Collaborating Authors

A Bayesian Graphical Model to Discover Latent Events from Twitter

AAAI Conferences

Online social networks like Twitter and Facebook produce an overwhelming amount of information every day. However, research suggests that much of this content focuses on a reasonably sized set of ongoing events or topics that are both temporally and geographically situated. These patterns are especially observable when the data that is generated contains geospatial information, usually generated by a location enabled device such as a smartphone. In this paper, we consider a data set of 1.4 million geo-tagged tweets from a country during a large social movement, where social events and demonstrations occurred frequently. We use a probabilistic graphical model to discover these events within the data in a way that informs us of their spatial, temporal and topical focus. Quantitative analysis suggests that the streaming algorithm proposed in the paper uncovers both well-known events and lesser-known but important events that occurred within the timeframe of the dataset. In addition, the model can be used to predict the location and time of texts that do not have these pieces of information, which accounts for the much of the data on the web.

Joint Gaussian Graphical Model Estimation: A Survey Machine Learning

Graphs from complex systems often share a partial underlying structure across domains while retaining individual features. Thus, identifying common structures can shed light on the underlying signal, for instance, when applied to scientific discoveries or clinical diagnoses. Furthermore, growing evidence shows that the shared structure across domains boosts the estimation power of graphs, particularly for high-dimensional data. However, building a joint estimator to extract the common structure may be more complicated than it seems, most often due to data heterogeneity across sources. This manuscript surveys recent work on statistical inference of joint Gaussian graphical models, identifying model structures that fit various data generation processes. Simulations under different data generation processes are implemented with detailed discussions on the choice of models.

Extended Bayesian Information Criteria for Gaussian Graphical Models

Neural Information Processing Systems

Gaussian graphical models with sparsity in the inverse covariance matrix are of significant interest in many modern applications. For the problem of recovering the graphical structure, information criteria provide useful optimization objectives for algorithms searching through sets of graphs or for selection of tuning parameters of other methods such as the graphical lasso, which is a likelihood penalization technique. In this paper we establish the asymptotic consistency of an extended Bayesian information criterion for Gaussian graphical models in a scenario where both the number of variables p and the sample size n grow. Compared to earlier work on the regression case, our treatment allows for growth in the number of non-zero parameters in the true model, which is necessary in order to cover connected graphs. We demonstrate the performance of this criterion on simulated data when used in conjuction with the graphical lasso, and verify that the criterion indeed performs better than either cross-validation or the ordinary Bayesian information criterion when p and the number of non-zero parameters q both scale with n.

Bayesian Joint Estimation of Multiple Graphical Models

Neural Information Processing Systems

In this paper, we propose a novel Bayesian group regularization method based on the spike and slab Lasso priors for jointly estimating multiple graphical models. The proposed method can be used to estimate the common sparsity structure underlying the graphical models while capturing potential heterogeneity of the precision matrices corresponding to those models. Our theoretical results show that the proposed method enjoys the optimal rate of convergence in $\ell_\infty$ norm for estimation consistency and has a strong structure recovery guarantee even when the signal strengths over different graphs are heterogeneous. Through simulation studies and an application to the capital bike-sharing network data, we demonstrate the competitive performance of our method compared to existing alternatives. Papers published at the Neural Information Processing Systems Conference.

Getting started in probabilistic graphical models Machine Learning

Probabilistic graphical models (PGMs) have become a popular tool for computational analysis of biological data in a variety of domains. But, what exactly are they and how do they work? How can we use PGMs to discover patterns that are biologically relevant? And to what extent can PGMs help us formulate new hypotheses that are testable at the bench? This note sketches out some answers and illustrates the main ideas behind the statistical approach to biological pattern discovery.