation.

Bayesian Non-Homogeneous Markov Models via Polya-Gamma Data Augmentation with Applications to Rainfall Modeling

arXiv.org Machine Learning

Discrete-time hidden Markov models are a broadly useful class of latent-variable models with applications in areas such as speech recognition, bioinformatics, and climate data analysis. It is common in practice to introduce temporal non-homogeneity into such models by making the transition probabilities dependent on time-varying exogenous input variables via a multinomial logistic parametrization. We extend such models to introduce additional non-homogeneity into the emission distribution using a generalized linear model (GLM), with data augmentation for sampling-based inference. However, the presence of the logistic function in the state transition model significantly complicates parameter inference for the overall model, particularly in a Bayesian context. To address this we extend the recently-proposed Polya-Gamma data augmentation approach to handle non-homogeneous hidden Markov models (NHMMs), allowing the development of an efficient Markov chain Monte Carlo (MCMC) sampling scheme. We apply our model and inference scheme to 30 years of daily rainfall in India, leading to a number of insights into rainfall-related phenomena in the region. Our proposed approach allows for fully Bayesian analysis of relatively complex NHMMs on a scale that was not possible with previous methods. Software implementing the methods described in the paper is available via the R package NHMM.