Variational Bayesian Monte Carlo

Neural Information Processing Systems

Many probabilistic models of interest in scientific computing and machine learning have expensive, black-box likelihoods that prevent the application of standard techniques for Bayesian inference, such as MCMC, which would require access to the gradient or a large number of likelihood evaluations. We introduce here a novel sample-efficient inference framework, Variational Bayesian Monte Carlo (VBMC). VBMC combines variational inference with Gaussian-process based, active-sampling Bayesian quadrature, using the latter to efficiently approximate the intractable integral in the variational objective. Our method produces both a nonparametric approximation of the posterior distribution and an approximate lower bound of the model evidence, useful for model selection. We demonstrate VBMC both on several synthetic likelihoods and on a neuronal model with data from real neurons. Across all tested problems and dimensions (up to D = 10), VBMC performs consistently well in reconstructing the posterior and the model evidence with a limited budget of likelihood evaluations, unlike other methods that work only in very low dimensions. Our framework shows great promise as a novel tool for posterior and model inference with expensive, black-box likelihoods.


Variational Bayesian Monte Carlo

Neural Information Processing Systems

Many probabilistic models of interest in scientific computing and machine learning have expensive, black-box likelihoods that prevent the application of standard techniques for Bayesian inference, such as MCMC, which would require access to the gradient or a large number of likelihood evaluations. We introduce here a novel sample-efficient inference framework, Variational Bayesian Monte Carlo (VBMC). VBMC combines variational inference with Gaussian-process based, active-sampling Bayesian quadrature, using the latter to efficiently approximate the intractable integral in the variational objective. Our method produces both a nonparametric approximation of the posterior distribution and an approximate lower bound of the model evidence, useful for model selection. We demonstrate VBMC both on several synthetic likelihoods and on a neuronal model with data from real neurons. Across all tested problems and dimensions (up to D = 10), VBMC performs consistently well in reconstructing the posterior and the model evidence with a limited budget of likelihood evaluations, unlike other methods that work only in very low dimensions. Our framework shows great promise as a novel tool for posterior and model inference with expensive, black-box likelihoods.


Variational Bayesian Monte Carlo

arXiv.org Machine Learning

Many probabilistic models of interest in scientific computing and machine learning have expensive, black-box likelihoods that prevent the application of standard techniques for Bayesian inference, such as MCMC, which would require access to the gradient or a large number of likelihood evaluations. We introduce here a novel sample-efficient inference framework, Variational Bayesian Monte Carlo (VBMC). VBMC combines variational inference with Gaussian-process based, active-sampling Bayesian quadrature, using the latter to efficiently approximate the intractable integral in the variational objective. Our method produces both a nonparametric approximation of the posterior distribution and an approximate lower bound of the model evidence, useful for model selection. We demonstrate VBMC both on several synthetic likelihoods and on a neuronal model with data from real neurons. Across all tested problems and dimensions (up to $D = 10$), VBMC performs consistently well in reconstructing the posterior and the model evidence with a limited budget of likelihood evaluations, unlike other methods that work only in very low dimensions. Our framework shows great promise as a novel tool for posterior and model inference with expensive, black-box likelihoods.


Quality of Uncertainty Quantification for Bayesian Neural Network Inference

arXiv.org Machine Learning

Bayesian Neural Networks (BNNs) place priors There exists a large body of work to improve the quality of over the parameters in a neural network. Inference inference for Bayesian neural networks (BNNs) by improving in BNNs, however, is difficult; all inference the approximate inference procedure (e.g. Graves 2011; methods for BNNs are approximate. In this work, Blundell et al. 2015; Hernández-Lobato et al. 2016, to name we empirically compare the quality of predictive a few), or by improving the flexibility of the variational uncertainty estimates for 10 common inference approximation for variational inference (e.g.


Extended and Unscented Gaussian Processes

Neural Information Processing Systems

Inference is based on a variational framework where a Gaussian posterior is assumed and the likelihood is linearized about the variational posterior mean using either a Taylor series expansion or statistical linearization. We show that the parameter updates obtained by these algorithms are equivalent to the state update equations in the iterative extended and unscented Kalman filters respectively, hence we refer to our algorithms as extended and unscented GPs. The unscented GP treats the likelihood as a'black-box' by not requiring its derivative for inference, so it also applies to non-differentiable likelihood models. We evaluate the performance of our algorithms on a number of synthetic inversion problems and a binary classification dataset. Papers published at the Neural Information Processing Systems Conference.